RNA–Protein interactions for RNA: ENST00000512229.6

PCDHA4-202, Transcript of protocadherin alpha 4, humanhuman

TSL 1 (best) BASIC

Gene PCDHA4, Length 4,163 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA4-202ENST00000512229 RITA1Q96K30 269 aa10.4□□□□□ -0.75
PCDHA4-202ENST00000512229 ZFYVE26Q68DK2 2539 aa10.4□□□□□ -0.75
PCDHA4-202ENST00000512229 IGHV4-30-2A0A087WSY4 118 aa10.39□□□□□ -0.75
PCDHA4-202ENST00000512229 FCN3O75636 299 aa10.39□□□□□ -0.75
PCDHA4-202ENST00000512229 SYNJ2BPP57105 145 aa10.39□□□□□ -0.75
PCDHA4-202ENST00000512229 JOSD1Q15040 202 aaPredicted RBP10.39□□□□□ -0.75
PCDHA4-202ENST00000512229 C12orf54Q6X4T0 127 aa10.39□□□□□ -0.75
PCDHA4-202ENST00000512229 TTC9CQ8N5M4 171 aa10.39□□□□□ -0.75
PCDHA4-202ENST00000512229 OR1N2Q8NGR9 330 aa10.39□□□□□ -0.75
PCDHA4-202ENST00000512229 GSN-AS1Q9NRJ2 163 aa10.39□□□□□ -0.75
PCDHA4-202ENST00000512229 TNFRSF18Q9Y5U5 241 aa10.39□□□□□ -0.75
PCDHA4-202ENST00000512229 SH2D1AO60880 128 aa10.39□□□□□ -0.75
PCDHA4-202ENST00000512229 CACNG7P62955 275 aa10.39□□□□□ -0.75
PCDHA4-202ENST00000512229 NIT1Q86X76 327 aa10.39□□□□□ -0.75
PCDHA4-202ENST00000512229 C11orf52Q96A22 123 aa10.39□□□□□ -0.75
PCDHA4-202ENST00000512229 ARHGAP21Q5T5U3 1957 aa10.39□□□□□ -0.75
PCDHA4-202ENST00000512229 C1orf194Q5T5A4 169 aa10.39□□□□□ -0.75
PCDHA4-202ENST00000512229 KLHL30-AS1Q8NEE0 82 aa10.39□□□□□ -0.75
PCDHA4-202ENST00000512229 PRORYQ9H606 182 aa10.39□□□□□ -0.75
PCDHA4-202ENST00000512229 VPS13AQ96RL7 3174 aa10.38□□□□□ -0.75
PCDHA4-202ENST00000512229 HINT1P49773 126 aaPredicted RBP10.38□□□□□ -0.75
PCDHA4-202ENST00000512229 ACTL10Q5JWF8 245 aa10.38□□□□□ -0.75
PCDHA4-202ENST00000512229 TMEM256Q8N2U0 113 aa10.38□□□□□ -0.75
PCDHA4-202ENST00000512229 NXT2Q9NPJ8 142 aaKnown RBP10.38□□□□□ -0.75
PCDHA4-202ENST00000512229 TMEM14CQ9P0S9 112 aa10.38□□□□□ -0.75
PCDHA4-202ENST00000512229 RPLP1P05386 114 aaKnown RBP10.38□□□□□ -0.75
PCDHA4-202ENST00000512229 ZNF25P17030 456 aaPredicted RBP10.38□□□□□ -0.75
PCDHA4-202ENST00000512229 SSBP2P81877 361 aaPredicted RBP10.38□□□□□ -0.75
PCDHA4-202ENST00000512229 ZNF114Q8NC26 417 aa10.38□□□□□ -0.75
PCDHA4-202ENST00000512229 FXYD5Q96DB9 178 aa10.38□□□□□ -0.75
PCDHA4-202ENST00000512229 C10orf105Q8TEF2 133 aa10.38□□□□□ -0.75
PCDHA4-202ENST00000512229 LBHQ53QV2 105 aaPredicted RBP10.37□□□□□ -0.75
PCDHA4-202ENST00000512229 SCGB3A1Q96QR1 104 aa10.37□□□□□ -0.75
PCDHA4-202ENST00000512229 LINC00574Q9H8X3 128 aa10.37□□□□□ -0.75
PCDHA4-202ENST00000512229 TMEM160Q9NX00 188 aa10.37□□□□□ -0.75
PCDHA4-202ENST00000512229 H3BRN7 92 aa10.37□□□□□ -0.75
PCDHA4-202ENST00000512229 C14orf144Q96I85 54 aa10.37□□□□□ -0.75
PCDHA4-202ENST00000512229 J3QR89 54 aa10.37□□□□□ -0.75
PCDHA4-202ENST00000512229 ZFP36P26651 326 aaKnown RBP10.37□□□□□ -0.75
PCDHA4-202ENST00000512229 PRR31Q5SQ13 230 aa10.37□□□□□ -0.75
PCDHA4-202ENST00000512229 Q8N7P7 452 aa10.37□□□□□ -0.75
PCDHA4-202ENST00000512229 BRWD1-AS2P59051 145 aa10.36□□□□□ -0.75
PCDHA4-202ENST00000512229 ST6GALNAC6Q969X2 333 aa10.36□□□□□ -0.75
PCDHA4-202ENST00000512229 ZNF256Q9Y2P7 627 aaPredicted RBP10.36□□□□□ -0.75
PCDHA4-202ENST00000512229 LRRK2Q5S007 2527 aa10.36□□□□□ -0.75
PCDHA4-202ENST00000512229 NPBQ8NG41 125 aa10.36□□□□□ -0.75
PCDHA4-202ENST00000512229 IGHV7-81A0A0B4J1V7 117 aa10.36□□□□□ -0.75
PCDHA4-202ENST00000512229 UBE2L6O14933 153 aa10.36□□□□□ -0.75
PCDHA4-202ENST00000512229 HBDP02042 147 aa10.36□□□□□ -0.75
PCDHA4-202ENST00000512229 ERCC8Q13216 396 aa10.36□□□□□ -0.75
PCDHA4-202ENST00000512229 NSUN5P1Q3KNT7 163 aa10.36□□□□□ -0.75
PCDHA4-202ENST00000512229 C11orf1Q9H5F2 150 aa10.36□□□□□ -0.75
PCDHA4-202ENST00000512229 P0C879 139 aa10.36□□□□□ -0.75
PCDHA4-202ENST00000512229 RNF182Q8N6D2 247 aa10.36□□□□□ -0.75
PCDHA4-202ENST00000512229 CHCHD1Q96BP2 118 aaKnown RBP10.36□□□□□ -0.75
PCDHA4-202ENST00000512229 NDUFA4O00483 81 aa10.35□□□□□ -0.75
PCDHA4-202ENST00000512229 IGKV1-17P01599 117 aa10.35□□□□□ -0.75
PCDHA4-202ENST00000512229 TMEM75Q8N9X5 138 aa10.35□□□□□ -0.75
PCDHA4-202ENST00000512229 ZNF492Q9P255 531 aa10.35□□□□□ -0.75
PCDHA4-202ENST00000512229 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.35□□□□□ -0.75
PCDHA4-202ENST00000512229 UTF1Q5T230 341 aa10.35□□□□□ -0.75
PCDHA4-202ENST00000512229 NRGNQ92686 78 aa10.35□□□□□ -0.75
PCDHA4-202ENST00000512229 FAM181BA6NEQ2 426 aa10.35□□□□□ -0.75
PCDHA4-202ENST00000512229 OR11H12B2RN74 326 aa10.35□□□□□ -0.75
PCDHA4-202ENST00000512229 D6R8Y8 96 aa10.35□□□□□ -0.75
PCDHA4-202ENST00000512229 K7EIM0 57 aa10.35□□□□□ -0.75
PCDHA4-202ENST00000512229 DEFB112Q30KQ8 113 aa10.35□□□□□ -0.75
PCDHA4-202ENST00000512229 OR11H1Q8NG94 326 aa10.35□□□□□ -0.75
PCDHA4-202ENST00000512229 OR11H2Q8NH07 326 aa10.35□□□□□ -0.75
PCDHA4-202ENST00000512229 FOXC2Q99958 501 aa10.35□□□□□ -0.75
PCDHA4-202ENST00000512229 TRAV12-3A0A0B4J271 114 aa10.34□□□□□ -0.75
PCDHA4-202ENST00000512229 FAM231BA6NCW3 169 aa10.34□□□□□ -0.75
PCDHA4-202ENST00000512229 E7EUB6 86 aa10.34□□□□□ -0.75
PCDHA4-202ENST00000512229 EVI2AP22794 236 aa10.34□□□□□ -0.75
PCDHA4-202ENST00000512229 ST20Q9HBF5 79 aa10.34□□□□□ -0.75
PCDHA4-202ENST00000512229 DNAH14Q0VDD8 3507 aa10.34□□□□□ -0.75
PCDHA4-202ENST00000512229 TRGV11A0A075B6L2 103 aa10.34□□□□□ -0.75
PCDHA4-202ENST00000512229 SAP30O75446 220 aa10.34□□□□□ -0.75
PCDHA4-202ENST00000512229 LYRM7Q5U5X0 104 aa10.34□□□□□ -0.75
PCDHA4-202ENST00000512229 FAM231DQ6ZW35 169 aa10.34□□□□□ -0.75
PCDHA4-202ENST00000512229 SPOCK3Q9BQ16 436 aa10.34□□□□□ -0.75
PCDHA4-202ENST00000512229 PMCHL2Q9BQD1 86 aa10.34□□□□□ -0.75
PCDHA4-202ENST00000512229 C2CD3Q4AC94 2353 aa10.34□□□□□ -0.75
PCDHA4-202ENST00000512229 TRGV2A0A075B6R0 118 aa10.34□□□□□ -0.75
PCDHA4-202ENST00000512229 NCR2O95944 276 aa10.34□□□□□ -0.75
PCDHA4-202ENST00000512229 IGLV2-23P01705 113 aa10.34□□□□□ -0.75
PCDHA4-202ENST00000512229 IGHV4-59P01825 116 aa10.34□□□□□ -0.75
PCDHA4-202ENST00000512229 IGHV4-38-2P0DP08 117 aa10.34□□□□□ -0.75
PCDHA4-202ENST00000512229 CTAG1AP78358 180 aa10.34□□□□□ -0.75
PCDHA4-202ENST00000512229 RNF151Q2KHN1 245 aa10.34□□□□□ -0.75
PCDHA4-202ENST00000512229 CT83Q5H943 113 aa10.34□□□□□ -0.75
PCDHA4-202ENST00000512229 WDFY4Q6ZS81 3184 aa10.34□□□□□ -0.75
PCDHA4-202ENST00000512229 SETD2Q9BYW2 2564 aaPredicted RBP10.34□□□□□ -0.75
PCDHA4-202ENST00000512229 I3L2K1 104 aa10.33□□□□□ -0.76
PCDHA4-202ENST00000512229 SRSF1Q07955 248 aaKnown RBP eCLIP10.33□□□□□ -0.76
PCDHA4-202ENST00000512229 Q8N9W7 124 aa10.33□□□□□ -0.76
PCDHA4-202ENST00000512229 GFRA4Q9GZZ7 299 aa10.33□□□□□ -0.76
PCDHA4-202ENST00000512229 EML5Q05BV3 1969 aa10.33□□□□□ -0.76
PCDHA4-202ENST00000512229 TRAV8-6A0A0B4J262 113 aa10.33□□□□□ -0.76
PCDHA4-202ENST00000512229 INS-IGF2F8WCM5 200 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms