RNA–Protein interactions for RNA: ENST00000518877.1

PCM1-208, Transcript of pericentriolar material 1, humanhuman

TSL 3

Gene PCM1, Length 316 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-208ENST00000518877 ARL5BQ96KC2 179 aa-0.68□□□□□ -2.52
PCM1-208ENST00000518877 IMUPQ9GZP8 106 aa-0.68□□□□□ -2.52
PCM1-208ENST00000518877 CACYBPQ9HB71 228 aaKnown RBP-0.68□□□□□ -2.52
PCM1-208ENST00000518877 POPDC3Q9HBV1 291 aa-0.68□□□□□ -2.52
PCM1-208ENST00000518877 SRRM2Q9UQ35 2752 aaKnown RBP-0.68□□□□□ -2.52
PCM1-208ENST00000518877 ZANQ9Y493 2812 aa-0.69□□□□□ -2.52
PCM1-208ENST00000518877 NUP210LQ5VU65 1888 aa-0.69□□□□□ -2.52
PCM1-208ENST00000518877 LPAP08519 4548 aa-0.69□□□□□ -2.52
PCM1-208ENST00000518877 A6NN06 94 aa-0.69□□□□□ -2.52
PCM1-208ENST00000518877 CYBAP13498 195 aa-0.69□□□□□ -2.52
PCM1-208ENST00000518877 IDO1P14902 403 aa-0.69□□□□□ -2.52
PCM1-208ENST00000518877 NFYBP25208 207 aa-0.69□□□□□ -2.52
PCM1-208ENST00000518877 TMBIM6P55061 237 aa-0.69□□□□□ -2.52
PCM1-208ENST00000518877 VBP1P61758 197 aa-0.69□□□□□ -2.52
PCM1-208ENST00000518877 KLRD1Q13241 179 aa-0.69□□□□□ -2.52
PCM1-208ENST00000518877 MSMO1Q15800 293 aa-0.69□□□□□ -2.52
PCM1-208ENST00000518877 SPINK13Q1W4C9 94 aa-0.69□□□□□ -2.52
PCM1-208ENST00000518877 LINC00299Q6ZSB3 139 aa-0.69□□□□□ -2.52
PCM1-208ENST00000518877 VMO1Q7Z5L0 202 aa-0.69□□□□□ -2.52
PCM1-208ENST00000518877 LINC00269Q8N2A0 174 aa-0.69□□□□□ -2.52
PCM1-208ENST00000518877 GNPDA2Q8TDQ7 276 aa-0.69□□□□□ -2.52
PCM1-208ENST00000518877 ZNF714Q96N38 554 aa-0.69□□□□□ -2.52
PCM1-208ENST00000518877 LPAR5Q9H1C0 372 aa-0.69□□□□□ -2.52
PCM1-208ENST00000518877 ESPL1Q14674 2120 aa-0.7□□□□□ -2.52
PCM1-208ENST00000518877 FRMPD1Q5SYB0 1578 aa-0.7□□□□□ -2.52
PCM1-208ENST00000518877 KMT2AQ03164 3969 aa-0.7□□□□□ -2.52
PCM1-208ENST00000518877 FAM159BA6NKW6 160 aa-0.7□□□□□ -2.52
PCM1-208ENST00000518877 GGCTO75223 188 aaKnown RBP-0.7□□□□□ -2.52
PCM1-208ENST00000518877 RPP14O95059 124 aaKnown RBP-0.7□□□□□ -2.52
PCM1-208ENST00000518877 C1QBP02746 253 aa-0.7□□□□□ -2.52
PCM1-208ENST00000518877 XAF1Q6GPH4 301 aa-0.7□□□□□ -2.52
PCM1-208ENST00000518877 OR8J2Q8NGG1 315 aa-0.7□□□□□ -2.52
PCM1-208ENST00000518877 ADGRL3Q9HAR2 1447 aa-0.71□□□□□ -2.52
PCM1-208ENST00000518877 NBDYA0A0U1RRE5 68 aa-0.71□□□□□ -2.52
PCM1-208ENST00000518877 RER1O15258 196 aa-0.71□□□□□ -2.52
PCM1-208ENST00000518877 SULT1C4O75897 302 aa-0.71□□□□□ -2.52
PCM1-208ENST00000518877 IGHV3-30P01768 117 aa-0.71□□□□□ -2.52
PCM1-208ENST00000518877 IGHV3-30-5P0DP03 117 aa-0.71□□□□□ -2.52
PCM1-208ENST00000518877 MYL6P60660 151 aa-0.71□□□□□ -2.52
PCM1-208ENST00000518877 TAF1AQ15573 450 aaPredicted RBP-0.71□□□□□ -2.52
PCM1-208ENST00000518877 GOLT1AQ6ZVE7 132 aa-0.71□□□□□ -2.52
PCM1-208ENST00000518877 NAT8BQ9UHF3 227 aa-0.71□□□□□ -2.52
PCM1-208ENST00000518877 TRPM7Q96QT4 1865 aa-0.71□□□□□ -2.52
PCM1-208ENST00000518877 ZNF292O60281 2723 aa-0.72□□□□□ -2.52
PCM1-208ENST00000518877 PKD1L1Q8TDX9 2849 aa-0.72□□□□□ -2.52
PCM1-208ENST00000518877 LOC107984156A0A0G2JMH3 177 aa-0.72□□□□□ -2.52
PCM1-208ENST00000518877 LOC101927531A0A1B0GV80 90 aa-0.72□□□□□ -2.52
PCM1-208ENST00000518877 HMGB3O15347 200 aaKnown RBP-0.72□□□□□ -2.52
PCM1-208ENST00000518877 PIAS1O75925 651 aa-0.72□□□□□ -2.52
PCM1-208ENST00000518877 IFNA7P01567 189 aa-0.72□□□□□ -2.52
PCM1-208ENST00000518877 ITGB3BPQ13352 177 aaPredicted RBP-0.72□□□□□ -2.52
PCM1-208ENST00000518877 DIAPH2-AS1Q14236 149 aa-0.72□□□□□ -2.52
PCM1-208ENST00000518877 CSAG1Q6PB30 78 aa-0.72□□□□□ -2.52
PCM1-208ENST00000518877 ARL17AQ8IVW1 177 aa-0.72□□□□□ -2.52
PCM1-208ENST00000518877 PRAP1Q96NZ9 151 aa-0.72□□□□□ -2.52
PCM1-208ENST00000518877 TANC1Q9C0D5 1861 aa-0.72□□□□□ -2.52
PCM1-208ENST00000518877 DCHS2Q6V1P9 2916 aa-0.72□□□□□ -2.53
PCM1-208ENST00000518877 HUWE1Q7Z6Z7 4374 aaKnown RBP-0.73□□□□□ -2.53
PCM1-208ENST00000518877 PRORSD1PA6NEY8 169 aa-0.73□□□□□ -2.53
PCM1-208ENST00000518877 BANF1O75531 89 aa-0.73□□□□□ -2.53
PCM1-208ENST00000518877 FXYD3Q14802 87 aa-0.73□□□□□ -2.53
PCM1-208ENST00000518877 NEDD8Q15843 81 aa-0.73□□□□□ -2.53
PCM1-208ENST00000518877 C5orf56Q8N8D9 126 aa-0.73□□□□□ -2.53
PCM1-208ENST00000518877 OR10X1Q8NGY0 326 aa-0.73□□□□□ -2.53
PCM1-208ENST00000518877 FAM213BQ8TBF2 198 aa-0.73□□□□□ -2.53
PCM1-208ENST00000518877 CST11Q9H112 138 aa-0.73□□□□□ -2.53
PCM1-208ENST00000518877 ENY2Q9NPA8 101 aa-0.73□□□□□ -2.53
PCM1-208ENST00000518877 FAM32AQ9Y421 112 aaKnown RBP-0.73□□□□□ -2.53
PCM1-208ENST00000518877 DSPPQ9NZW4 1301 aa-0.73□□□□□ -2.53
PCM1-208ENST00000518877 TRPM1Q7Z4N2 1603 aa-0.74□□□□□ -2.53
PCM1-208ENST00000518877 UBR2Q8IWV8 1755 aa-0.74□□□□□ -2.53
PCM1-208ENST00000518877 TMEM114B3SHH9 223 aa-0.74□□□□□ -2.53
PCM1-208ENST00000518877 EVI2AP22794 236 aa-0.74□□□□□ -2.53
PCM1-208ENST00000518877 RPS3P23396 243 aaKnown RBP eCLIP-0.74□□□□□ -2.53
PCM1-208ENST00000518877 VMA21Q3ZAQ7 101 aa-0.74□□□□□ -2.53
PCM1-208ENST00000518877 GPX7Q96SL4 187 aaPredicted RBP-0.74□□□□□ -2.53
PCM1-208ENST00000518877 PTPN13Q12923 2485 aa-0.74□□□□□ -2.53
PCM1-208ENST00000518877 NINQ8N4C6 2090 aa-0.74□□□□□ -2.53
PCM1-208ENST00000518877 ATG2AQ2TAZ0 1938 aa-0.75□□□□□ -2.53
PCM1-208ENST00000518877 TENM2Q9NT68 2774 aa-0.75□□□□□ -2.53
PCM1-208ENST00000518877 NCALDP61601 193 aa-0.75□□□□□ -2.53
PCM1-208ENST00000518877 POU6F1Q14863 301 aa-0.75□□□□□ -2.53
PCM1-208ENST00000518877 PTRHD1Q6GMV3 140 aaKnown RBP-0.75□□□□□ -2.53
PCM1-208ENST00000518877 NMNAT1Q9HAN9 279 aaPredicted RBP-0.75□□□□□ -2.53
PCM1-208ENST00000518877 TAF9BQ9HBM6 251 aa-0.75□□□□□ -2.53
PCM1-208ENST00000518877 PTPRQQ9UMZ3 2332 aa-0.75□□□□□ -2.53
PCM1-208ENST00000518877 MED13LQ71F56 2210 aa-0.76□□□□□ -2.53
PCM1-208ENST00000518877 SMIM23A6NLE4 172 aa-0.76□□□□□ -2.53
PCM1-208ENST00000518877 NIPSNAP2O75323 286 aa-0.76□□□□□ -2.53
PCM1-208ENST00000518877 CST7O76096 145 aa-0.76□□□□□ -2.53
PCM1-208ENST00000518877 TRGC2P03986 189 aa-0.76□□□□□ -2.53
PCM1-208ENST00000518877 IFITM1P13164 125 aa-0.76□□□□□ -2.53
PCM1-208ENST00000518877 PHBP35232 272 aa-0.76□□□□□ -2.53
PCM1-208ENST00000518877 FAM216BQ8N7L0 139 aa-0.76□□□□□ -2.53
PCM1-208ENST00000518877 C5orf17Q8NAS9 161 aa-0.76□□□□□ -2.53
PCM1-208ENST00000518877 C9orf16Q9BUW7 83 aa-0.76□□□□□ -2.53
PCM1-208ENST00000518877 PLB1Q6P1J6 1458 aa-0.76□□□□□ -2.53
PCM1-208ENST00000518877 AFDNP55196 1824 aaKnown RBP-0.77□□□□□ -2.53
PCM1-208ENST00000518877 PCF11O94913 1555 aaKnown RBP-0.77□□□□□ -2.53
PCM1-208ENST00000518877 A0A096LNT2 108 aa-0.77□□□□□ -2.53
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms