RNA–Protein interactions for RNA: ENST00000520166.5

TSNARE1-205, Transcript of t-SNARE domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TSNARE1, Length 1,742 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSNARE1-205ENST00000520166 OTORQ9NRC9 128 aa12.74□□□□□ -0.37
TSNARE1-205ENST00000520166 SIGLEC8Q9NYZ4 499 aa12.74□□□□□ -0.37
TSNARE1-205ENST00000520166 RNF24Q9Y225 148 aa12.74□□□□□ -0.37
TSNARE1-205ENST00000520166 TRAV34A0A0B4J273 112 aa12.73□□□□□ -0.37
TSNARE1-205ENST00000520166 K7EQG2 157 aa12.73□□□□□ -0.37
TSNARE1-205ENST00000520166 DNASE2O00115 360 aaPredicted RBP12.73□□□□□ -0.37
TSNARE1-205ENST00000520166 IGLV1-51P01701 117 aa12.73□□□□□ -0.37
TSNARE1-205ENST00000520166 PDE6HQ13956 83 aa12.73□□□□□ -0.37
TSNARE1-205ENST00000520166 EPDR1Q9UM22 224 aa12.73□□□□□ -0.37
TSNARE1-205ENST00000520166 F6UB75 175 aa12.72□□□□□ -0.37
TSNARE1-205ENST00000520166 ZNF688P0C7X2 276 aa12.72□□□□□ -0.37
TSNARE1-205ENST00000520166 CD33P20138 364 aa12.72□□□□□ -0.37
TSNARE1-205ENST00000520166 BMI1P35226 326 aa12.72□□□□□ -0.37
TSNARE1-205ENST00000520166 ZNF124Q15973 351 aa12.72□□□□□ -0.37
TSNARE1-205ENST00000520166 WFDC9Q8NEX5 89 aa12.72□□□□□ -0.37
TSNARE1-205ENST00000520166 IGKV2-40A0A087WW87 121 aaPredicted RBP12.71□□□□□ -0.37
TSNARE1-205ENST00000520166 TRAV8-1A0A0A6YYK1 113 aa12.71□□□□□ -0.37
TSNARE1-205ENST00000520166 TSPAN4O14817 238 aa12.71□□□□□ -0.37
TSNARE1-205ENST00000520166 IGKV2D-40P01614 121 aaPredicted RBP12.71□□□□□ -0.37
TSNARE1-205ENST00000520166 ADCYAP1P18509 176 aa12.71□□□□□ -0.37
TSNARE1-205ENST00000520166 PSG9Q00887 426 aa12.71□□□□□ -0.37
TSNARE1-205ENST00000520166 GUCA2BQ16661 112 aa12.71□□□□□ -0.37
TSNARE1-205ENST00000520166 LCN12Q6JVE5 192 aa12.71□□□□□ -0.37
TSNARE1-205ENST00000520166 SEC11CQ9BY50 192 aa12.71□□□□□ -0.37
TSNARE1-205ENST00000520166 ZNF256Q9Y2P7 627 aaPredicted RBP12.71□□□□□ -0.37
TSNARE1-205ENST00000520166 ZNF253O75346 499 aa12.71□□□□□ -0.38
TSNARE1-205ENST00000520166 APOC3P02656 99 aa12.71□□□□□ -0.38
TSNARE1-205ENST00000520166 RPUSD4Q96CM3 377 aaKnown RBP12.71□□□□□ -0.38
TSNARE1-205ENST00000520166 ERCC8Q13216 396 aa12.7□□□□□ -0.38
TSNARE1-205ENST00000520166 PSG3Q16557 428 aa12.7□□□□□ -0.38
TSNARE1-205ENST00000520166 GDF5OSQ5U4N7 250 aa12.7□□□□□ -0.38
TSNARE1-205ENST00000520166 GOLT1AQ6ZVE7 132 aa12.7□□□□□ -0.38
TSNARE1-205ENST00000520166 LYPD1Q8N2G4 141 aa12.7□□□□□ -0.38
TSNARE1-205ENST00000520166 SLC50A1Q9BRV3 221 aa12.7□□□□□ -0.38
TSNARE1-205ENST00000520166 AAMDCQ9H7C9 122 aa12.7□□□□□ -0.38
TSNARE1-205ENST00000520166 ARL2-SNX15V9GYD0 113 aa12.7□□□□□ -0.38
TSNARE1-205ENST00000520166 DIRC3C9JPN6 131 aa12.69□□□□□ -0.38
TSNARE1-205ENST00000520166 PEX7O00628 323 aa12.69□□□□□ -0.38
TSNARE1-205ENST00000520166 TCRAP04437 139 aa12.69□□□□□ -0.38
TSNARE1-205ENST00000520166 ZNF674Q2M3X9 581 aa12.69□□□□□ -0.38
TSNARE1-205ENST00000520166 PSMG4Q5JS54 123 aa12.69□□□□□ -0.38
TSNARE1-205ENST00000520166 SOHLH1Q5JUK2 328 aa12.69□□□□□ -0.38
TSNARE1-205ENST00000520166 C2CD4CQ8TF44 421 aa12.69□□□□□ -0.38
TSNARE1-205ENST00000520166 VGLL1Q99990 258 aa12.69□□□□□ -0.38
TSNARE1-205ENST00000520166 PGPEP1LA6NFU8 196 aa12.68□□□□□ -0.38
TSNARE1-205ENST00000520166 ISLRO14498 428 aa12.68□□□□□ -0.38
TSNARE1-205ENST00000520166 BTF3P20290 206 aaKnown RBP12.68□□□□□ -0.38
TSNARE1-205ENST00000520166 OXLD1Q5BKU9 147 aa12.68□□□□□ -0.38
TSNARE1-205ENST00000520166 C10orf91Q5T1B1 145 aa12.68□□□□□ -0.38
TSNARE1-205ENST00000520166 C5orf17Q8NAS9 161 aa12.68□□□□□ -0.38
TSNARE1-205ENST00000520166 TXNDC17Q9BRA2 123 aa12.68□□□□□ -0.38
TSNARE1-205ENST00000520166 PDE6DO43924 150 aa12.68□□□□□ -0.38
TSNARE1-205ENST00000520166 IGLV2-11P01706 119 aa12.68□□□□□ -0.38
TSNARE1-205ENST00000520166 ZNF738Q8NE65 137 aa12.68□□□□□ -0.38
TSNARE1-205ENST00000520166 CMTM2Q8TAZ6 248 aa12.68□□□□□ -0.38
TSNARE1-205ENST00000520166 PARLQ9H300 379 aa12.68□□□□□ -0.38
TSNARE1-205ENST00000520166 AURKAIP1Q9NWT8 199 aaPredicted RBP12.68□□□□□ -0.38
TSNARE1-205ENST00000520166 TRBV20OR9-2A0A075B6H5 130 aa12.67□□□□□ -0.38
TSNARE1-205ENST00000520166 CD7P09564 240 aa12.67□□□□□ -0.38
TSNARE1-205ENST00000520166 MEOX2P50222 304 aa12.67□□□□□ -0.38
TSNARE1-205ENST00000520166 PAFAH1B2P68402 229 aa12.67□□□□□ -0.38
TSNARE1-205ENST00000520166 APRG1Q8IVJ8 170 aa12.67□□□□□ -0.38
TSNARE1-205ENST00000520166 C11orf52Q96A22 123 aa12.67□□□□□ -0.38
TSNARE1-205ENST00000520166 NKX6-2Q9C056 277 aaPredicted RBP12.67□□□□□ -0.38
TSNARE1-205ENST00000520166 CARHSP1Q9Y2V2 147 aaKnown RBP12.67□□□□□ -0.38
TSNARE1-205ENST00000520166 AGRNO00468 2067 aa12.67□□□□□ -0.38
TSNARE1-205ENST00000520166 DNHD1Q96M86 4753 aa12.66□□□□□ -0.38
TSNARE1-205ENST00000520166 F6UZH7 168 aa12.66□□□□□ -0.38
TSNARE1-205ENST00000520166 TMEM250H0YL14 139 aa12.66□□□□□ -0.38
TSNARE1-205ENST00000520166 RPL35P42766 123 aaKnown RBP12.66□□□□□ -0.38
TSNARE1-205ENST00000520166 DEFB131AP59861 70 aa12.66□□□□□ -0.38
TSNARE1-205ENST00000520166 WFDC10AQ9H1F0 79 aa12.66□□□□□ -0.38
TSNARE1-205ENST00000520166 NDUFS6O75380 124 aaKnown RBP12.65□□□□□ -0.38
TSNARE1-205ENST00000520166 RIPPLY3P57055 190 aa12.65□□□□□ -0.38
TSNARE1-205ENST00000520166 ODF3L2Q3SX64 289 aa12.65□□□□□ -0.38
TSNARE1-205ENST00000520166 C9orf66Q5T8R8 295 aa12.65□□□□□ -0.38
TSNARE1-205ENST00000520166 NHLRC2Q8NBF2 726 aa12.65□□□□□ -0.38
TSNARE1-205ENST00000520166 Q8TAT8 98 aa12.65□□□□□ -0.38
TSNARE1-205ENST00000520166 SPAG8Q99932 426 aaPredicted RBP12.65□□□□□ -0.38
TSNARE1-205ENST00000520166 ATG101Q9BSB4 218 aa12.65□□□□□ -0.38
TSNARE1-205ENST00000520166 TRAV25A0A0B4J276 109 aa12.65□□□□□ -0.38
TSNARE1-205ENST00000520166 KNCNA6PVL3 124 aa12.65□□□□□ -0.38
TSNARE1-205ENST00000520166 TVP23CQ96ET8 276 aa12.65□□□□□ -0.38
TSNARE1-205ENST00000520166 AGPAT4-IT1Q9H0P7 198 aa12.65□□□□□ -0.38
TSNARE1-205ENST00000520166 MAP6D1Q9H9H5 199 aa12.65□□□□□ -0.38
TSNARE1-205ENST00000520166 ID1P41134 155 aa12.64□□□□□ -0.39
TSNARE1-205ENST00000520166 CSN1S1P47710 185 aa12.64□□□□□ -0.39
TSNARE1-205ENST00000520166 SVBPQ8N300 66 aa12.64□□□□□ -0.39
TSNARE1-205ENST00000520166 HIST1H2BAQ96A08 127 aa12.64□□□□□ -0.39
TSNARE1-205ENST00000520166 GPR61Q9BZJ8 451 aa12.64□□□□□ -0.39
TSNARE1-205ENST00000520166 AKR1C3P42330 323 aa12.63□□□□□ -0.39
TSNARE1-205ENST00000520166 BEAN1Q3B7T3 259 aa12.63□□□□□ -0.39
TSNARE1-205ENST00000520166 PRNTQ86SH4 94 aa12.63□□□□□ -0.39
TSNARE1-205ENST00000520166 OR4C46A6NHA9 309 aa12.62□□□□□ -0.39
TSNARE1-205ENST00000520166 ZNF727A8MUV8 499 aa12.62□□□□□ -0.39
TSNARE1-205ENST00000520166 IGKV3-20P01619 116 aa12.62□□□□□ -0.39
TSNARE1-205ENST00000520166 SSTP61278 116 aa12.62□□□□□ -0.39
TSNARE1-205ENST00000520166 SNRPD3P62318 126 aaKnown RBP12.62□□□□□ -0.39
TSNARE1-205ENST00000520166 SMIM7Q9BQ49 75 aa12.62□□□□□ -0.39
TSNARE1-205ENST00000520166 KLF12Q9Y4X4 402 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms