RNA–Protein interactions for RNA: ENST00000520790.1

PCDHGB6-201, Transcript of protocadherin gamma subfamily B, 6, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGB6, Length 4,599 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB6-201ENST00000520790 A8MWL6 223 aa9.31□□□□□ -0.92
PCDHGB6-201ENST00000520790 IGKV2D-40P01614 121 aaPredicted RBP9.31□□□□□ -0.92
PCDHGB6-201ENST00000520790 CBLN1P23435 193 aa9.31□□□□□ -0.92
PCDHGB6-201ENST00000520790 GCSAMLQ5JQS6 135 aa9.31□□□□□ -0.92
PCDHGB6-201ENST00000520790 LY6G6FQ5SQ64 297 aa9.31□□□□□ -0.92
PCDHGB6-201ENST00000520790 EXOC3-AS1Q8N2X6 119 aa9.31□□□□□ -0.92
PCDHGB6-201ENST00000520790 SRSF8Q9BRL6 282 aaKnown RBP9.31□□□□□ -0.92
PCDHGB6-201ENST00000520790 MRPL18Q9H0U6 180 aaKnown RBP9.31□□□□□ -0.92
PCDHGB6-201ENST00000520790 DDTP30046 118 aa9.3□□□□□ -0.92
PCDHGB6-201ENST00000520790 SRIP30626 198 aa9.3□□□□□ -0.92
PCDHGB6-201ENST00000520790 GNG5P63218 68 aa9.3□□□□□ -0.92
PCDHGB6-201ENST00000520790 LINC01548A6NM66 108 aa9.3□□□□□ -0.92
PCDHGB6-201ENST00000520790 FAM90A9PA6NNJ1 464 aa9.3□□□□□ -0.92
PCDHGB6-201ENST00000520790 CDX1P47902 265 aaPredicted RBP9.3□□□□□ -0.92
PCDHGB6-201ENST00000520790 FOXA3P55318 350 aaPredicted RBP9.3□□□□□ -0.92
PCDHGB6-201ENST00000520790 RNF126Q9BV68 326 aa9.3□□□□□ -0.92
PCDHGB6-201ENST00000520790 TRAV21A0A0B4J279 112 aa9.3□□□□□ -0.92
PCDHGB6-201ENST00000520790 SRSF9Q13242 221 aaKnown RBP eCLIP9.3□□□□□ -0.92
PCDHGB6-201ENST00000520790 C10orf99Q6UWK7 81 aa9.3□□□□□ -0.92
PCDHGB6-201ENST00000520790 DLX4Q92988 240 aaPredicted RBP9.3□□□□□ -0.92
PCDHGB6-201ENST00000520790 PGLYRP4Q96LB8 373 aa9.3□□□□□ -0.92
PCDHGB6-201ENST00000520790 PTPRBP23467 1997 aa9.29□□□□□ -0.92
PCDHGB6-201ENST00000520790 COL6A5A8TX70 2615 aa9.29□□□□□ -0.92
PCDHGB6-201ENST00000520790 GAGE12BA1L429 117 aa9.29□□□□□ -0.92
PCDHGB6-201ENST00000520790 M0R3E3 92 aa9.29□□□□□ -0.92
PCDHGB6-201ENST00000520790 SLC17A3O00476 420 aa9.29□□□□□ -0.92
PCDHGB6-201ENST00000520790 GAGE7O76087 117 aa9.29□□□□□ -0.92
PCDHGB6-201ENST00000520790 GAGE12FP0CL80 117 aa9.29□□□□□ -0.92
PCDHGB6-201ENST00000520790 GAGE12GP0CL81 117 aa9.29□□□□□ -0.92
PCDHGB6-201ENST00000520790 GAGE12IP0CL82 117 aa9.29□□□□□ -0.92
PCDHGB6-201ENST00000520790 SMAGPQ0VAQ4 97 aa9.29□□□□□ -0.92
PCDHGB6-201ENST00000520790 CD300EQ496F6 205 aaPredicted RBP9.29□□□□□ -0.92
PCDHGB6-201ENST00000520790 Q6ZRM9 215 aa9.29□□□□□ -0.92
PCDHGB6-201ENST00000520790 SRSF1Q07955 248 aaKnown RBP eCLIP9.29□□□□□ -0.92
PCDHGB6-201ENST00000520790 TMEM97Q5BJF2 176 aa9.29□□□□□ -0.92
PCDHGB6-201ENST00000520790 NDUFA4L2Q9NRX3 87 aa9.29□□□□□ -0.92
PCDHGB6-201ENST00000520790 A0A0G2JRQ6 117 aa9.29□□□□□ -0.92
PCDHGB6-201ENST00000520790 NPIPB5A8MRT5 1133 aa9.29□□□□□ -0.92
PCDHGB6-201ENST00000520790 PAX9P55771 341 aa9.29□□□□□ -0.92
PCDHGB6-201ENST00000520790 IMMP2LQ96T52 175 aa9.29□□□□□ -0.92
PCDHGB6-201ENST00000520790 TRAV12-2A0A075B6T6 113 aa9.28□□□□□ -0.92
PCDHGB6-201ENST00000520790 H3BUA1 57 aa9.28□□□□□ -0.92
PCDHGB6-201ENST00000520790 RPL13AP40429 203 aaKnown RBP9.28□□□□□ -0.92
PCDHGB6-201ENST00000520790 ID3Q02535 119 aa9.28□□□□□ -0.92
PCDHGB6-201ENST00000520790 RNF182Q8N6D2 247 aa9.28□□□□□ -0.92
PCDHGB6-201ENST00000520790 Q8TAT8 98 aa9.28□□□□□ -0.92
PCDHGB6-201ENST00000520790 TRGV11A0A075B6L2 103 aa9.28□□□□□ -0.92
PCDHGB6-201ENST00000520790 IGHV7-4-1A0A0J9YVY3 117 aa9.28□□□□□ -0.92
PCDHGB6-201ENST00000520790 INSL3P51460 131 aa9.28□□□□□ -0.92
PCDHGB6-201ENST00000520790 KRTAP27-1Q3LI81 207 aa9.28□□□□□ -0.92
PCDHGB6-201ENST00000520790 TRGV9Q99603 122 aa9.28□□□□□ -0.92
PCDHGB6-201ENST00000520790 PRADC1Q9BSG0 188 aa9.28□□□□□ -0.92
PCDHGB6-201ENST00000520790 SMPXQ9UHP9 88 aa9.28□□□□□ -0.92
PCDHGB6-201ENST00000520790 IGSF10Q6WRI0 2623 aa9.28□□□□□ -0.92
PCDHGB6-201ENST00000520790 H7C1H1 209 aa9.27□□□□□ -0.92
PCDHGB6-201ENST00000520790 Q6ZS49 121 aa9.27□□□□□ -0.92
PCDHGB6-201ENST00000520790 A0A1B0GV90 55 aa9.27□□□□□ -0.93
PCDHGB6-201ENST00000520790 FABP5P3A8MUU1 101 aa9.27□□□□□ -0.93
PCDHGB6-201ENST00000520790 PSMB2P49721 201 aa9.27□□□□□ -0.93
PCDHGB6-201ENST00000520790 PRR31Q5SQ13 230 aa9.27□□□□□ -0.93
PCDHGB6-201ENST00000520790 ARL6IP6Q8N6S5 226 aa9.27□□□□□ -0.93
PCDHGB6-201ENST00000520790 LY6G5BQ8NDX9 201 aa9.27□□□□□ -0.93
PCDHGB6-201ENST00000520790 SPAG8Q99932 426 aaPredicted RBP9.27□□□□□ -0.93
PCDHGB6-201ENST00000520790 MEGF9Q9H1U4 602 aa9.27□□□□□ -0.93
PCDHGB6-201ENST00000520790 ESM1Q9NQ30 184 aa9.27□□□□□ -0.93
PCDHGB6-201ENST00000520790 BTF3P20290 206 aaKnown RBP9.27□□□□□ -0.93
PCDHGB6-201ENST00000520790 SPATA45Q537H7 98 aa9.27□□□□□ -0.93
PCDHGB6-201ENST00000520790 LHFPL1Q86WI0 220 aa9.27□□□□□ -0.93
PCDHGB6-201ENST00000520790 ZNF502Q8TBZ5 544 aa9.27□□□□□ -0.93
PCDHGB6-201ENST00000520790 RAB37Q96AX2 223 aa9.27□□□□□ -0.93
PCDHGB6-201ENST00000520790 MAP1AP78559 2803 aaPredicted RBP9.27□□□□□ -0.93
PCDHGB6-201ENST00000520790 TOMM40O96008 361 aa9.27□□□□□ -0.93
PCDHGB6-201ENST00000520790 COL5A1-AS1Q5SY13 56 aa9.27□□□□□ -0.93
PCDHGB6-201ENST00000520790 TCF23Q7RTU1 214 aa9.27□□□□□ -0.93
PCDHGB6-201ENST00000520790 WIPF2Q8TF74 440 aaPredicted RBP9.27□□□□□ -0.93
PCDHGB6-201ENST00000520790 A0A096LPF7 62 aa9.26□□□□□ -0.93
PCDHGB6-201ENST00000520790 LOC105371267A0A1B0GV96 52 aa9.26□□□□□ -0.93
PCDHGB6-201ENST00000520790 C5orf52A6NGY3 159 aa9.26□□□□□ -0.93
PCDHGB6-201ENST00000520790 LEPROTL1O95214 131 aa9.26□□□□□ -0.93
PCDHGB6-201ENST00000520790 CKS2P33552 79 aa9.26□□□□□ -0.93
PCDHGB6-201ENST00000520790 RPP25LQ8N5L8 163 aaKnown RBP9.26□□□□□ -0.93
PCDHGB6-201ENST00000520790 SRP19P09132 144 aaKnown RBP9.26□□□□□ -0.93
PCDHGB6-201ENST00000520790 COL4A2P08572 1712 aa9.26□□□□□ -0.93
PCDHGB6-201ENST00000520790 NBEAL1Q6ZS30 2694 aa9.26□□□□□ -0.93
PCDHGB6-201ENST00000520790 ZFAND6Q6FIF0 208 aa9.26□□□□□ -0.93
PCDHGB6-201ENST00000520790 DEFB125Q8N687 156 aa9.26□□□□□ -0.93
PCDHGB6-201ENST00000520790 HSPB8Q9UJY1 196 aa9.26□□□□□ -0.93
PCDHGB6-201ENST00000520790 WDR83OSQ9Y284 106 aa9.26□□□□□ -0.93
PCDHGB6-201ENST00000520790 CIDEAO60543 219 aa9.26□□□□□ -0.93
PCDHGB6-201ENST00000520790 CCL20P78556 96 aa9.26□□□□□ -0.93
PCDHGB6-201ENST00000520790 PSG3Q16557 428 aa9.26□□□□□ -0.93
PCDHGB6-201ENST00000520790 C8orf31Q8N9H6 132 aa9.26□□□□□ -0.93
PCDHGB6-201ENST00000520790 OR11H2Q8NH07 326 aa9.26□□□□□ -0.93
PCDHGB6-201ENST00000520790 AGMATQ9BSE5 352 aa9.26□□□□□ -0.93
PCDHGB6-201ENST00000520790 AP5S1Q9NUS5 200 aa9.26□□□□□ -0.93
PCDHGB6-201ENST00000520790 KLK9Q9UKQ9 250 aa9.26□□□□□ -0.93
PCDHGB6-201ENST00000520790 MUC3AQ02505 3323 aa9.25□□□□□ -0.93
PCDHGB6-201ENST00000520790 ATP5G3P48201 142 aa9.25□□□□□ -0.93
PCDHGB6-201ENST00000520790 TTC9CQ8N5M4 171 aa9.25□□□□□ -0.93
PCDHGB6-201ENST00000520790 FAM110AQ9BQ89 295 aa9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms