RNA–Protein interactions for RNA: ENST00000516060.1

SCARNA23-201, small Cajal body-specific RNA 23, humanhuman

BASIC

Gene SCARNA23, Length 130 nt, Biotype scaRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA23-201ENST00000516060 RSU1Q15404 277 aa-2.84□□□□□ -2.86
SCARNA23-201ENST00000516060 OR5D16Q8NGK9 328 aa-2.84□□□□□ -2.86
SCARNA23-201ENST00000516060 SERPINB11Q96P15 392 aa-2.84□□□□□ -2.86
SCARNA23-201ENST00000516060 MRPL36Q9P0J6 103 aaKnown RBP-2.84□□□□□ -2.86
SCARNA23-201ENST00000516060 NUP98P52948 1817 aa-2.84□□□□□ -2.86
SCARNA23-201ENST00000516060 DUXBA0A1W2PPF3 345 aa-2.85□□□□□ -2.87
SCARNA23-201ENST00000516060 hDV103S1A0JD37 113 aa-2.85□□□□□ -2.87
SCARNA23-201ENST00000516060 OR4C46A6NHA9 309 aa-2.85□□□□□ -2.87
SCARNA23-201ENST00000516060 TCRBP04435 133 aa-2.85□□□□□ -2.87
SCARNA23-201ENST00000516060 STAG3L2P0CL84 134 aa-2.85□□□□□ -2.87
SCARNA23-201ENST00000516060 RPL5P46777 297 aaKnown RBP-2.85□□□□□ -2.87
SCARNA23-201ENST00000516060 CDC34P49427 236 aaPredicted RBP-2.85□□□□□ -2.87
SCARNA23-201ENST00000516060 HACD4Q5VWC8 232 aa-2.85□□□□□ -2.87
SCARNA23-201ENST00000516060 DNM1P34Q6PK57 102 aa-2.85□□□□□ -2.87
SCARNA23-201ENST00000516060 Q6ZRX8 168 aa-2.85□□□□□ -2.87
SCARNA23-201ENST00000516060 ATP6V1C2Q8NEY4 427 aa-2.85□□□□□ -2.87
SCARNA23-201ENST00000516060 OR4K15Q8NH41 348 aa-2.85□□□□□ -2.87
SCARNA23-201ENST00000516060 TMEM242Q9NWH2 141 aa-2.85□□□□□ -2.87
SCARNA23-201ENST00000516060 CMTM6Q9NX76 183 aa-2.85□□□□□ -2.87
SCARNA23-201ENST00000516060 FBXO5Q9UKT4 447 aa-2.85□□□□□ -2.87
SCARNA23-201ENST00000516060 TMEM56-RWDD3S4R434 201 aa-2.85□□□□□ -2.87
SCARNA23-201ENST00000516060 KIAA1549LQ6ZVL6 1849 aa-2.85□□□□□ -2.87
SCARNA23-201ENST00000516060 CDK12Q9NYV4 1490 aaPredicted RBP-2.85□□□□□ -2.87
SCARNA23-201ENST00000516060 NCOA1Q15788 1441 aa-2.85□□□□□ -2.87
SCARNA23-201ENST00000516060 PKD1L2Q7Z442 2459 aa-2.86□□□□□ -2.87
SCARNA23-201ENST00000516060 TINCRA0A1B0GVN0 87 aa-2.86□□□□□ -2.87
SCARNA23-201ENST00000516060 RAB19A4D1S5 217 aa-2.86□□□□□ -2.87
SCARNA23-201ENST00000516060 H0Y980 276 aa-2.86□□□□□ -2.87
SCARNA23-201ENST00000516060 HLA-DRB1P01911 266 aa-2.86□□□□□ -2.87
SCARNA23-201ENST00000516060 PHBP35232 272 aa-2.86□□□□□ -2.87
SCARNA23-201ENST00000516060 TNFAIP8L2Q6P589 184 aaPredicted RBP-2.86□□□□□ -2.87
SCARNA23-201ENST00000516060 C22orf39Q6P5X5 142 aa-2.86□□□□□ -2.87
SCARNA23-201ENST00000516060 FAM9BQ8IZU0 186 aa-2.86□□□□□ -2.87
SCARNA23-201ENST00000516060 ARL5BQ96KC2 179 aa-2.86□□□□□ -2.87
SCARNA23-201ENST00000516060 AP1S3Q96PC3 154 aa-2.86□□□□□ -2.87
SCARNA23-201ENST00000516060 C20orf27Q9GZN8 174 aa-2.86□□□□□ -2.87
SCARNA23-201ENST00000516060 CST11Q9H112 138 aa-2.86□□□□□ -2.87
SCARNA23-201ENST00000516060 PRTFDC1Q9NRG1 225 aa-2.86□□□□□ -2.87
SCARNA23-201ENST00000516060 UTP20O75691 2785 aaKnown RBP-2.86□□□□□ -2.87
SCARNA23-201ENST00000516060 CCDC168Q8NDH2 2452 aa-2.86□□□□□ -2.87
SCARNA23-201ENST00000516060 MGAM2Q2M2H8 2515 aa-2.87□□□□□ -2.87
SCARNA23-201ENST00000516060 PLXNA2O75051 1894 aa-2.87□□□□□ -2.87
SCARNA23-201ENST00000516060 A0A1B0GV50 99 aa-2.87□□□□□ -2.87
SCARNA23-201ENST00000516060 CCDC169A6NNP5 214 aa-2.87□□□□□ -2.87
SCARNA23-201ENST00000516060 SMIM10L2AP0DMW4 78 aa-2.87□□□□□ -2.87
SCARNA23-201ENST00000516060 SMIM10L2BP0DMW5 78 aa-2.87□□□□□ -2.87
SCARNA23-201ENST00000516060 PYYP10082 97 aa-2.87□□□□□ -2.87
SCARNA23-201ENST00000516060 SPRR1BP22528 89 aa-2.87□□□□□ -2.87
SCARNA23-201ENST00000516060 GCHFRP30047 84 aa-2.87□□□□□ -2.87
SCARNA23-201ENST00000516060 GLRXP35754 106 aa-2.87□□□□□ -2.87
SCARNA23-201ENST00000516060 RAB5BP61020 215 aa-2.87□□□□□ -2.87
SCARNA23-201ENST00000516060 KRR1Q13601 381 aaKnown RBP-2.87□□□□□ -2.87
SCARNA23-201ENST00000516060 DEFB135Q30KP9 77 aa-2.87□□□□□ -2.87
SCARNA23-201ENST00000516060 CHCHD1Q96BP2 118 aaKnown RBP-2.87□□□□□ -2.87
SCARNA23-201ENST00000516060 UPF3BQ9BZI7 483 aaKnown RBP-2.87□□□□□ -2.87
SCARNA23-201ENST00000516060 ELOF1P60002 83 aaKnown RBP-2.88□□□□□ -2.87
SCARNA23-201ENST00000516060 HAMPP81172 84 aa-2.88□□□□□ -2.87
SCARNA23-201ENST00000516060 MYL5Q02045 173 aa-2.88□□□□□ -2.87
SCARNA23-201ENST00000516060 DIAPH2-AS1Q14236 149 aa-2.88□□□□□ -2.87
SCARNA23-201ENST00000516060 ZNHIT3Q15649 155 aaPredicted RBP-2.88□□□□□ -2.87
SCARNA23-201ENST00000516060 SPOPLQ6IQ16 392 aa-2.88□□□□□ -2.87
SCARNA23-201ENST00000516060 LRRN1Q6UXK5 716 aa-2.88□□□□□ -2.87
SCARNA23-201ENST00000516060 FAM172AQ8WUF8 416 aa-2.88□□□□□ -2.87
SCARNA23-201ENST00000516060 COA4Q9NYJ1 87 aa-2.88□□□□□ -2.87
SCARNA23-201ENST00000516060 SIPA1L3O60292 1781 aaPredicted RBP-2.88□□□□□ -2.87
SCARNA23-201ENST00000516060 KIF27Q86VH2 1401 aa-2.88□□□□□ -2.87
SCARNA23-201ENST00000516060 NUP155O75694 1391 aa-2.88□□□□□ -2.87
SCARNA23-201ENST00000516060 GCN1Q92616 2671 aaKnown RBP-2.89□□□□□ -2.87
SCARNA23-201ENST00000516060 FTCDNL1E5RQL4 147 aa-2.89□□□□□ -2.87
SCARNA23-201ENST00000516060 M0R036 132 aa-2.89□□□□□ -2.87
SCARNA23-201ENST00000516060 SRP14P37108 136 aaKnown RBP-2.89□□□□□ -2.87
SCARNA23-201ENST00000516060 DEFB112Q30KQ8 113 aa-2.89□□□□□ -2.87
SCARNA23-201ENST00000516060 COMMD7Q86VX2 200 aa-2.89□□□□□ -2.87
SCARNA23-201ENST00000516060 LINC00269Q8N2A0 174 aa-2.89□□□□□ -2.87
SCARNA23-201ENST00000516060 SLC25A40Q8TBP6 338 aa-2.89□□□□□ -2.87
SCARNA23-201ENST00000516060 STAG3L4Q8TBR4 150 aa-2.89□□□□□ -2.87
SCARNA23-201ENST00000516060 SPCS1Q9Y6A9 102 aa-2.89□□□□□ -2.87
SCARNA23-201ENST00000516060 ZCCHC6Q5VYS8 1495 aaKnown RBP-2.9□□□□□ -2.87
SCARNA23-201ENST00000516060 FXYD6-FXYD2A0A087WZ82 144 aa-2.9□□□□□ -2.87
SCARNA23-201ENST00000516060 FAM159BA6NKW6 160 aa-2.9□□□□□ -2.87
SCARNA23-201ENST00000516060 UCHL3P15374 230 aa-2.9□□□□□ -2.87
SCARNA23-201ENST00000516060 RPS20P60866 119 aaKnown RBP-2.9□□□□□ -2.87
SCARNA23-201ENST00000516060 SNRPD2P62316 118 aaKnown RBP-2.9□□□□□ -2.87
SCARNA23-201ENST00000516060 RANP62826 216 aaKnown RBP-2.9□□□□□ -2.87
SCARNA23-201ENST00000516060 AESQ08117 197 aa-2.9□□□□□ -2.87
SCARNA23-201ENST00000516060 ALKAL1Q6UXT8 129 aa-2.9□□□□□ -2.87
SCARNA23-201ENST00000516060 YPEL2Q96QA6 119 aa-2.9□□□□□ -2.87
SCARNA23-201ENST00000516060 CEP295Q9C0D2 2601 aa-2.91□□□□□ -2.88
SCARNA23-201ENST00000516060 TRAV12-2A0A075B6T6 113 aa-2.91□□□□□ -2.88
SCARNA23-201ENST00000516060 IFITM5A6NNB3 132 aa-2.91□□□□□ -2.88
SCARNA23-201ENST00000516060 EVPLLA8MZ36 301 aa-2.91□□□□□ -2.88
SCARNA23-201ENST00000516060 AP3S2P59780 193 aa-2.91□□□□□ -2.88
SCARNA23-201ENST00000516060 SLAMF1Q13291 335 aa-2.91□□□□□ -2.88
SCARNA23-201ENST00000516060 PMAIP1Q13794 54 aa-2.91□□□□□ -2.88
SCARNA23-201ENST00000516060 INSL4Q14641 139 aa-2.91□□□□□ -2.88
SCARNA23-201ENST00000516060 C3orf62Q6ZUJ4 267 aa-2.91□□□□□ -2.88
SCARNA23-201ENST00000516060 PIGXQ8TBF5 258 aa-2.91□□□□□ -2.88
SCARNA23-201ENST00000516060 TMEM141Q96I45 108 aa-2.91□□□□□ -2.88
SCARNA23-201ENST00000516060 CASZ1Q86V15 1759 aa-2.92□□□□□ -2.88
SCARNA23-201ENST00000516060 LOC107984640A0A0U1RRK4 108 aa-2.92□□□□□ -2.88
Retrieved 100 of 20,778 RNA–protein pairs in 78.2 ms