RNA–Protein interactions for RNA: ENST00000517514.1

CLN8-202, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 4

Gene CLN8, Length 568 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-202ENST00000517514 ZNF705DP0CH99 300 aaPredicted RBP7.28□□□□□ -1.24
CLN8-202ENST00000517514 ZNF705BP0CI00 300 aaPredicted RBP7.28□□□□□ -1.24
CLN8-202ENST00000517514 ID1P41134 155 aa7.28□□□□□ -1.24
CLN8-202ENST00000517514 RANP62826 216 aaKnown RBP7.28□□□□□ -1.24
CLN8-202ENST00000517514 TRPT1Q86TN4 253 aaKnown RBP7.28□□□□□ -1.24
CLN8-202ENST00000517514 LYPD6BQ8NI32 183 aa7.28□□□□□ -1.24
CLN8-202ENST00000517514 PCNPQ8WW12 178 aaKnown RBP7.28□□□□□ -1.24
CLN8-202ENST00000517514 SRD5A3Q9H8P0 318 aa7.28□□□□□ -1.24
CLN8-202ENST00000517514 FAM74A7A6NL05 159 aa7.27□□□□□ -1.25
CLN8-202ENST00000517514 ZNF705EA8MWA4 302 aaPredicted RBP7.27□□□□□ -1.25
CLN8-202ENST00000517514 GIG44P09565 113 aaPredicted RBP7.27□□□□□ -1.25
CLN8-202ENST00000517514 HLA-DRB4P13762 266 aa7.27□□□□□ -1.25
CLN8-202ENST00000517514 CMC4P56277 68 aaPredicted RBP7.27□□□□□ -1.25
CLN8-202ENST00000517514 UBE2G2P60604 165 aa7.27□□□□□ -1.25
CLN8-202ENST00000517514 SNRPD3P62318 126 aaKnown RBP7.27□□□□□ -1.25
CLN8-202ENST00000517514 PSG9Q00887 426 aa7.27□□□□□ -1.25
CLN8-202ENST00000517514 SAMD13Q5VXD3 122 aa7.27□□□□□ -1.25
CLN8-202ENST00000517514 AMTNQ6UX39 209 aa7.27□□□□□ -1.25
CLN8-202ENST00000517514 FOXI2Q6ZQN5 318 aa7.27□□□□□ -1.25
CLN8-202ENST00000517514 CCDC28AQ8IWP9 274 aa7.27□□□□□ -1.25
CLN8-202ENST00000517514 LYPD1Q8N2G4 141 aa7.27□□□□□ -1.25
CLN8-202ENST00000517514 RPUSD4Q96CM3 377 aaKnown RBP7.27□□□□□ -1.25
CLN8-202ENST00000517514 MRPL53Q96EL3 112 aaKnown RBP7.27□□□□□ -1.25
CLN8-202ENST00000517514 SAV1Q9H4B6 383 aaPredicted RBP7.27□□□□□ -1.25
CLN8-202ENST00000517514 TMEM167BQ9NRX6 74 aa7.27□□□□□ -1.25
CLN8-202ENST00000517514 HLA-DRB4X5D2U9 266 aa7.27□□□□□ -1.25
CLN8-202ENST00000517514 TENM3Q9P273 2699 aa7.26□□□□□ -1.25
CLN8-202ENST00000517514 A0A1W2PRE2 83 aa7.26□□□□□ -1.25
CLN8-202ENST00000517514 PGPA6NDG6 321 aa7.26□□□□□ -1.25
CLN8-202ENST00000517514 NMBP08949 121 aa7.26□□□□□ -1.25
CLN8-202ENST00000517514 FRMD6-AS1P0C7T7 363 aa7.26□□□□□ -1.25
CLN8-202ENST00000517514 GNG5P63218 68 aa7.26□□□□□ -1.25
CLN8-202ENST00000517514 ACTL10Q5JWF8 245 aa7.26□□□□□ -1.25
CLN8-202ENST00000517514 IQCF2Q8IXL9 164 aa7.26□□□□□ -1.25
CLN8-202ENST00000517514 ZNF738Q8NE65 137 aa7.26□□□□□ -1.25
CLN8-202ENST00000517514 OR8A1Q8NGG7 326 aa7.26□□□□□ -1.25
CLN8-202ENST00000517514 LRRC20Q8TCA0 184 aa7.26□□□□□ -1.25
CLN8-202ENST00000517514 OTORQ9NRC9 128 aa7.26□□□□□ -1.25
CLN8-202ENST00000517514 IGKV2-40A0A087WW87 121 aaPredicted RBP7.25□□□□□ -1.25
CLN8-202ENST00000517514 DIRC3C9JPN6 131 aa7.25□□□□□ -1.25
CLN8-202ENST00000517514 PAGE4O60829 102 aa7.25□□□□□ -1.25
CLN8-202ENST00000517514 IGKV2D-40P01614 121 aaPredicted RBP7.25□□□□□ -1.25
CLN8-202ENST00000517514 RPL35AP18077 110 aaKnown RBP7.25□□□□□ -1.25
CLN8-202ENST00000517514 ATP5G3P48201 142 aa7.25□□□□□ -1.25
CLN8-202ENST00000517514 CNN1P51911 297 aaKnown RBP7.25□□□□□ -1.25
CLN8-202ENST00000517514 SUMO1P63165 101 aaKnown RBP7.25□□□□□ -1.25
CLN8-202ENST00000517514 ERCC8Q13216 396 aa7.25□□□□□ -1.25
CLN8-202ENST00000517514 PMS2P11Q13670 270 aa7.25□□□□□ -1.25
CLN8-202ENST00000517514 VGLL1Q99990 258 aa7.25□□□□□ -1.25
CLN8-202ENST00000517514 CLEC5AQ9NY25 188 aa7.25□□□□□ -1.25
CLN8-202ENST00000517514 PRELID1Q9Y255 219 aa7.25□□□□□ -1.25
CLN8-202ENST00000517514 NPIPB6E9PJ23 425 aa7.24□□□□□ -1.25
CLN8-202ENST00000517514 CT45A10P0DMU9 189 aa7.24□□□□□ -1.25
CLN8-202ENST00000517514 BLOC1S1P78537 153 aa7.24□□□□□ -1.25
CLN8-202ENST00000517514 MRAPQ8TCY5 172 aa7.24□□□□□ -1.25
CLN8-202ENST00000517514 FAM19A4Q96LR4 140 aa7.24□□□□□ -1.25
CLN8-202ENST00000517514 CLUHP3Q96NS8 147 aa7.24□□□□□ -1.25
CLN8-202ENST00000517514 ASCL2Q99929 193 aa7.24□□□□□ -1.25
CLN8-202ENST00000517514 AGPAT4-IT1Q9H0P7 198 aa7.24□□□□□ -1.25
CLN8-202ENST00000517514 IFNA7P01567 189 aa7.23□□□□□ -1.25
CLN8-202ENST00000517514 IGKV3-20P01619 116 aa7.23□□□□□ -1.25
CLN8-202ENST00000517514 IGLV2-11P01706 119 aa7.23□□□□□ -1.25
CLN8-202ENST00000517514 HBE1P02100 147 aa7.23□□□□□ -1.25
CLN8-202ENST00000517514 SLC25A5P05141 298 aaKnown RBP7.23□□□□□ -1.25
CLN8-202ENST00000517514 HIST1H1AQ02539 215 aaPredicted RBP7.23□□□□□ -1.25
CLN8-202ENST00000517514 KIR3DS1Q14943 382 aa7.23□□□□□ -1.25
CLN8-202ENST00000517514 HAGHQ16775 308 aa7.23□□□□□ -1.25
CLN8-202ENST00000517514 DEFB121Q5J5C9 76 aa7.23□□□□□ -1.25
CLN8-202ENST00000517514 C9orf47Q6ZRZ4 202 aa7.23□□□□□ -1.25
CLN8-202ENST00000517514 SBSPONQ8IVN8 264 aa7.23□□□□□ -1.25
CLN8-202ENST00000517514 STHQ8IWL8 128 aa7.23□□□□□ -1.25
CLN8-202ENST00000517514 ARL6IP6Q8N6S5 226 aa7.23□□□□□ -1.25
CLN8-202ENST00000517514 C5orf17Q8NAS9 161 aa7.23□□□□□ -1.25
CLN8-202ENST00000517514 SLC35B3Q9H1N7 401 aa7.23□□□□□ -1.25
CLN8-202ENST00000517514 AAMDCQ9H7C9 122 aa7.23□□□□□ -1.25
CLN8-202ENST00000517514 TUBA4BQ9H853 241 aa7.23□□□□□ -1.25
CLN8-202ENST00000517514 GNG13Q9P2W3 67 aa7.23□□□□□ -1.25
CLN8-202ENST00000517514 EPDR1Q9UM22 224 aa7.23□□□□□ -1.25
CLN8-202ENST00000517514 ARL2-SNX15V9GYD0 113 aa7.23□□□□□ -1.25
CLN8-202ENST00000517514 LOC102724200A0A096LPH7 203 aaPredicted RBP7.22□□□□□ -1.25
CLN8-202ENST00000517514 TRAV8-1A0A0A6YYK1 113 aa7.22□□□□□ -1.25
CLN8-202ENST00000517514 TEX46H3BTG2 121 aa7.22□□□□□ -1.25
CLN8-202ENST00000517514 CRXO43186 299 aaPredicted RBP7.22□□□□□ -1.25
CLN8-202ENST00000517514 DUSP14O95147 198 aaKnown RBP7.22□□□□□ -1.25
CLN8-202ENST00000517514 TCRAP04437 139 aa7.22□□□□□ -1.25
CLN8-202ENST00000517514 FXYD7P58549 80 aa7.22□□□□□ -1.25
CLN8-202ENST00000517514 EBLN2Q6P2I7 272 aa7.22□□□□□ -1.25
CLN8-202ENST00000517514 GOLT1AQ6ZVE7 132 aa7.22□□□□□ -1.25
CLN8-202ENST00000517514 CSNK1G2-AS1Q8NCQ2 148 aa7.22□□□□□ -1.25
CLN8-202ENST00000517514 OR4B1Q8NGF8 309 aa7.22□□□□□ -1.25
CLN8-202ENST00000517514 TVP23CQ96ET8 276 aa7.22□□□□□ -1.25
CLN8-202ENST00000517514 LINC00479Q96M42 142 aa7.22□□□□□ -1.25
CLN8-202ENST00000517514 RARRES2Q99969 163 aa7.22□□□□□ -1.25
CLN8-202ENST00000517514 MANBALQ9NQG1 85 aa7.22□□□□□ -1.25
CLN8-202ENST00000517514 LOC102723971A0A1B0GUV8 181 aa7.21□□□□□ -1.26
CLN8-202ENST00000517514 SCO2A0A1W2PP80 73 aa7.21□□□□□ -1.26
CLN8-202ENST00000517514 RBAKDNA6NC62 111 aa7.21□□□□□ -1.26
CLN8-202ENST00000517514 M0R2Z0 102 aa7.21□□□□□ -1.26
CLN8-202ENST00000517514 RBMY1A1P0DJD3 496 aaKnown RBP7.21□□□□□ -1.26
CLN8-202ENST00000517514 RBMY1CP0DJD4 496 aa7.21□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms