RNA–Protein interactions for RNA: ENST00000519489.1

CTNNA1-216, Transcript of catenin alpha 1, humanhuman

TSL 2

Gene CTNNA1, Length 358 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-216ENST00000519489 AK6Q9Y3D8 172 aaKnown RBP3.92□□□□□ -1.78
CTNNA1-216ENST00000519489 IGKV2-24A0A0C4DH68 120 aa3.91□□□□□ -1.78
CTNNA1-216ENST00000519489 PFN1P07737 140 aaKnown RBP3.91□□□□□ -1.78
CTNNA1-216ENST00000519489 SLC25A4P12235 298 aa3.91□□□□□ -1.78
CTNNA1-216ENST00000519489 SUB1P53999 127 aaKnown RBP eCLIP3.91□□□□□ -1.78
CTNNA1-216ENST00000519489 TMEM183BQ1AE95 376 aa3.91□□□□□ -1.78
CTNNA1-216ENST00000519489 CDNFQ49AH0 187 aa3.91□□□□□ -1.78
CTNNA1-216ENST00000519489 FAM162BQ5T6X4 162 aa3.91□□□□□ -1.78
CTNNA1-216ENST00000519489 PRR9Q5T870 116 aa3.91□□□□□ -1.78
CTNNA1-216ENST00000519489 TMEM182Q6ZP80 229 aaPredicted RBP3.91□□□□□ -1.78
CTNNA1-216ENST00000519489 H2BFWTQ7Z2G1 175 aa3.91□□□□□ -1.78
CTNNA1-216ENST00000519489 TMEM183AQ8IXX5 376 aa3.91□□□□□ -1.78
CTNNA1-216ENST00000519489 OR5H2Q8NGV7 314 aa3.91□□□□□ -1.78
CTNNA1-216ENST00000519489 RHOXF1Q8NHV9 184 aa3.91□□□□□ -1.78
CTNNA1-216ENST00000519489 RASL10AQ92737 203 aa3.91□□□□□ -1.78
CTNNA1-216ENST00000519489 C2orf50Q96LR7 162 aa3.91□□□□□ -1.78
CTNNA1-216ENST00000519489 MYCBPQ99417 103 aaPredicted RBP3.91□□□□□ -1.78
CTNNA1-216ENST00000519489 CENPOQ9BU64 300 aa3.91□□□□□ -1.78
CTNNA1-216ENST00000519489 TMEM222Q9H0R3 208 aa3.91□□□□□ -1.78
CTNNA1-216ENST00000519489 PLGRKTQ9HBL7 147 aa3.91□□□□□ -1.78
CTNNA1-216ENST00000519489 IGLV7-46A0A075B6I9 117 aa3.9□□□□□ -1.79
CTNNA1-216ENST00000519489 A0A0G2JRQ6 117 aa3.9□□□□□ -1.79
CTNNA1-216ENST00000519489 TCRBV3S1A0A5B6 114 aa3.9□□□□□ -1.79
CTNNA1-216ENST00000519489 AQP12BA6NM10 295 aa3.9□□□□□ -1.79
CTNNA1-216ENST00000519489 HLA-DQA1P01909 254 aa3.9□□□□□ -1.79
CTNNA1-216ENST00000519489 TCRBP04435 133 aa3.9□□□□□ -1.79
CTNNA1-216ENST00000519489 SNRPCP09234 159 aaKnown RBP3.9□□□□□ -1.79
CTNNA1-216ENST00000519489 LINC00694P0DN24 101 aa3.9□□□□□ -1.79
CTNNA1-216ENST00000519489 HTR2BP41595 481 aa3.9□□□□□ -1.79
CTNNA1-216ENST00000519489 C4orf46Q504U0 113 aa3.9□□□□□ -1.79
CTNNA1-216ENST00000519489 SUMO4Q6EEV6 95 aa3.9□□□□□ -1.79
CTNNA1-216ENST00000519489 TMPRSS11AQ6ZMR5 421 aa3.9□□□□□ -1.79
CTNNA1-216ENST00000519489 AQP12AQ8IXF9 295 aa3.9□□□□□ -1.79
CTNNA1-216ENST00000519489 MARCH1Q8TCQ1 289 aa3.9□□□□□ -1.79
CTNNA1-216ENST00000519489 TRIM63Q969Q1 353 aa3.9□□□□□ -1.79
CTNNA1-216ENST00000519489 GFRA4Q9GZZ7 299 aa3.9□□□□□ -1.79
CTNNA1-216ENST00000519489 DAPK2Q9UIK4 370 aa3.9□□□□□ -1.79
CTNNA1-216ENST00000519489 RAB22AQ9UL26 194 aa3.9□□□□□ -1.79
CTNNA1-216ENST00000519489 TRAV4A0A0B4J268 109 aa3.89□□□□□ -1.79
CTNNA1-216ENST00000519489 C7orf71A4D174 169 aa3.89□□□□□ -1.79
CTNNA1-216ENST00000519489 KLLNB2CW77 178 aa3.89□□□□□ -1.79
CTNNA1-216ENST00000519489 WBP4O75554 376 aaKnown RBP3.89□□□□□ -1.79
CTNNA1-216ENST00000519489 CCR6P51684 374 aa3.89□□□□□ -1.79
CTNNA1-216ENST00000519489 C2orf83Q53S99 150 aa3.89□□□□□ -1.79
CTNNA1-216ENST00000519489 A0A096LNI7 61 aa3.88□□□□□ -1.79
CTNNA1-216ENST00000519489 MRPS12O15235 138 aaKnown RBP3.88□□□□□ -1.79
CTNNA1-216ENST00000519489 CD1AP06126 327 aa3.88□□□□□ -1.79
CTNNA1-216ENST00000519489 HOXB5P09067 269 aa3.88□□□□□ -1.79
CTNNA1-216ENST00000519489 UCHL1P09936 223 aa3.88□□□□□ -1.79
CTNNA1-216ENST00000519489 OR10J4P0C629 311 aa3.88□□□□□ -1.79
CTNNA1-216ENST00000519489 RFX2P48378 723 aa3.88□□□□□ -1.79
CTNNA1-216ENST00000519489 ZNF138P52744 262 aa3.88□□□□□ -1.79
CTNNA1-216ENST00000519489 TBC1D26Q86UD7 250 aa3.88□□□□□ -1.79
CTNNA1-216ENST00000519489 TSPAN14Q8NG11 270 aa3.88□□□□□ -1.79
CTNNA1-216ENST00000519489 OR4D5Q8NGN0 318 aa3.88□□□□□ -1.79
CTNNA1-216ENST00000519489 RNASEH2CQ8TDP1 164 aaKnown RBP3.88□□□□□ -1.79
CTNNA1-216ENST00000519489 SLC25A38Q96DW6 304 aa3.88□□□□□ -1.79
CTNNA1-216ENST00000519489 FAM19A4Q96LR4 140 aa3.88□□□□□ -1.79
CTNNA1-216ENST00000519489 C1orf43Q9BWL3 253 aa3.88□□□□□ -1.79
CTNNA1-216ENST00000519489 TMEM56-RWDD3S4R434 201 aa3.88□□□□□ -1.79
CTNNA1-216ENST00000519489 H0Y9J4 135 aa3.87□□□□□ -1.79
CTNNA1-216ENST00000519489 M0R2T5 61 aa3.87□□□□□ -1.79
CTNNA1-216ENST00000519489 SLC17A3O00476 420 aa3.87□□□□□ -1.79
CTNNA1-216ENST00000519489 SLC25A5P05141 298 aaKnown RBP3.87□□□□□ -1.79
CTNNA1-216ENST00000519489 GADD45AP24522 165 aa3.87□□□□□ -1.79
CTNNA1-216ENST00000519489 MAPK3P27361 379 aaPredicted RBP3.87□□□□□ -1.79
CTNNA1-216ENST00000519489 RNASE4P34096 147 aaKnown RBP3.87□□□□□ -1.79
CTNNA1-216ENST00000519489 LEPP41159 167 aa3.87□□□□□ -1.79
CTNNA1-216ENST00000519489 POLR2GP62487 172 aaKnown RBP eCLIP3.87□□□□□ -1.79
CTNNA1-216ENST00000519489 RPS25P62851 125 aaKnown RBP3.87□□□□□ -1.79
CTNNA1-216ENST00000519489 ERCC8Q13216 396 aa3.87□□□□□ -1.79
CTNNA1-216ENST00000519489 SPATA24Q86W54 205 aa3.87□□□□□ -1.79
CTNNA1-216ENST00000519489 DHRSXQ8N5I4 330 aa3.87□□□□□ -1.79
CTNNA1-216ENST00000519489 OR4C5Q8NGB2 326 aa3.87□□□□□ -1.79
CTNNA1-216ENST00000519489 FXYD6Q9H0Q3 95 aa3.87□□□□□ -1.79
CTNNA1-216ENST00000519489 DIMT1Q9UNQ2 313 aaKnown RBP3.87□□□□□ -1.79
CTNNA1-216ENST00000519489 A0A087X0K7 114 aa3.86□□□□□ -1.79
CTNNA1-216ENST00000519489 ZFP92A6NM28 416 aa3.86□□□□□ -1.79
CTNNA1-216ENST00000519489 SNTNA6NMZ2 147 aa3.86□□□□□ -1.79
CTNNA1-216ENST00000519489 SNRPGP15A8MWD9 76 aa3.86□□□□□ -1.79
CTNNA1-216ENST00000519489 HMGB1P1B2RPK0 211 aaPredicted RBP3.86□□□□□ -1.79
CTNNA1-216ENST00000519489 H3BTX0 84 aa3.86□□□□□ -1.79
CTNNA1-216ENST00000519489 MPDU1O75352 247 aa3.86□□□□□ -1.79
CTNNA1-216ENST00000519489 HLA-DMAP28067 261 aa3.86□□□□□ -1.79
CTNNA1-216ENST00000519489 PHLDA2Q53GA4 152 aa3.86□□□□□ -1.79
CTNNA1-216ENST00000519489 IDNKQ5T6J7 187 aa3.86□□□□□ -1.79
CTNNA1-216ENST00000519489 TMEM91Q6ZNR0 172 aa3.86□□□□□ -1.79
CTNNA1-216ENST00000519489 KRTAP11-1Q8IUC1 163 aa3.86□□□□□ -1.79
CTNNA1-216ENST00000519489 BEST4Q8NFU0 473 aa3.86□□□□□ -1.79
CTNNA1-216ENST00000519489 SUN5Q8TC36 379 aa3.86□□□□□ -1.79
CTNNA1-216ENST00000519489 RPL36ALQ969Q0 106 aaKnown RBP3.86□□□□□ -1.79
CTNNA1-216ENST00000519489 RAB24Q969Q5 203 aa3.86□□□□□ -1.79
CTNNA1-216ENST00000519489 ODF3Q96PU9 254 aa3.86□□□□□ -1.79
CTNNA1-216ENST00000519489 ZNF331Q9NQX6 463 aaPredicted RBP3.86□□□□□ -1.79
CTNNA1-216ENST00000519489 IGHV3-73A0A0B4J1V6 119 aa3.85□□□□□ -1.79
CTNNA1-216ENST00000519489 TRAV1-1A0A0B4J248 108 aa3.85□□□□□ -1.79
CTNNA1-216ENST00000519489 hDV102S1A0JD36 115 aa3.85□□□□□ -1.79
CTNNA1-216ENST00000519489 FAM24AA6NFZ4 105 aa3.85□□□□□ -1.79
CTNNA1-216ENST00000519489 H3BRN7 92 aa3.85□□□□□ -1.79
CTNNA1-216ENST00000519489 TRIAP1O43715 76 aa3.85□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms