RNA–Protein interactions for RNA: ENST00000518716.1

PABPC1-207, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2

Gene PABPC1, Length 694 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-207ENST00000518716 SPSB3Q6PJ21 355 aa4.34□□□□□ -1.71
PABPC1-207ENST00000518716 C19orf35Q6ZS72 473 aa4.34□□□□□ -1.71
PABPC1-207ENST00000518716 MOB1BQ7L9L4 216 aa4.34□□□□□ -1.71
PABPC1-207ENST00000518716 PRSS48Q7RTY5 328 aa4.34□□□□□ -1.71
PABPC1-207ENST00000518716 CEACAM19Q7Z692 300 aa4.34□□□□□ -1.71
PABPC1-207ENST00000518716 ZNF645Q8N7E2 425 aa4.34□□□□□ -1.71
PABPC1-207ENST00000518716 POM121L12Q8N7R1 296 aa4.34□□□□□ -1.71
PABPC1-207ENST00000518716 C15orf40Q8WUR7 153 aa4.34□□□□□ -1.71
PABPC1-207ENST00000518716 HIST1H2BAQ96A08 127 aa4.34□□□□□ -1.71
PABPC1-207ENST00000518716 GALNT14Q96FL9 552 aa4.34□□□□□ -1.71
PABPC1-207ENST00000518716 ZNF414Q96IQ9 312 aa4.34□□□□□ -1.71
PABPC1-207ENST00000518716 SLC35E1Q96K37 410 aa4.34□□□□□ -1.71
PABPC1-207ENST00000518716 ATP5SQ99766 215 aa4.34□□□□□ -1.71
PABPC1-207ENST00000518716 RARRES2Q99969 163 aa4.34□□□□□ -1.71
PABPC1-207ENST00000518716 SAMD10Q9BYL1 202 aa4.34□□□□□ -1.71
PABPC1-207ENST00000518716 AAMDCQ9H7C9 122 aa4.34□□□□□ -1.71
PABPC1-207ENST00000518716 FGF20Q9NP95 211 aaPredicted RBP4.34□□□□□ -1.71
PABPC1-207ENST00000518716 SMCO4Q9NRQ5 59 aa4.34□□□□□ -1.71
PABPC1-207ENST00000518716 MRPL27Q9P0M9 148 aaKnown RBP4.34□□□□□ -1.71
PABPC1-207ENST00000518716 RAB22AQ9UL26 194 aa4.34□□□□□ -1.71
PABPC1-207ENST00000518716 ZNF257Q9Y2Q1 563 aa4.34□□□□□ -1.71
PABPC1-207ENST00000518716 ETV7Q9Y603 341 aa4.34□□□□□ -1.71
PABPC1-207ENST00000518716 PRSS46E5RG02 174 aa4.33□□□□□ -1.72
PABPC1-207ENST00000518716 J3QRK9 145 aa4.33□□□□□ -1.72
PABPC1-207ENST00000518716 K7EN84 100 aa4.33□□□□□ -1.72
PABPC1-207ENST00000518716 APOC3P02656 99 aa4.33□□□□□ -1.72
PABPC1-207ENST00000518716 GIG44P09565 113 aaPredicted RBP4.33□□□□□ -1.72
PABPC1-207ENST00000518716 RPL35AP18077 110 aaKnown RBP4.33□□□□□ -1.72
PABPC1-207ENST00000518716 NPY1RP25929 384 aa4.33□□□□□ -1.72
PABPC1-207ENST00000518716 ATP6V0CP27449 155 aa4.33□□□□□ -1.72
PABPC1-207ENST00000518716 HSPE1P61604 102 aaKnown RBP4.33□□□□□ -1.72
PABPC1-207ENST00000518716 RPS27AP62979 156 aaKnown RBP4.33□□□□□ -1.72
PABPC1-207ENST00000518716 HLA-DRB3P79483 266 aa4.33□□□□□ -1.72
PABPC1-207ENST00000518716 CD164Q04900 197 aa4.33□□□□□ -1.72
PABPC1-207ENST00000518716 UNC119Q13432 240 aa4.33□□□□□ -1.72
PABPC1-207ENST00000518716 Q5BKY6 102 aa4.33□□□□□ -1.72
PABPC1-207ENST00000518716 SOHLH1Q5JUK2 328 aa4.33□□□□□ -1.72
PABPC1-207ENST00000518716 C10orf55Q5SWW7 151 aa4.33□□□□□ -1.72
PABPC1-207ENST00000518716 GLT8D1Q68CQ7 371 aa4.33□□□□□ -1.72
PABPC1-207ENST00000518716 OR10K2Q6IF99 312 aa4.33□□□□□ -1.72
PABPC1-207ENST00000518716 CLEC19AQ6UXS0 136 aa4.33□□□□□ -1.72
PABPC1-207ENST00000518716 GTF2H5Q6ZYL4 71 aa4.33□□□□□ -1.72
PABPC1-207ENST00000518716 Q8NAQ8 132 aa4.33□□□□□ -1.72
PABPC1-207ENST00000518716 BORCS7Q96B45 105 aa4.33□□□□□ -1.72
PABPC1-207ENST00000518716 NEDD4LQ96PU5 975 aa4.33□□□□□ -1.72
PABPC1-207ENST00000518716 SPIN2AQ99865 258 aa4.33□□□□□ -1.72
PABPC1-207ENST00000518716 SPIN2BQ9BPZ2 258 aa4.33□□□□□ -1.72
PABPC1-207ENST00000518716 HDHD3Q9BSH5 251 aaPredicted RBP4.33□□□□□ -1.72
PABPC1-207ENST00000518716 NAA50Q9GZZ1 169 aaKnown RBP4.33□□□□□ -1.72
PABPC1-207ENST00000518716 MED28Q9H204 178 aa4.33□□□□□ -1.72
PABPC1-207ENST00000518716 FNDC4Q9H6D8 234 aaPredicted RBP4.33□□□□□ -1.72
PABPC1-207ENST00000518716 RNF167Q9H6Y7 350 aa4.33□□□□□ -1.72
PABPC1-207ENST00000518716 COMMD9Q9P000 198 aa4.33□□□□□ -1.72
PABPC1-207ENST00000518716 NAT8BQ9UHF3 227 aa4.33□□□□□ -1.72
PABPC1-207ENST00000518716 AK3Q9UIJ7 227 aa4.33□□□□□ -1.72
PABPC1-207ENST00000518716 FLG2Q5D862 2391 aaPredicted RBP4.33□□□□□ -1.72
PABPC1-207ENST00000518716 IGLV11-55A0A075B6I3 123 aa4.32□□□□□ -1.72
PABPC1-207ENST00000518716 IGHV4-4A0A075B6R2 117 aa4.32□□□□□ -1.72
PABPC1-207ENST00000518716 TRAV18A0A075B6X5 111 aa4.32□□□□□ -1.72
PABPC1-207ENST00000518716 A0A1W2PPK0 400 aa4.32□□□□□ -1.72
PABPC1-207ENST00000518716 TMEM14DPA8MWL7 114 aa4.32□□□□□ -1.72
PABPC1-207ENST00000518716 G3V3Q6 166 aa4.32□□□□□ -1.72
PABPC1-207ENST00000518716 J3KT08 172 aa4.32□□□□□ -1.72
PABPC1-207ENST00000518716 DEFB4AO15263 64 aa4.32□□□□□ -1.72
PABPC1-207ENST00000518716 GNG7O60262 68 aa4.32□□□□□ -1.72
PABPC1-207ENST00000518716 IGHV3-23P01764 117 aa4.32□□□□□ -1.72
PABPC1-207ENST00000518716 RBMY1A1P0DJD3 496 aaKnown RBP4.32□□□□□ -1.72
PABPC1-207ENST00000518716 RBMY1CP0DJD4 496 aa4.32□□□□□ -1.72
PABPC1-207ENST00000518716 SAA1P0DJI8 122 aaPredicted RBP4.32□□□□□ -1.72
PABPC1-207ENST00000518716 DUTP33316 252 aaKnown RBP4.32□□□□□ -1.72
PABPC1-207ENST00000518716 HRH1P35367 487 aa4.32□□□□□ -1.72
PABPC1-207ENST00000518716 TAS2R20P59543 309 aa4.32□□□□□ -1.72
PABPC1-207ENST00000518716 UBE2MP61081 183 aaKnown RBP4.32□□□□□ -1.72
PABPC1-207ENST00000518716 RPL8P62917 257 aaKnown RBP4.32□□□□□ -1.72
PABPC1-207ENST00000518716 ST3GAL4Q11206 333 aa4.32□□□□□ -1.72
PABPC1-207ENST00000518716 PLA2G7Q13093 441 aa4.32□□□□□ -1.72
PABPC1-207ENST00000518716 RBMY1FQ15415 496 aaKnown RBP4.32□□□□□ -1.72
PABPC1-207ENST00000518716 IQCJQ1A5X6 159 aa4.32□□□□□ -1.72
PABPC1-207ENST00000518716 C1orf100Q5SVJ3 147 aa4.32□□□□□ -1.72
PABPC1-207ENST00000518716 SLC25A42Q86VD7 318 aa4.32□□□□□ -1.72
PABPC1-207ENST00000518716 SNX29P2Q8IUI4 249 aa4.32□□□□□ -1.72
PABPC1-207ENST00000518716 FAM24BQ8N5W8 94 aa4.32□□□□□ -1.72
PABPC1-207ENST00000518716 GATD1Q8NB37 220 aa4.32□□□□□ -1.72
PABPC1-207ENST00000518716 OSR1Q8TAX0 266 aaPredicted RBP4.32□□□□□ -1.72
PABPC1-207ENST00000518716 THAP6Q8TBB0 222 aa4.32□□□□□ -1.72
PABPC1-207ENST00000518716 TMEM190Q8WZ59 177 aa4.32□□□□□ -1.72
PABPC1-207ENST00000518716 ADTRPQ96IZ2 230 aa4.32□□□□□ -1.72
PABPC1-207ENST00000518716 DERL3Q96Q80 235 aa4.32□□□□□ -1.72
PABPC1-207ENST00000518716 RNF126Q9BV68 326 aa4.32□□□□□ -1.72
PABPC1-207ENST00000518716 SH3BGRL3Q9H299 93 aa4.32□□□□□ -1.72
PABPC1-207ENST00000518716 CKLFQ9UBR5 152 aa4.32□□□□□ -1.72
PABPC1-207ENST00000518716 CARHSP1Q9Y2V2 147 aaKnown RBP4.32□□□□□ -1.72
PABPC1-207ENST00000518716 A0A087WX48 190 aa4.31□□□□□ -1.72
PABPC1-207ENST00000518716 TRBV6-7A0A0A0MS04 114 aa4.31□□□□□ -1.72
PABPC1-207ENST00000518716 TRBV7-1A0A0A6YYK4 115 aa4.31□□□□□ -1.72
PABPC1-207ENST00000518716 MEIS3P1A6NDR6 274 aa4.31□□□□□ -1.72
PABPC1-207ENST00000518716 M0R2Z0 102 aa4.31□□□□□ -1.72
PABPC1-207ENST00000518716 SOCS1O15524 211 aa4.31□□□□□ -1.72
PABPC1-207ENST00000518716 AMBPP02760 352 aa4.31□□□□□ -1.72
PABPC1-207ENST00000518716 MYOD1P15172 320 aa4.31□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms