RNA–Protein interactions for RNA: ENST00000523261.1

NKX3-1-202, Transcript of NK3 homeobox 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NKX3-1, Length 713 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX3-1-202ENST00000523261 SLC25A5P05141 298 aaKnown RBP8.98□□□□□ -0.97
NKX3-1-202ENST00000523261 RNASE10Q5GAN6 216 aaKnown RBP8.98□□□□□ -0.97
NKX3-1-202ENST00000523261 LCN15Q6UWW0 184 aa8.98□□□□□ -0.97
NKX3-1-202ENST00000523261 SLC50A1Q9BRV3 221 aa8.98□□□□□ -0.97
NKX3-1-202ENST00000523261 NAA60Q9H7X0 242 aa8.98□□□□□ -0.97
NKX3-1-202ENST00000523261 TP53TG3Q9ULZ0 132 aa8.98□□□□□ -0.97
NKX3-1-202ENST00000523261 BOLA1Q9Y3E2 137 aa8.98□□□□□ -0.97
NKX3-1-202ENST00000523261 TRAV8-6A0A0B4J262 113 aa8.97□□□□□ -0.97
NKX3-1-202ENST00000523261 CRYM-AS1A6NIL9 109 aa8.97□□□□□ -0.97
NKX3-1-202ENST00000523261 PRSS46E5RG02 174 aa8.97□□□□□ -0.97
NKX3-1-202ENST00000523261 SNRPCP09234 159 aaKnown RBP8.97□□□□□ -0.97
NKX3-1-202ENST00000523261 PPT1P50897 306 aa8.97□□□□□ -0.97
NKX3-1-202ENST00000523261 AQP4P55087 323 aa8.97□□□□□ -0.97
NKX3-1-202ENST00000523261 RAB11AP62491 216 aa8.97□□□□□ -0.97
NKX3-1-202ENST00000523261 ACOT7LQ6ZUV0 252 aa8.97□□□□□ -0.97
NKX3-1-202ENST00000523261 SH2D6Q7Z4S9 175 aa8.97□□□□□ -0.97
NKX3-1-202ENST00000523261 SNX29P2Q8IUI4 249 aa8.97□□□□□ -0.97
NKX3-1-202ENST00000523261 Q8N976 141 aa8.97□□□□□ -0.97
NKX3-1-202ENST00000523261 MARCH1Q8TCQ1 289 aa8.97□□□□□ -0.97
NKX3-1-202ENST00000523261 LPAP08519 4548 aa8.96□□□□□ -0.98
NKX3-1-202ENST00000523261 LOC100506127A0A0U1RQW1 187 aa8.96□□□□□ -0.98
NKX3-1-202ENST00000523261 RNF222A6NCQ9 220 aa8.96□□□□□ -0.98
NKX3-1-202ENST00000523261 KLLNB2CW77 178 aa8.96□□□□□ -0.98
NKX3-1-202ENST00000523261 SLC17A3O00476 420 aa8.96□□□□□ -0.98
NKX3-1-202ENST00000523261 HYPMO75409 117 aa8.96□□□□□ -0.98
NKX3-1-202ENST00000523261 CCR6P51684 374 aa8.96□□□□□ -0.98
NKX3-1-202ENST00000523261 CD300CQ08708 224 aa8.96□□□□□ -0.98
NKX3-1-202ENST00000523261 BTN1A1Q13410 526 aa8.96□□□□□ -0.98
NKX3-1-202ENST00000523261 OR10J3Q5JRS4 329 aa8.96□□□□□ -0.98
NKX3-1-202ENST00000523261 OR10G4Q8NGN3 311 aa8.96□□□□□ -0.98
NKX3-1-202ENST00000523261 TERB2Q8NHR7 220 aa8.96□□□□□ -0.98
NKX3-1-202ENST00000523261 BLOC1S6Q9UL45 172 aa8.96□□□□□ -0.98
NKX3-1-202ENST00000523261 MPDU1O75352 247 aa8.95□□□□□ -0.98
NKX3-1-202ENST00000523261 TNFAIP8O95379 198 aa8.95□□□□□ -0.98
NKX3-1-202ENST00000523261 CD3DP04234 171 aa8.95□□□□□ -0.98
NKX3-1-202ENST00000523261 OR5G3P0C626 314 aa8.95□□□□□ -0.98
NKX3-1-202ENST00000523261 PLP1P60201 277 aa8.95□□□□□ -0.98
NKX3-1-202ENST00000523261 SMCO1Q147U7 214 aa8.95□□□□□ -0.98
NKX3-1-202ENST00000523261 RTBDNQ9BSG5 229 aaPredicted RBP8.95□□□□□ -0.98
NKX3-1-202ENST00000523261 PAIP2BQ9ULR5 123 aaKnown RBP8.95□□□□□ -0.98
NKX3-1-202ENST00000523261 TRAV8-3A0A0A6YYJ7 113 aa8.94□□□□□ -0.98
NKX3-1-202ENST00000523261 ANXA7P20073 488 aaKnown RBP8.94□□□□□ -0.98
NKX3-1-202ENST00000523261 CYP2G1PQ6ZSU1 146 aa8.94□□□□□ -0.98
NKX3-1-202ENST00000523261 Q8N3U1 123 aa8.94□□□□□ -0.98
NKX3-1-202ENST00000523261 NHLRC2Q8NBF2 726 aa8.94□□□□□ -0.98
NKX3-1-202ENST00000523261 OR4D10Q8NGI6 311 aa8.94□□□□□ -0.98
NKX3-1-202ENST00000523261 MUC2Q02817 5179 aa8.94□□□□□ -0.98
NKX3-1-202ENST00000523261 H3BTX0 84 aa8.93□□□□□ -0.98
NKX3-1-202ENST00000523261 IL5P05113 134 aa8.93□□□□□ -0.98
NKX3-1-202ENST00000523261 LINC00869P0C866 280 aa8.93□□□□□ -0.98
NKX3-1-202ENST00000523261 IAPPP10997 89 aa8.93□□□□□ -0.98
NKX3-1-202ENST00000523261 AKR1C1Q04828 323 aa8.93□□□□□ -0.98
NKX3-1-202ENST00000523261 PATE2Q6UY27 113 aa8.93□□□□□ -0.98
NKX3-1-202ENST00000523261 CROCCP3Q8IVE0 287 aa8.93□□□□□ -0.98
NKX3-1-202ENST00000523261 OR10P1Q8NGE3 313 aa8.93□□□□□ -0.98
NKX3-1-202ENST00000523261 FAM19A4Q96LR4 140 aa8.93□□□□□ -0.98
NKX3-1-202ENST00000523261 LINC01600Q96MT4 127 aa8.93□□□□□ -0.98
NKX3-1-202ENST00000523261 PRR13Q9NZ81 148 aa8.93□□□□□ -0.98
NKX3-1-202ENST00000523261 RPH3ALQ9UNE2 315 aa8.93□□□□□ -0.98
NKX3-1-202ENST00000523261 C14orf166Q9Y224 244 aaKnown RBP8.93□□□□□ -0.98
NKX3-1-202ENST00000523261 TBPP20226 339 aa8.92□□□□□ -0.98
NKX3-1-202ENST00000523261 RNASE4P34096 147 aaKnown RBP8.92□□□□□ -0.98
NKX3-1-202ENST00000523261 SCGB2B2Q4G0G5 96 aa8.92□□□□□ -0.98
NKX3-1-202ENST00000523261 C4orf46Q504U0 113 aa8.92□□□□□ -0.98
NKX3-1-202ENST00000523261 ATP6V0E2Q8NHE4 81 aa8.92□□□□□ -0.98
NKX3-1-202ENST00000523261 ARPC5LQ9BPX5 153 aa8.92□□□□□ -0.98
NKX3-1-202ENST00000523261 PXMP4Q9Y6I8 212 aa8.92□□□□□ -0.98
NKX3-1-202ENST00000523261 IGHV1OR15-1A0A075B7D0 117 aa8.91□□□□□ -0.98
NKX3-1-202ENST00000523261 RGS13O14921 159 aa8.91□□□□□ -0.98
NKX3-1-202ENST00000523261 Q6ZQT7 251 aa8.91□□□□□ -0.98
NKX3-1-202ENST00000523261 LYZL2Q7Z4W2 148 aa8.91□□□□□ -0.98
NKX3-1-202ENST00000523261 SAT2Q96F10 170 aaPredicted RBP8.91□□□□□ -0.98
NKX3-1-202ENST00000523261 DPH3P1Q9H4G8 78 aa8.91□□□□□ -0.98
NKX3-1-202ENST00000523261 COX11Q9Y6N1 276 aa8.91□□□□□ -0.98
NKX3-1-202ENST00000523261 A0A0B4J2A0 478 aa8.9□□□□□ -0.98
NKX3-1-202ENST00000523261 SMIM31A0A1B0GVY4 71 aa8.9□□□□□ -0.98
NKX3-1-202ENST00000523261 OR4E1P0C645 316 aa8.9□□□□□ -0.98
NKX3-1-202ENST00000523261 AKR1C4P17516 323 aa8.9□□□□□ -0.98
NKX3-1-202ENST00000523261 ERCC8Q13216 396 aa8.9□□□□□ -0.98
NKX3-1-202ENST00000523261 OPCMLQ14982 345 aa8.9□□□□□ -0.98
NKX3-1-202ENST00000523261 S100A7AQ86SG5 101 aa8.9□□□□□ -0.98
NKX3-1-202ENST00000523261 RASL10AQ92737 203 aa8.9□□□□□ -0.98
NKX3-1-202ENST00000523261 ARV1Q9H2C2 271 aa8.9□□□□□ -0.98
NKX3-1-202ENST00000523261 SHPKQ9UHJ6 478 aa8.9□□□□□ -0.98
NKX3-1-202ENST00000523261 RNF24Q9Y225 148 aa8.9□□□□□ -0.98
NKX3-1-202ENST00000523261 TRAV4A0A0B4J268 109 aa8.89□□□□□ -0.99
NKX3-1-202ENST00000523261 APOA1P02647 267 aa8.89□□□□□ -0.99
NKX3-1-202ENST00000523261 TGFBR1P36897 503 aa8.89□□□□□ -0.99
NKX3-1-202ENST00000523261 GABARAPL2P60520 117 aa8.89□□□□□ -0.99
NKX3-1-202ENST00000523261 PRR9Q5T870 116 aa8.89□□□□□ -0.99
NKX3-1-202ENST00000523261 LCE2AQ5TA79 106 aaPredicted RBP8.89□□□□□ -0.99
NKX3-1-202ENST00000523261 DAZ4Q86SG3 579 aaKnown RBP8.89□□□□□ -0.99
NKX3-1-202ENST00000523261 HSD17B11Q8NBQ5 300 aa8.89□□□□□ -0.99
NKX3-1-202ENST00000523261 ARL6Q9H0F7 186 aa8.89□□□□□ -0.99
NKX3-1-202ENST00000523261 DAZ3Q9NR90 486 aaKnown RBP8.89□□□□□ -0.99
NKX3-1-202ENST00000523261 A0A0D9SG52 128 aa8.88□□□□□ -0.99
NKX3-1-202ENST00000523261 H3BQ15 152 aa8.88□□□□□ -0.99
NKX3-1-202ENST00000523261 PITX3O75364 302 aa8.88□□□□□ -0.99
NKX3-1-202ENST00000523261 GPX1P07203 203 aa8.88□□□□□ -0.99
NKX3-1-202ENST00000523261 PFN1P07737 140 aaKnown RBP8.88□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms