RNA–Protein interactions for RNA: ENST00000522052.5

CTNNA1-233, Transcript of catenin alpha 1, humanhuman

TSL 4

Gene CTNNA1, Length 579 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-233ENST00000522052 RELAQ04206 551 aa2.25□□□□□ -2.05
CTNNA1-233ENST00000522052 KRR1Q13601 381 aaKnown RBP2.25□□□□□ -2.05
CTNNA1-233ENST00000522052 GOLT1AQ6ZVE7 132 aa2.25□□□□□ -2.05
CTNNA1-233ENST00000522052 TMED4Q7Z7H5 227 aa2.25□□□□□ -2.05
CTNNA1-233ENST00000522052 TERB2Q8NHR7 220 aa2.25□□□□□ -2.05
CTNNA1-233ENST00000522052 SLC25A40Q8TBP6 338 aa2.25□□□□□ -2.05
CTNNA1-233ENST00000522052 C2orf50Q96LR7 162 aa2.25□□□□□ -2.05
CTNNA1-233ENST00000522052 SCGB3A1Q96QR1 104 aa2.25□□□□□ -2.05
CTNNA1-233ENST00000522052 SMR3AQ99954 134 aa2.25□□□□□ -2.05
CTNNA1-233ENST00000522052 TVP23BQ9NYZ1 205 aa2.25□□□□□ -2.05
CTNNA1-233ENST00000522052 SCN10AQ9Y5Y9 1956 aa2.25□□□□□ -2.05
CTNNA1-233ENST00000522052 DOCK5Q9H7D0 1870 aa2.24□□□□□ -2.05
CTNNA1-233ENST00000522052 ZNF469Q96JG9 3925 aaPredicted RBP2.24□□□□□ -2.05
CTNNA1-233ENST00000522052 OR51F1A6NGY5 319 aa2.24□□□□□ -2.05
CTNNA1-233ENST00000522052 HMSDA8MTL9 139 aa2.24□□□□□ -2.05
CTNNA1-233ENST00000522052 ZNF705FA8MVS1 300 aaPredicted RBP2.24□□□□□ -2.05
CTNNA1-233ENST00000522052 TMEM238C9JI98 176 aa2.24□□□□□ -2.05
CTNNA1-233ENST00000522052 SMIM17P0DL12 118 aa2.24□□□□□ -2.05
CTNNA1-233ENST00000522052 CDC42P60953 191 aa2.24□□□□□ -2.05
CTNNA1-233ENST00000522052 FAM173BQ6P4H8 233 aa2.24□□□□□ -2.05
CTNNA1-233ENST00000522052 Q6Q795 121 aa2.24□□□□□ -2.05
CTNNA1-233ENST00000522052 LRRC28Q86X40 367 aaPredicted RBP2.24□□□□□ -2.05
CTNNA1-233ENST00000522052 BPIFA4PQ86YQ2 179 aa2.24□□□□□ -2.05
CTNNA1-233ENST00000522052 C11orf40Q8WZ69 217 aa2.24□□□□□ -2.05
CTNNA1-233ENST00000522052 GPR146Q96CH1 333 aa2.24□□□□□ -2.05
CTNNA1-233ENST00000522052 PRRT1Q99946 306 aa2.24□□□□□ -2.05
CTNNA1-233ENST00000522052 SLC39A9Q9NUM3 307 aa2.24□□□□□ -2.05
CTNNA1-233ENST00000522052 VPS13CQ709C8 3753 aa2.24□□□□□ -2.05
CTNNA1-233ENST00000522052 SONP18583 2426 aaKnown RBP2.23□□□□□ -2.05
CTNNA1-233ENST00000522052 SIPA1L3O60292 1781 aaPredicted RBP2.23□□□□□ -2.05
CTNNA1-233ENST00000522052 ARHGAP32A7KAX9 2087 aa2.23□□□□□ -2.05
CTNNA1-233ENST00000522052 TRAPPC13A5PLN9 417 aa2.23□□□□□ -2.05
CTNNA1-233ENST00000522052 CIAO1O76071 339 aa2.23□□□□□ -2.05
CTNNA1-233ENST00000522052 S1PR2O95136 353 aa2.23□□□□□ -2.05
CTNNA1-233ENST00000522052 KRTAP6-3Q3LI67 103 aa2.23□□□□□ -2.05
CTNNA1-233ENST00000522052 MIR17HGQ75NE6 70 aa2.23□□□□□ -2.05
CTNNA1-233ENST00000522052 LYG2Q86SG7 212 aa2.23□□□□□ -2.05
CTNNA1-233ENST00000522052 CLVS1Q8IUQ0 354 aaPredicted RBP2.23□□□□□ -2.05
CTNNA1-233ENST00000522052 TMEM86AQ8N2M4 240 aa2.23□□□□□ -2.05
CTNNA1-233ENST00000522052 PFN4Q8NHR9 129 aa2.23□□□□□ -2.05
CTNNA1-233ENST00000522052 DNAJC9Q8WXX5 260 aa2.23□□□□□ -2.05
CTNNA1-233ENST00000522052 ERGIC3Q9Y282 383 aa2.23□□□□□ -2.05
CTNNA1-233ENST00000522052 KIAA1109Q2LD37 5005 aa2.23□□□□□ -2.05
CTNNA1-233ENST00000522052 TENM3Q9P273 2699 aa2.22□□□□□ -2.05
CTNNA1-233ENST00000522052 PGLYRP1O75594 196 aaPredicted RBP2.22□□□□□ -2.05
CTNNA1-233ENST00000522052 NAPSAO96009 420 aa2.22□□□□□ -2.05
CTNNA1-233ENST00000522052 TRGC1P0CF51 173 aa2.22□□□□□ -2.05
CTNNA1-233ENST00000522052 GNG10P50151 68 aa2.22□□□□□ -2.05
CTNNA1-233ENST00000522052 DEFA3P59666 94 aa2.22□□□□□ -2.05
CTNNA1-233ENST00000522052 VBP1P61758 197 aa2.22□□□□□ -2.05
CTNNA1-233ENST00000522052 POU6F1Q14863 301 aa2.22□□□□□ -2.05
CTNNA1-233ENST00000522052 KRTAP5-5Q701N2 237 aaPredicted RBP2.22□□□□□ -2.05
CTNNA1-233ENST00000522052 DCANP1Q8TF63 244 aa2.22□□□□□ -2.05
CTNNA1-233ENST00000522052 TMEM106AQ96A25 262 aa2.22□□□□□ -2.05
CTNNA1-233ENST00000522052 RNF122Q9H9V4 155 aa2.22□□□□□ -2.05
CTNNA1-233ENST00000522052 TMEM106BQ9NUM4 274 aa2.22□□□□□ -2.05
CTNNA1-233ENST00000522052 ROCK2O75116 1388 aaKnown RBP2.22□□□□□ -2.05
CTNNA1-233ENST00000522052 ZANQ9Y493 2812 aa2.22□□□□□ -2.05
CTNNA1-233ENST00000522052 TRAV4A0A0B4J268 109 aa2.21□□□□□ -2.06
CTNNA1-233ENST00000522052 MEIS3P1A6NDR6 274 aa2.21□□□□□ -2.06
CTNNA1-233ENST00000522052 J3QRK9 145 aa2.21□□□□□ -2.06
CTNNA1-233ENST00000522052 HMGB3O15347 200 aaKnown RBP2.21□□□□□ -2.06
CTNNA1-233ENST00000522052 C1QBP02746 253 aa2.21□□□□□ -2.06
CTNNA1-233ENST00000522052 S100A4P26447 101 aaKnown RBP2.21□□□□□ -2.06
CTNNA1-233ENST00000522052 G0S2P27469 103 aa2.21□□□□□ -2.06
CTNNA1-233ENST00000522052 CASP1P29466 404 aa2.21□□□□□ -2.06
CTNNA1-233ENST00000522052 AQP4P55087 323 aa2.21□□□□□ -2.06
CTNNA1-233ENST00000522052 SLC38A11Q08AI6 406 aa2.21□□□□□ -2.06
CTNNA1-233ENST00000522052 NDUFA5Q16718 116 aa2.21□□□□□ -2.06
CTNNA1-233ENST00000522052 LCA10Q71F78 164 aa2.21□□□□□ -2.06
CTNNA1-233ENST00000522052 RNASE11Q8TAA1 199 aaKnown RBP2.21□□□□□ -2.06
CTNNA1-233ENST00000522052 SPACA4Q8TDM5 124 aa2.21□□□□□ -2.06
CTNNA1-233ENST00000522052 PLXNA4Q9HCM2 1894 aa2.21□□□□□ -2.06
CTNNA1-233ENST00000522052 PYCARDQ9ULZ3 195 aa2.21□□□□□ -2.06
CTNNA1-233ENST00000522052 ANK2Q01484 3957 aa2.2□□□□□ -2.06
CTNNA1-233ENST00000522052 C19orf84I3L1E1 186 aa2.2□□□□□ -2.06
CTNNA1-233ENST00000522052 ATG12O94817 140 aa2.2□□□□□ -2.06
CTNNA1-233ENST00000522052 METTL15P1P0C7V9 234 aa2.2□□□□□ -2.06
CTNNA1-233ENST00000522052 LINC01554Q52M75 96 aa2.2□□□□□ -2.06
CTNNA1-233ENST00000522052 TRAPPC6BQ86SZ2 158 aa2.2□□□□□ -2.06
CTNNA1-233ENST00000522052 STX12Q86Y82 276 aa2.2□□□□□ -2.06
CTNNA1-233ENST00000522052 HIST3H2BBQ8N257 126 aa2.2□□□□□ -2.06
CTNNA1-233ENST00000522052 OR52R1Q8NGF1 315 aa2.2□□□□□ -2.06
CTNNA1-233ENST00000522052 HSPB9Q9BQS6 159 aa2.2□□□□□ -2.06
CTNNA1-233ENST00000522052 GINS4Q9BRT9 223 aa2.2□□□□□ -2.06
CTNNA1-233ENST00000522052 GID8Q9NWU2 228 aa2.2□□□□□ -2.06
CTNNA1-233ENST00000522052 BAIAP2Q9UQB8 552 aa2.2□□□□□ -2.06
CTNNA1-233ENST00000522052 UTP11Q9Y3A2 253 aaKnown RBP2.2□□□□□ -2.06
CTNNA1-233ENST00000522052 SVEP1Q4LDE5 3571 aa2.19□□□□□ -2.06
CTNNA1-233ENST00000522052 TRBV19A0A075B6N1 114 aa2.19□□□□□ -2.06
CTNNA1-233ENST00000522052 ZNF860A6NHJ4 632 aa2.19□□□□□ -2.06
CTNNA1-233ENST00000522052 CLDN25C9JDP6 229 aa2.19□□□□□ -2.06
CTNNA1-233ENST00000522052 IFNA1P01562 189 aa2.19□□□□□ -2.06
CTNNA1-233ENST00000522052 C1QCP02747 245 aa2.19□□□□□ -2.06
CTNNA1-233ENST00000522052 CLPSP04118 112 aa2.19□□□□□ -2.06
CTNNA1-233ENST00000522052 IGKV1-16P04430 117 aa2.19□□□□□ -2.06
CTNNA1-233ENST00000522052 ATP5G3P48201 142 aa2.19□□□□□ -2.06
CTNNA1-233ENST00000522052 YPEL3P61236 119 aaPredicted RBP2.19□□□□□ -2.06
CTNNA1-233ENST00000522052 ARHGAP11BQ3KRB8 267 aa2.19□□□□□ -2.06
CTNNA1-233ENST00000522052 C8orf4Q9NR00 106 aa2.19□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms