RNA–Protein interactions for RNA: ENST00000517990.5

PABPC1-204, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 5

Gene PABPC1, Length 487 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-204ENST00000517990 VSIG2Q96IQ7 327 aa4.21□□□□□ -1.74
PABPC1-204ENST00000517990 PRRT1Q99946 306 aa4.21□□□□□ -1.74
PABPC1-204ENST00000517990 LINC00467Q9BRT7 94 aa4.21□□□□□ -1.74
PABPC1-204ENST00000517990 RTBDNQ9BSG5 229 aaPredicted RBP4.21□□□□□ -1.74
PABPC1-204ENST00000517990 SHANK2-AS3Q9BTD1 123 aa4.21□□□□□ -1.74
PABPC1-204ENST00000517990 PRO0255Q9UI72 69 aa4.21□□□□□ -1.74
PABPC1-204ENST00000517990 SCP2D1Q9UJQ7 156 aa4.21□□□□□ -1.74
PABPC1-204ENST00000517990 IGKV1OR2-108A0A075B7D4 117 aa4.2□□□□□ -1.74
PABPC1-204ENST00000517990 DUXBA0A1W2PPF3 345 aa4.2□□□□□ -1.74
PABPC1-204ENST00000517990 SMCO3A2RU48 225 aa4.2□□□□□ -1.74
PABPC1-204ENST00000517990 H3BRN7 92 aa4.2□□□□□ -1.74
PABPC1-204ENST00000517990 ZNF324O75467 553 aaPredicted RBP4.2□□□□□ -1.74
PABPC1-204ENST00000517990 OR5G3P0C626 314 aa4.2□□□□□ -1.74
PABPC1-204ENST00000517990 AKAIN1P0CW23 69 aa4.2□□□□□ -1.74
PABPC1-204ENST00000517990 IAPPP10997 89 aa4.2□□□□□ -1.74
PABPC1-204ENST00000517990 SRIP30626 198 aa4.2□□□□□ -1.74
PABPC1-204ENST00000517990 TGFBR1P36897 503 aa4.2□□□□□ -1.74
PABPC1-204ENST00000517990 SELENOTP62341 195 aa4.2□□□□□ -1.74
PABPC1-204ENST00000517990 ANKRD39Q53RE8 183 aa4.2□□□□□ -1.74
PABPC1-204ENST00000517990 GFI1BQ5VTD9 330 aa4.2□□□□□ -1.74
PABPC1-204ENST00000517990 CYP2G1PQ6ZSU1 146 aa4.2□□□□□ -1.74
PABPC1-204ENST00000517990 Q6ZTI0 123 aa4.2□□□□□ -1.74
PABPC1-204ENST00000517990 OR4D10Q8NGI6 311 aa4.2□□□□□ -1.74
PABPC1-204ENST00000517990 OR51S1Q8NGJ8 323 aa4.2□□□□□ -1.74
PABPC1-204ENST00000517990 EXTL2Q9UBQ6 330 aa4.2□□□□□ -1.74
PABPC1-204ENST00000517990 GPR132Q9UNW8 380 aa4.2□□□□□ -1.74
PABPC1-204ENST00000517990 FUT9Q9Y231 359 aa4.2□□□□□ -1.74
PABPC1-204ENST00000517990 SRRM2Q9UQ35 2752 aaKnown RBP4.2□□□□□ -1.74
PABPC1-204ENST00000517990 TRAV12-3A0A0B4J271 114 aa4.19□□□□□ -1.74
PABPC1-204ENST00000517990 J3KRW8 73 aa4.19□□□□□ -1.74
PABPC1-204ENST00000517990 OXTP01178 125 aa4.19□□□□□ -1.74
PABPC1-204ENST00000517990 CRYGDP07320 174 aa4.19□□□□□ -1.74
PABPC1-204ENST00000517990 LINC00869P0C866 280 aa4.19□□□□□ -1.74
PABPC1-204ENST00000517990 SLC25A6P12236 298 aa4.19□□□□□ -1.74
PABPC1-204ENST00000517990 GATA2P23769 480 aaPredicted RBP4.19□□□□□ -1.74
PABPC1-204ENST00000517990 HAMPP81172 84 aa4.19□□□□□ -1.74
PABPC1-204ENST00000517990 PXDC1Q5TGL8 231 aa4.19□□□□□ -1.74
PABPC1-204ENST00000517990 LYPD5Q6UWN5 251 aa4.19□□□□□ -1.74
PABPC1-204ENST00000517990 LYZL2Q7Z4W2 148 aa4.19□□□□□ -1.74
PABPC1-204ENST00000517990 BPIFA4PQ86YQ2 179 aa4.19□□□□□ -1.74
PABPC1-204ENST00000517990 ST6GAL2Q96JF0 529 aa4.19□□□□□ -1.74
PABPC1-204ENST00000517990 ODF3Q96PU9 254 aa4.19□□□□□ -1.74
PABPC1-204ENST00000517990 TXNDC17Q9BRA2 123 aa4.19□□□□□ -1.74
PABPC1-204ENST00000517990 HHLA3Q9XRX5 114 aa4.19□□□□□ -1.74
PABPC1-204ENST00000517990 STRAPQ9Y3F4 350 aaKnown RBP4.19□□□□□ -1.74
PABPC1-204ENST00000517990 PXMP4Q9Y6I8 212 aa4.19□□□□□ -1.74
PABPC1-204ENST00000517990 VPS13BQ7Z7G8 4022 aa4.18□□□□□ -1.74
PABPC1-204ENST00000517990 TRGV4A0A0C4DH28 118 aa4.18□□□□□ -1.74
PABPC1-204ENST00000517990 PMS2P5A8MQ11 134 aa4.18□□□□□ -1.74
PABPC1-204ENST00000517990 ANKRD65E5RJM6 399 aa4.18□□□□□ -1.74
PABPC1-204ENST00000517990 WRBO00258 174 aa4.18□□□□□ -1.74
PABPC1-204ENST00000517990 SYNGR2O43760 224 aa4.18□□□□□ -1.74
PABPC1-204ENST00000517990 ORM1P02763 201 aa4.18□□□□□ -1.74
PABPC1-204ENST00000517990 SLC25A5P05141 298 aaKnown RBP4.18□□□□□ -1.74
PABPC1-204ENST00000517990 PLP1P60201 277 aa4.18□□□□□ -1.74
PABPC1-204ENST00000517990 TDRG1Q3Y452 100 aa4.18□□□□□ -1.74
PABPC1-204ENST00000517990 SPANXN5Q5MJ07 72 aa4.18□□□□□ -1.74
PABPC1-204ENST00000517990 ACOT7LQ6ZUV0 252 aa4.18□□□□□ -1.74
PABPC1-204ENST00000517990 SH2D6Q7Z4S9 175 aa4.18□□□□□ -1.74
PABPC1-204ENST00000517990 CLVS1Q8IUQ0 354 aaPredicted RBP4.18□□□□□ -1.74
PABPC1-204ENST00000517990 EIF4E3Q8N5X7 224 aaKnown RBP4.18□□□□□ -1.74
PABPC1-204ENST00000517990 LRTM2Q8N967 370 aa4.18□□□□□ -1.74
PABPC1-204ENST00000517990 ARPC5LQ9BPX5 153 aa4.18□□□□□ -1.74
PABPC1-204ENST00000517990 ZNF331Q9NQX6 463 aaPredicted RBP4.18□□□□□ -1.74
PABPC1-204ENST00000517990 GSN-AS1Q9NRJ2 163 aa4.18□□□□□ -1.74
PABPC1-204ENST00000517990 RABL2AQ9UBK7 228 aaPredicted RBP4.18□□□□□ -1.74
PABPC1-204ENST00000517990 RABL2BQ9UNT1 228 aa4.18□□□□□ -1.74
PABPC1-204ENST00000517990 C7orf71A4D174 169 aa4.17□□□□□ -1.74
PABPC1-204ENST00000517990 SPINK4O60575 86 aa4.17□□□□□ -1.74
PABPC1-204ENST00000517990 PRAF2O60831 178 aa4.17□□□□□ -1.74
PABPC1-204ENST00000517990 MPDU1O75352 247 aa4.17□□□□□ -1.74
PABPC1-204ENST00000517990 IGHV3-53P01767 116 aa4.17□□□□□ -1.74
PABPC1-204ENST00000517990 CRYBA4P53673 196 aa4.17□□□□□ -1.74
PABPC1-204ENST00000517990 TCL1AP56279 114 aa4.17□□□□□ -1.74
PABPC1-204ENST00000517990 ZNF415Q09FC8 603 aa4.17□□□□□ -1.74
PABPC1-204ENST00000517990 GUK1Q16774 197 aa4.17□□□□□ -1.74
PABPC1-204ENST00000517990 ANXA2RQ3ZCQ2 193 aa4.17□□□□□ -1.74
PABPC1-204ENST00000517990 C4orf46Q504U0 113 aa4.17□□□□□ -1.74
PABPC1-204ENST00000517990 IBA57Q5T440 356 aaKnown RBP4.17□□□□□ -1.74
PABPC1-204ENST00000517990 FAAP20Q6NZ36 180 aa4.17□□□□□ -1.74
PABPC1-204ENST00000517990 TMEM182Q6ZP80 229 aaPredicted RBP4.17□□□□□ -1.74
PABPC1-204ENST00000517990 Q8N814 137 aa4.17□□□□□ -1.74
PABPC1-204ENST00000517990 ZNF431Q8TF32 576 aaPredicted RBP4.17□□□□□ -1.74
PABPC1-204ENST00000517990 YIPF6Q96EC8 236 aa4.17□□□□□ -1.74
PABPC1-204ENST00000517990 VGLL1Q99990 258 aa4.17□□□□□ -1.74
PABPC1-204ENST00000517990 TM2D2Q9BX73 214 aa4.17□□□□□ -1.74
PABPC1-204ENST00000517990 ARL6Q9H0F7 186 aa4.17□□□□□ -1.74
PABPC1-204ENST00000517990 ARV1Q9H2C2 271 aa4.17□□□□□ -1.74
PABPC1-204ENST00000517990 MGAT4CQ9UBM8 478 aa4.17□□□□□ -1.74
PABPC1-204ENST00000517990 RCL1Q9Y2P8 373 aaKnown RBP4.17□□□□□ -1.74
PABPC1-204ENST00000517990 A0A087WXM4 84 aa4.16□□□□□ -1.74
PABPC1-204ENST00000517990 IGHV3-38A0A0C4DH36 116 aa4.16□□□□□ -1.74
PABPC1-204ENST00000517990 C9JCJ5 164 aa4.16□□□□□ -1.74
PABPC1-204ENST00000517990 E5RGE8 158 aa4.16□□□□□ -1.74
PABPC1-204ENST00000517990 FNDC10F2Z333 226 aa4.16□□□□□ -1.74
PABPC1-204ENST00000517990 GOSR2O14653 212 aa4.16□□□□□ -1.74
PABPC1-204ENST00000517990 RS1O15537 224 aa4.16□□□□□ -1.74
PABPC1-204ENST00000517990 RGS5O15539 181 aa4.16□□□□□ -1.74
PABPC1-204ENST00000517990 PITX3O75364 302 aa4.16□□□□□ -1.74
PABPC1-204ENST00000517990 FAUP35544 74 aaKnown RBP4.16□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 270.6 ms