RNA–Protein interactions for RNA: ENST00000515918.1

RNU6-488P-201, Transcript of RNA, U6 small nuclear 488, pseudogene, humanhuman

BASIC

Gene RNU6-488P, Length 99 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-488P-201ENST00000515918 ZNF563Q8TA94 476 aa1.72□□□□□ -2.13
RNU6-488P-201ENST00000515918 CLEC2BQ92478 149 aa1.72□□□□□ -2.13
RNU6-488P-201ENST00000515918 PSMF1Q92530 271 aa1.72□□□□□ -2.13
RNU6-488P-201ENST00000515918 TNS3Q68CZ2 1445 aa1.72□□□□□ -2.13
RNU6-488P-201ENST00000515918 RFX7Q2KHR2 1363 aa1.72□□□□□ -2.13
RNU6-488P-201ENST00000515918 ANAPC1Q9H1A4 1944 aa1.72□□□□□ -2.13
RNU6-488P-201ENST00000515918 RTTNQ86VV8 2226 aa1.71□□□□□ -2.14
RNU6-488P-201ENST00000515918 RP1P56715 2156 aa1.71□□□□□ -2.14
RNU6-488P-201ENST00000515918 CCDC160A6NGH7 325 aa1.71□□□□□ -2.14
RNU6-488P-201ENST00000515918 ZNF736B4DX44 427 aaPredicted RBP1.71□□□□□ -2.14
RNU6-488P-201ENST00000515918 ERC2-IT1O76042 136 aa1.71□□□□□ -2.14
RNU6-488P-201ENST00000515918 SRP9P49458 86 aaKnown RBP1.71□□□□□ -2.14
RNU6-488P-201ENST00000515918 DEFB115Q30KQ5 88 aa1.71□□□□□ -2.14
RNU6-488P-201ENST00000515918 OR4C12Q96R67 309 aa1.71□□□□□ -2.14
RNU6-488P-201ENST00000515918 TP53RKQ96S44 253 aa1.71□□□□□ -2.14
RNU6-488P-201ENST00000515918 FKBP11Q9NYL4 201 aa1.71□□□□□ -2.14
RNU6-488P-201ENST00000515918 TPRKBQ9Y3C4 175 aa1.71□□□□□ -2.14
RNU6-488P-201ENST00000515918 HEATR5BQ9P2D3 2071 aa1.71□□□□□ -2.14
RNU6-488P-201ENST00000515918 HYPMO75409 117 aa1.7□□□□□ -2.14
RNU6-488P-201ENST00000515918 TCRAP04437 139 aa1.7□□□□□ -2.14
RNU6-488P-201ENST00000515918 PAEPP09466 180 aa1.7□□□□□ -2.14
RNU6-488P-201ENST00000515918 TMEM244Q5VVB8 128 aa1.7□□□□□ -2.14
RNU6-488P-201ENST00000515918 C2orf82Q6UX34 121 aa1.7□□□□□ -2.14
RNU6-488P-201ENST00000515918 LINC00269Q8N2A0 174 aa1.7□□□□□ -2.14
RNU6-488P-201ENST00000515918 PATE1Q8WXA2 126 aa1.7□□□□□ -2.14
RNU6-488P-201ENST00000515918 FAM107BQ9H098 131 aa1.7□□□□□ -2.14
RNU6-488P-201ENST00000515918 FER1L6Q2WGJ9 1857 aa1.69□□□□□ -2.14
RNU6-488P-201ENST00000515918 C5orf58C9J3I9 102 aa1.69□□□□□ -2.14
RNU6-488P-201ENST00000515918 HCRTO43612 131 aa1.69□□□□□ -2.14
RNU6-488P-201ENST00000515918 SLC25A5P05141 298 aaKnown RBP1.69□□□□□ -2.14
RNU6-488P-201ENST00000515918 CXCL8P10145 99 aa1.69□□□□□ -2.14
RNU6-488P-201ENST00000515918 TPT1P13693 172 aaKnown RBP1.69□□□□□ -2.14
RNU6-488P-201ENST00000515918 HIST1H1AQ02539 215 aaPredicted RBP1.69□□□□□ -2.14
RNU6-488P-201ENST00000515918 TEX261Q6UWH6 196 aa1.69□□□□□ -2.14
RNU6-488P-201ENST00000515918 FAM19A2Q8N3H0 131 aa1.69□□□□□ -2.14
RNU6-488P-201ENST00000515918 OR8J3Q8NGG0 315 aa1.69□□□□□ -2.14
RNU6-488P-201ENST00000515918 U3KQ87 197 aa1.69□□□□□ -2.14
RNU6-488P-201ENST00000515918 PCNX2A6NKB5 2137 aa1.69□□□□□ -2.14
RNU6-488P-201ENST00000515918 COL24A1Q17RW2 1714 aa1.69□□□□□ -2.14
RNU6-488P-201ENST00000515918 KDM6AO15550 1401 aaPredicted RBP1.68□□□□□ -2.14
RNU6-488P-201ENST00000515918 CCL16O15467 120 aa1.68□□□□□ -2.14
RNU6-488P-201ENST00000515918 HBDP02042 147 aa1.68□□□□□ -2.14
RNU6-488P-201ENST00000515918 HSD17B12Q53GQ0 312 aa1.68□□□□□ -2.14
RNU6-488P-201ENST00000515918 OR5AS1Q8N127 324 aa1.68□□□□□ -2.14
RNU6-488P-201ENST00000515918 NABP2Q9BQ15 211 aa1.68□□□□□ -2.14
RNU6-488P-201ENST00000515918 NAA38Q9BRA0 125 aaKnown RBP1.68□□□□□ -2.14
RNU6-488P-201ENST00000515918 KLK9Q9UKQ9 250 aa1.68□□□□□ -2.14
RNU6-488P-201ENST00000515918 MGAMO43451 1857 aa1.68□□□□□ -2.14
RNU6-488P-201ENST00000515918 MYH10P35580 1976 aa1.68□□□□□ -2.14
RNU6-488P-201ENST00000515918 FREM1Q5H8C1 2179 aa1.68□□□□□ -2.14
RNU6-488P-201ENST00000515918 LAMB4A4D0S4 1761 aa1.67□□□□□ -2.14
RNU6-488P-201ENST00000515918 TRAV16A0A0A6YYK6 109 aaPredicted RBP1.67□□□□□ -2.14
RNU6-488P-201ENST00000515918 UQCRQO14949 82 aa1.67□□□□□ -2.14
RNU6-488P-201ENST00000515918 SAA1P0DJI8 122 aaPredicted RBP1.67□□□□□ -2.14
RNU6-488P-201ENST00000515918 MPC1LP0DKB6 136 aa1.67□□□□□ -2.14
RNU6-488P-201ENST00000515918 SLC25A4P12235 298 aa1.67□□□□□ -2.14
RNU6-488P-201ENST00000515918 CCL4P13236 92 aa1.67□□□□□ -2.14
RNU6-488P-201ENST00000515918 CIRBPQ14011 172 aaKnown RBP1.67□□□□□ -2.14
RNU6-488P-201ENST00000515918 ZCCHC23Q6ZST2 131 aa1.67□□□□□ -2.14
RNU6-488P-201ENST00000515918 C4orf3Q8WVX3 66 aa1.67□□□□□ -2.14
RNU6-488P-201ENST00000515918 LINC00052Q96N35 136 aa1.67□□□□□ -2.14
RNU6-488P-201ENST00000515918 BANF2Q9H503 90 aa1.67□□□□□ -2.14
RNU6-488P-201ENST00000515918 CDC42SE1Q9NRR8 79 aa1.67□□□□□ -2.14
RNU6-488P-201ENST00000515918 MED9Q9NWA0 146 aa1.67□□□□□ -2.14
RNU6-488P-201ENST00000515918 COL11A1P12107 1806 aaPredicted RBP1.67□□□□□ -2.14
RNU6-488P-201ENST00000515918 DIDO1Q9BTC0 2240 aaKnown RBP1.66□□□□□ -2.14
RNU6-488P-201ENST00000515918 ZNF727A8MUV8 499 aa1.66□□□□□ -2.14
RNU6-488P-201ENST00000515918 TRACP01848 142 aa1.66□□□□□ -2.14
RNU6-488P-201ENST00000515918 BLCAPP62952 87 aa1.66□□□□□ -2.14
RNU6-488P-201ENST00000515918 QRFPP83859 136 aa1.66□□□□□ -2.14
RNU6-488P-201ENST00000515918 DIAPH2-AS1Q14236 149 aa1.66□□□□□ -2.14
RNU6-488P-201ENST00000515918 HAGHLQ6PII5 290 aaPredicted RBP1.66□□□□□ -2.14
RNU6-488P-201ENST00000515918 UNQ6190/PRO20217Q6UXQ8 127 aa1.66□□□□□ -2.14
RNU6-488P-201ENST00000515918 FOXI2Q6ZQN5 318 aa1.66□□□□□ -2.14
RNU6-488P-201ENST00000515918 TCEAL4Q96EI5 215 aa1.66□□□□□ -2.14
RNU6-488P-201ENST00000515918 AP1S3Q96PC3 154 aa1.66□□□□□ -2.14
RNU6-488P-201ENST00000515918 CALML5Q9NZT1 146 aa1.66□□□□□ -2.14
RNU6-488P-201ENST00000515918 COPZ2Q9P299 210 aa1.66□□□□□ -2.14
RNU6-488P-201ENST00000515918 COL1A1P02452 1464 aaPredicted RBP1.66□□□□□ -2.14
RNU6-488P-201ENST00000515918 BICRAQ9NZM4 1560 aa1.65□□□□□ -2.15
RNU6-488P-201ENST00000515918 LOC107986453A0A1B0GWG9 222 aa1.65□□□□□ -2.15
RNU6-488P-201ENST00000515918 TRBV6-4A0A1B0GX49 114 aa1.65□□□□□ -2.15
RNU6-488P-201ENST00000515918 NDUFA2O43678 99 aa1.65□□□□□ -2.15
RNU6-488P-201ENST00000515918 GLYATL3Q5SZD4 288 aa1.65□□□□□ -2.15
RNU6-488P-201ENST00000515918 GKN2Q86XP6 184 aa1.65□□□□□ -2.15
RNU6-488P-201ENST00000515918 OR4S1Q8NGB4 309 aa1.65□□□□□ -2.15
RNU6-488P-201ENST00000515918 OR5AK2Q8NH90 309 aa1.65□□□□□ -2.15
RNU6-488P-201ENST00000515918 SMIM3Q9BZL3 60 aa1.65□□□□□ -2.15
RNU6-488P-201ENST00000515918 CST11Q9H112 138 aa1.65□□□□□ -2.15
RNU6-488P-201ENST00000515918 CYSTM1Q9H1C7 97 aa1.65□□□□□ -2.15
RNU6-488P-201ENST00000515918 ORMDL1Q9P0S3 153 aa1.65□□□□□ -2.15
RNU6-488P-201ENST00000515918 LAMB2P55268 1798 aa1.64□□□□□ -2.15
RNU6-488P-201ENST00000515918 COL4A1P02462 1669 aa1.64□□□□□ -2.15
RNU6-488P-201ENST00000515918 SYNJ1O43426 1573 aa1.64□□□□□ -2.15
RNU6-488P-201ENST00000515918 KDM5CP41229 1560 aa1.64□□□□□ -2.15
RNU6-488P-201ENST00000515918 J3QKU1 62 aa1.64□□□□□ -2.15
RNU6-488P-201ENST00000515918 CD14P08571 375 aa1.64□□□□□ -2.15
RNU6-488P-201ENST00000515918 SNRPD3P62318 126 aaKnown RBP1.64□□□□□ -2.15
RNU6-488P-201ENST00000515918 MIR22HGQ0VDD5 57 aa1.64□□□□□ -2.15
RNU6-488P-201ENST00000515918 SPRNQ5BIV9 151 aa1.64□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms