RNA–Protein interactions for RNA: ENST00000513148.1

HMGCL-209, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

TSL 2

Gene HMGCL, Length 2,011 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-209ENST00000513148 RAX2Q96IS3 184 aa12.74□□□□□ -0.37
HMGCL-209ENST00000513148 SLC25A22Q9H936 323 aa12.74□□□□□ -0.37
HMGCL-209ENST00000513148 NRN1Q9NPD7 142 aa12.74□□□□□ -0.37
HMGCL-209ENST00000513148 PKD1L1Q8TDX9 2849 aa12.74□□□□□ -0.37
HMGCL-209ENST00000513148 A0A0G2JLM5 398 aa12.73□□□□□ -0.37
HMGCL-209ENST00000513148 C15orf32Q32M92 178 aa12.73□□□□□ -0.37
HMGCL-209ENST00000513148 SMIM12Q96EX1 92 aa12.73□□□□□ -0.37
HMGCL-209ENST00000513148 F11RQ9Y624 299 aaKnown RBP12.73□□□□□ -0.37
HMGCL-209ENST00000513148 WNK1Q9H4A3 2382 aa12.73□□□□□ -0.37
HMGCL-209ENST00000513148 UBE2L5PA0A1B0GUS4 154 aa12.72□□□□□ -0.37
HMGCL-209ENST00000513148 FAM223BA6NKX1 122 aa12.72□□□□□ -0.37
HMGCL-209ENST00000513148 BRI3O95415 125 aa12.72□□□□□ -0.37
HMGCL-209ENST00000513148 IGHV3-23P01764 117 aa12.72□□□□□ -0.37
HMGCL-209ENST00000513148 LGALS1P09382 135 aaKnown RBP12.72□□□□□ -0.37
HMGCL-209ENST00000513148 MFAP2P55001 183 aa12.72□□□□□ -0.37
HMGCL-209ENST00000513148 RHOBP62745 196 aa12.72□□□□□ -0.37
HMGCL-209ENST00000513148 ERHP84090 104 aaKnown RBP12.72□□□□□ -0.37
HMGCL-209ENST00000513148 ZNF90Q03938 601 aa12.72□□□□□ -0.37
HMGCL-209ENST00000513148 FAM223AQ8IWN6 122 aa12.72□□□□□ -0.37
HMGCL-209ENST00000513148 OR11H1Q8NG94 326 aa12.72□□□□□ -0.37
HMGCL-209ENST00000513148 KCNS1Q96KK3 526 aa12.72□□□□□ -0.37
HMGCL-209ENST00000513148 IGLV11-55A0A075B6I3 123 aa12.72□□□□□ -0.37
HMGCL-209ENST00000513148 IAPPP10997 89 aa12.72□□□□□ -0.37
HMGCL-209ENST00000513148 KRTDAPP60985 99 aa12.72□□□□□ -0.37
HMGCL-209ENST00000513148 ATP5G2Q06055 141 aa12.72□□□□□ -0.37
HMGCL-209ENST00000513148 RNF151Q2KHN1 245 aa12.72□□□□□ -0.37
HMGCL-209ENST00000513148 OCIAD2Q56VL3 154 aa12.72□□□□□ -0.37
HMGCL-209ENST00000513148 PRR31Q5SQ13 230 aa12.72□□□□□ -0.37
HMGCL-209ENST00000513148 OR52E5Q8NH55 327 aa12.72□□□□□ -0.37
HMGCL-209ENST00000513148 USMG5Q96IX5 58 aa12.72□□□□□ -0.37
HMGCL-209ENST00000513148 CCL24O00175 119 aa12.71□□□□□ -0.37
HMGCL-209ENST00000513148 SPANXN5Q5MJ07 72 aa12.71□□□□□ -0.37
HMGCL-209ENST00000513148 GATAD1Q8WUU5 269 aa12.71□□□□□ -0.37
HMGCL-209ENST00000513148 IGHV3-21A0A0B4J1V1 117 aa12.71□□□□□ -0.38
HMGCL-209ENST00000513148 NDUFB4O95168 129 aa12.71□□□□□ -0.38
HMGCL-209ENST00000513148 CDC34P49427 236 aaPredicted RBP12.71□□□□□ -0.38
HMGCL-209ENST00000513148 TREML4Q6UXN2 200 aa12.71□□□□□ -0.38
HMGCL-209ENST00000513148 VPS25Q9BRG1 176 aa12.71□□□□□ -0.38
HMGCL-209ENST00000513148 CST9LQ9H4G1 147 aa12.71□□□□□ -0.38
HMGCL-209ENST00000513148 HEYLQ9NQ87 328 aaPredicted RBP12.71□□□□□ -0.38
HMGCL-209ENST00000513148 C9JCJ5 164 aa12.7□□□□□ -0.38
HMGCL-209ENST00000513148 ZNF324O75467 553 aaPredicted RBP12.7□□□□□ -0.38
HMGCL-209ENST00000513148 CBLN1P23435 193 aa12.7□□□□□ -0.38
HMGCL-209ENST00000513148 OR1N2Q8NGR9 330 aa12.7□□□□□ -0.38
HMGCL-209ENST00000513148 IGHV4OR15-8A0A075B7B6 117 aa12.69□□□□□ -0.38
HMGCL-209ENST00000513148 A0A087WW49 117 aa12.69□□□□□ -0.38
HMGCL-209ENST00000513148 PMS2P5A8MQ11 134 aa12.69□□□□□ -0.38
HMGCL-209ENST00000513148 K7ERU9 68 aa12.69□□□□□ -0.38
HMGCL-209ENST00000513148 TRBV12-3P01733 135 aa12.69□□□□□ -0.38
HMGCL-209ENST00000513148 OR10J4P0C629 311 aa12.69□□□□□ -0.38
HMGCL-209ENST00000513148 PDLIM3Q53GG5 364 aaPredicted RBP12.69□□□□□ -0.38
HMGCL-209ENST00000513148 OR10P1Q8NGE3 313 aa12.69□□□□□ -0.38
HMGCL-209ENST00000513148 NPCDR1Q9BY65 106 aa12.69□□□□□ -0.38
HMGCL-209ENST00000513148 THYN1Q9P016 225 aa12.69□□□□□ -0.38
HMGCL-209ENST00000513148 A0A1W2PS18 150 aa12.69□□□□□ -0.38
HMGCL-209ENST00000513148 CBY3A6NI87 242 aa12.69□□□□□ -0.38
HMGCL-209ENST00000513148 AMTP48728 403 aa12.69□□□□□ -0.38
HMGCL-209ENST00000513148 ZNF114Q8NC26 417 aa12.69□□□□□ -0.38
HMGCL-209ENST00000513148 DPF1Q92782 380 aa12.69□□□□□ -0.38
HMGCL-209ENST00000513148 UHRF2Q96PU4 802 aa12.69□□□□□ -0.38
HMGCL-209ENST00000513148 TRAV9-2A0A087WT02 112 aa12.68□□□□□ -0.38
HMGCL-209ENST00000513148 TMEM238C9JI98 176 aa12.68□□□□□ -0.38
HMGCL-209ENST00000513148 INS-IGF2F8WCM5 200 aa12.68□□□□□ -0.38
HMGCL-209ENST00000513148 MYCNOSP40205 109 aa12.68□□□□□ -0.38
HMGCL-209ENST00000513148 LINC01619G3V211 115 aa12.67□□□□□ -0.38
HMGCL-209ENST00000513148 C3orf79P0CE67 100 aa12.67□□□□□ -0.38
HMGCL-209ENST00000513148 RNASE2P10153 161 aaKnown RBP12.67□□□□□ -0.38
HMGCL-209ENST00000513148 HINT1P49773 126 aaPredicted RBP12.67□□□□□ -0.38
HMGCL-209ENST00000513148 SLURP1P55000 103 aa12.67□□□□□ -0.38
HMGCL-209ENST00000513148 RPEL1Q2QD12 228 aa12.67□□□□□ -0.38
HMGCL-209ENST00000513148 EEF1AKMT3Q96AZ1 226 aa12.67□□□□□ -0.38
HMGCL-209ENST00000513148 CCDC140Q96MF4 163 aa12.67□□□□□ -0.38
HMGCL-209ENST00000513148 PEF1Q9UBV8 284 aaKnown RBP12.67□□□□□ -0.38
HMGCL-209ENST00000513148 MPDU1O75352 247 aa12.67□□□□□ -0.38
HMGCL-209ENST00000513148 IGHV3-48P01763 117 aa12.67□□□□□ -0.38
HMGCL-209ENST00000513148 SUB1P53999 127 aaKnown RBP eCLIP12.67□□□□□ -0.38
HMGCL-209ENST00000513148 FHL3Q13643 280 aa12.67□□□□□ -0.38
HMGCL-209ENST00000513148 KLK9Q2XQG4 91 aa12.67□□□□□ -0.38
HMGCL-209ENST00000513148 CLEC19AQ6UXS0 136 aa12.67□□□□□ -0.38
HMGCL-209ENST00000513148 TCF24Q7RTU0 167 aa12.67□□□□□ -0.38
HMGCL-209ENST00000513148 LINC00482Q8N8I6 264 aa12.67□□□□□ -0.38
HMGCL-209ENST00000513148 OCC1Q8TAD7 63 aa12.67□□□□□ -0.38
HMGCL-209ENST00000513148 C11orf52Q96A22 123 aa12.67□□□□□ -0.38
HMGCL-209ENST00000513148 NUDT11Q96G61 164 aa12.67□□□□□ -0.38
HMGCL-209ENST00000513148 KLK9Q9UKQ9 250 aa12.67□□□□□ -0.38
HMGCL-209ENST00000513148 TRBV20OR9-2A0A075B6H5 130 aa12.66□□□□□ -0.38
HMGCL-209ENST00000513148 TMEM238LA0A1B0GVL6 79 aa12.66□□□□□ -0.38
HMGCL-209ENST00000513148 SNURFLB1AK76 121 aa12.66□□□□□ -0.38
HMGCL-209ENST00000513148 NIT1Q86X76 327 aa12.66□□□□□ -0.38
HMGCL-209ENST00000513148 BORCS7Q96B45 105 aa12.66□□□□□ -0.38
HMGCL-209ENST00000513148 K7EIM0 57 aa12.66□□□□□ -0.38
HMGCL-209ENST00000513148 HMGB3O15347 200 aaKnown RBP12.66□□□□□ -0.38
HMGCL-209ENST00000513148 MT-CO2P00403 227 aa12.66□□□□□ -0.38
HMGCL-209ENST00000513148 NBEAP1P0C6P0 100 aa12.66□□□□□ -0.38
HMGCL-209ENST00000513148 VAMP3Q15836 100 aa12.66□□□□□ -0.38
HMGCL-209ENST00000513148 ARL2-SNX15V9GYD0 113 aa12.66□□□□□ -0.38
HMGCL-209ENST00000513148 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP12.65□□□□□ -0.38
HMGCL-209ENST00000513148 HLA-DQA1P01909 254 aa12.65□□□□□ -0.38
HMGCL-209ENST00000513148 HOXD3P31249 432 aaPredicted RBP12.65□□□□□ -0.38
HMGCL-209ENST00000513148 GPR183P32249 361 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms