RNA–Protein interactions for RNA: ENST00000522796.1

HMGB4-204, Transcript of high mobility group box 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HMGB4, Length 2,505 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB4-204ENST00000522796 TEX49A0A1B0GTD5 131 aa6.5□□□□□ -1.37
HMGB4-204ENST00000522796 PEX7O00628 323 aa6.5□□□□□ -1.37
HMGB4-204ENST00000522796 MRPS12O15235 138 aaKnown RBP6.5□□□□□ -1.37
HMGB4-204ENST00000522796 P0DMU3 169 aa6.5□□□□□ -1.37
HMGB4-204ENST00000522796 FAM231AP0DMU4 169 aa6.5□□□□□ -1.37
HMGB4-204ENST00000522796 FAM231CP0DMU5 169 aa6.5□□□□□ -1.37
HMGB4-204ENST00000522796 VPREB1P12018 145 aa6.5□□□□□ -1.37
HMGB4-204ENST00000522796 COL8A2P25067 703 aa6.5□□□□□ -1.37
HMGB4-204ENST00000522796 IFI27P40305 119 aaPredicted RBP6.5□□□□□ -1.37
HMGB4-204ENST00000522796 ERVK-16P61578 105 aa6.5□□□□□ -1.37
HMGB4-204ENST00000522796 LOXL1Q08397 574 aaPredicted RBP6.5□□□□□ -1.37
HMGB4-204ENST00000522796 PGLYRP4Q96LB8 373 aa6.5□□□□□ -1.37
HMGB4-204ENST00000522796 HES7Q9BYE0 225 aa6.5□□□□□ -1.37
HMGB4-204ENST00000522796 DPH3P1Q9H4G8 78 aa6.5□□□□□ -1.37
HMGB4-204ENST00000522796 TRAV12-2A0A075B6T6 113 aa6.5□□□□□ -1.37
HMGB4-204ENST00000522796 A0A087WWL8 130 aa6.5□□□□□ -1.37
HMGB4-204ENST00000522796 WISP2O76076 250 aa6.5□□□□□ -1.37
HMGB4-204ENST00000522796 GATA1P15976 413 aaPredicted RBP6.5□□□□□ -1.37
HMGB4-204ENST00000522796 CRYGSP22914 178 aa6.5□□□□□ -1.37
HMGB4-204ENST00000522796 UBE2E1P51965 193 aa6.5□□□□□ -1.37
HMGB4-204ENST00000522796 PIGYQ3MUY2 71 aa6.5□□□□□ -1.37
HMGB4-204ENST00000522796 SFTA2Q6UW10 78 aa6.5□□□□□ -1.37
HMGB4-204ENST00000522796 TMEM92Q6UXU6 159 aa6.5□□□□□ -1.37
HMGB4-204ENST00000522796 NEXN-AS1Q8NBZ9 246 aa6.5□□□□□ -1.37
HMGB4-204ENST00000522796 UBE2E2Q96LR5 201 aa6.5□□□□□ -1.37
HMGB4-204ENST00000522796 NABP2Q9BQ15 211 aa6.5□□□□□ -1.37
HMGB4-204ENST00000522796 PRSS22Q9GZN4 317 aa6.5□□□□□ -1.37
HMGB4-204ENST00000522796 CYSTM1Q9H1C7 97 aa6.5□□□□□ -1.37
HMGB4-204ENST00000522796 NCBP2LA6PVI3 153 aaKnown RBP6.49□□□□□ -1.37
HMGB4-204ENST00000522796 NDUFC2-KCTD14E9PQ53 114 aa6.49□□□□□ -1.37
HMGB4-204ENST00000522796 ACYP1P07311 99 aa6.49□□□□□ -1.37
HMGB4-204ENST00000522796 HIST1H4AP62805 103 aaKnown RBP6.49□□□□□ -1.37
HMGB4-204ENST00000522796 DEFB121Q5J5C9 76 aa6.49□□□□□ -1.37
HMGB4-204ENST00000522796 INS-IGF2F8WCM5 200 aa6.49□□□□□ -1.37
HMGB4-204ENST00000522796 LOXL3P58215 753 aa6.49□□□□□ -1.37
HMGB4-204ENST00000522796 ASPHD1Q5U4P2 390 aa6.49□□□□□ -1.37
HMGB4-204ENST00000522796 NDUFA11Q86Y39 141 aa6.49□□□□□ -1.37
HMGB4-204ENST00000522796 VKORC1L1Q8N0U8 176 aa6.49□□□□□ -1.37
HMGB4-204ENST00000522796 SRSF12Q8WXF0 261 aaKnown RBP6.49□□□□□ -1.37
HMGB4-204ENST00000522796 FOXB1Q99853 325 aa6.49□□□□□ -1.37
HMGB4-204ENST00000522796 TCF20Q9UGU0 1960 aaKnown RBP6.49□□□□□ -1.37
HMGB4-204ENST00000522796 PGPA6NDG6 321 aa6.48□□□□□ -1.37
HMGB4-204ENST00000522796 P0C879 139 aa6.48□□□□□ -1.37
HMGB4-204ENST00000522796 ZNF883P0CG24 379 aa6.48□□□□□ -1.37
HMGB4-204ENST00000522796 HERVK_113P61574 105 aa6.48□□□□□ -1.37
HMGB4-204ENST00000522796 UBE2L3P68036 154 aaKnown RBP6.48□□□□□ -1.37
HMGB4-204ENST00000522796 LYZL4Q96KX0 146 aa6.48□□□□□ -1.37
HMGB4-204ENST00000522796 UPK3BQ9BT76 320 aa6.48□□□□□ -1.37
HMGB4-204ENST00000522796 KLF16Q9BXK1 252 aaPredicted RBP6.48□□□□□ -1.37
HMGB4-204ENST00000522796 IGKV1-6A0A0C4DH72 117 aa6.48□□□□□ -1.37
HMGB4-204ENST00000522796 SRRM4A7MD48 611 aaKnown RBP6.48□□□□□ -1.37
HMGB4-204ENST00000522796 VEGFBP49765 207 aa6.48□□□□□ -1.37
HMGB4-204ENST00000522796 LINC00643Q86TS7 51 aa6.48□□□□□ -1.37
HMGB4-204ENST00000522796 RPP25Q9BUL9 199 aaKnown RBP6.48□□□□□ -1.37
HMGB4-204ENST00000522796 ZNF492Q9P255 531 aa6.48□□□□□ -1.37
HMGB4-204ENST00000522796 A0A0C4DFX4 3053 aa6.48□□□□□ -1.37
HMGB4-204ENST00000522796 TANC2Q9HCD6 1990 aa6.48□□□□□ -1.37
HMGB4-204ENST00000522796 IGKV1D-43A0A0B4J1Z2 117 aa6.47□□□□□ -1.37
HMGB4-204ENST00000522796 TRBV10-2A0A0K0K1G8 114 aa6.47□□□□□ -1.37
HMGB4-204ENST00000522796 TCRAP04437 139 aa6.47□□□□□ -1.37
HMGB4-204ENST00000522796 SLC25A16P16260 332 aa6.47□□□□□ -1.37
HMGB4-204ENST00000522796 HOXD3P31249 432 aaPredicted RBP6.47□□□□□ -1.37
HMGB4-204ENST00000522796 MIR17HGQ75NE6 70 aa6.47□□□□□ -1.37
HMGB4-204ENST00000522796 C5orf38Q86SI9 138 aa6.47□□□□□ -1.37
HMGB4-204ENST00000522796 MDP1Q86V88 176 aa6.47□□□□□ -1.37
HMGB4-204ENST00000522796 FGFBP3Q8TAT2 258 aa6.47□□□□□ -1.37
HMGB4-204ENST00000522796 RTL8AQ9BWD3 113 aa6.47□□□□□ -1.37
HMGB4-204ENST00000522796 AGRNO00468 2067 aa6.47□□□□□ -1.37
HMGB4-204ENST00000522796 CRIP2P52943 208 aaPredicted RBP6.47□□□□□ -1.37
HMGB4-204ENST00000522796 Q6ZRU5 148 aa6.47□□□□□ -1.37
HMGB4-204ENST00000522796 SSMEM1Q8WWF3 244 aa6.47□□□□□ -1.37
HMGB4-204ENST00000522796 EMC6Q9BV81 110 aa6.47□□□□□ -1.37
HMGB4-204ENST00000522796 AMMECR1Q9Y4X0 333 aaPredicted RBP6.47□□□□□ -1.37
HMGB4-204ENST00000522796 IGLV2-14P01704 120 aa6.46□□□□□ -1.37
HMGB4-204ENST00000522796 NPC2P61916 151 aa6.46□□□□□ -1.37
HMGB4-204ENST00000522796 ATXN8Q156A1 80 aa6.46□□□□□ -1.37
HMGB4-204ENST00000522796 FOXL2NBQ6ZUU3 175 aa6.46□□□□□ -1.37
HMGB4-204ENST00000522796 PLXDC1Q8IUK5 500 aa6.46□□□□□ -1.37
HMGB4-204ENST00000522796 C17orf77Q96MU5 243 aa6.46□□□□□ -1.37
HMGB4-204ENST00000522796 U3KQK5 164 aa6.46□□□□□ -1.37
HMGB4-204ENST00000522796 ADAMTS9Q9P2N4 1935 aa6.46□□□□□ -1.38
HMGB4-204ENST00000522796 H3BT86 120 aa6.46□□□□□ -1.38
HMGB4-204ENST00000522796 GP9P14770 177 aa6.46□□□□□ -1.38
HMGB4-204ENST00000522796 CDAP32320 146 aa6.46□□□□□ -1.38
HMGB4-204ENST00000522796 CCL8P80075 99 aa6.46□□□□□ -1.38
HMGB4-204ENST00000522796 DAZ2Q13117 558 aaKnown RBP6.46□□□□□ -1.38
HMGB4-204ENST00000522796 DAZ4Q86SG3 579 aaKnown RBP6.46□□□□□ -1.38
HMGB4-204ENST00000522796 WFDC5Q8TCV5 224 aa6.46□□□□□ -1.38
HMGB4-204ENST00000522796 FMC1Q96HJ9 113 aa6.46□□□□□ -1.38
HMGB4-204ENST00000522796 DAZ1Q9NQZ3 744 aaKnown RBP6.46□□□□□ -1.38
HMGB4-204ENST00000522796 DAZ3Q9NR90 486 aaKnown RBP6.46□□□□□ -1.38
HMGB4-204ENST00000522796 SERP1Q9Y6X1 66 aa6.46□□□□□ -1.38
HMGB4-204ENST00000522796 SMIM26A0A096LP01 95 aa6.45□□□□□ -1.38
HMGB4-204ENST00000522796 C17orf100A8MU93 164 aa6.45□□□□□ -1.38
HMGB4-204ENST00000522796 APOC4P55056 127 aa6.45□□□□□ -1.38
HMGB4-204ENST00000522796 PRR20EP86478 221 aa6.45□□□□□ -1.38
HMGB4-204ENST00000522796 PRR20CP86479 221 aa6.45□□□□□ -1.38
HMGB4-204ENST00000522796 PRR20DP86480 221 aa6.45□□□□□ -1.38
HMGB4-204ENST00000522796 PRR20BP86481 221 aa6.45□□□□□ -1.38
HMGB4-204ENST00000522796 PRR20AP86496 221 aa6.45□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms