RNA–Protein interactions for RNA: ENST00000511409.1

TRAPPC11-207, Transcript of trafficking protein particle complex 11, humanhuman

TSL 4

Gene TRAPPC11, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-207ENST00000511409 CCDC32Q9BV29 185 aa0.62□□□□□ -2.31
TRAPPC11-207ENST00000511409 RTL8AQ9BWD3 113 aa0.62□□□□□ -2.31
TRAPPC11-207ENST00000511409 CENPHQ9H3R5 247 aa0.62□□□□□ -2.31
TRAPPC11-207ENST00000511409 ATPIF1Q9UII2 106 aa0.62□□□□□ -2.31
TRAPPC11-207ENST00000511409 ASB4Q9Y574 426 aa0.62□□□□□ -2.31
TRAPPC11-207ENST00000511409 PHRF1Q9P1Y6 1649 aaKnown RBP0.62□□□□□ -2.31
TRAPPC11-207ENST00000511409 CD109Q6YHK3 1445 aa0.62□□□□□ -2.31
TRAPPC11-207ENST00000511409 FREM3P0C091 2139 aa0.61□□□□□ -2.31
TRAPPC11-207ENST00000511409 H3BQV1 296 aa0.61□□□□□ -2.31
TRAPPC11-207ENST00000511409 IFNA21P01568 189 aa0.61□□□□□ -2.31
TRAPPC11-207ENST00000511409 MT-ND6P03923 174 aa0.61□□□□□ -2.31
TRAPPC11-207ENST00000511409 RPL35P42766 123 aaKnown RBP0.61□□□□□ -2.31
TRAPPC11-207ENST00000511409 NDUFA6P56556 154 aa0.61□□□□□ -2.31
TRAPPC11-207ENST00000511409 VMA21Q3ZAQ7 101 aa0.61□□□□□ -2.31
TRAPPC11-207ENST00000511409 OR10AC1Q8NH08 325 aa0.61□□□□□ -2.31
TRAPPC11-207ENST00000511409 PLEKHB2Q96CS7 222 aa0.61□□□□□ -2.31
TRAPPC11-207ENST00000511409 OR2H1Q9GZK4 316 aa0.61□□□□□ -2.31
TRAPPC11-207ENST00000511409 HSPB8Q9UJY1 196 aa0.61□□□□□ -2.31
TRAPPC11-207ENST00000511409 LAMTOR2Q9Y2Q5 125 aa0.61□□□□□ -2.31
TRAPPC11-207ENST00000511409 NUBP2Q9Y5Y2 271 aa0.61□□□□□ -2.31
TRAPPC11-207ENST00000511409 CITO14578 2027 aa0.6□□□□□ -2.31
TRAPPC11-207ENST00000511409 EIF3AQ14152 1382 aaKnown RBP0.6□□□□□ -2.31
TRAPPC11-207ENST00000511409 RFX7Q2KHR2 1363 aa0.6□□□□□ -2.31
TRAPPC11-207ENST00000511409 MYH2Q9UKX2 1941 aa0.6□□□□□ -2.31
TRAPPC11-207ENST00000511409 A0A1B0GV72 72 aa0.6□□□□□ -2.31
TRAPPC11-207ENST00000511409 E7EQ34 232 aa0.6□□□□□ -2.31
TRAPPC11-207ENST00000511409 PGRMC1O00264 195 aaKnown RBP0.6□□□□□ -2.31
TRAPPC11-207ENST00000511409 LTC4SQ16873 150 aa0.6□□□□□ -2.31
TRAPPC11-207ENST00000511409 SMIM15Q7Z3B0 74 aa0.6□□□□□ -2.31
TRAPPC11-207ENST00000511409 BORCS8Q96FH0 119 aa0.6□□□□□ -2.31
TRAPPC11-207ENST00000511409 NAT8BQ9UHF3 227 aa0.6□□□□□ -2.31
TRAPPC11-207ENST00000511409 RNF11Q9Y3C5 154 aa0.6□□□□□ -2.31
TRAPPC11-207ENST00000511409 COL24A1Q17RW2 1714 aa0.6□□□□□ -2.31
TRAPPC11-207ENST00000511409 ZFC3H1O60293 1989 aaKnown RBP0.59□□□□□ -2.31
TRAPPC11-207ENST00000511409 NUPR2A6NF83 97 aa0.59□□□□□ -2.31
TRAPPC11-207ENST00000511409 CD14P08571 375 aa0.59□□□□□ -2.31
TRAPPC11-207ENST00000511409 S100GP29377 79 aa0.59□□□□□ -2.31
TRAPPC11-207ENST00000511409 MRPS36P82909 103 aaKnown RBP0.59□□□□□ -2.31
TRAPPC11-207ENST00000511409 DIAPH2-AS1Q14236 149 aa0.59□□□□□ -2.31
TRAPPC11-207ENST00000511409 PHF5AQ7RTV0 110 aaKnown RBP0.59□□□□□ -2.31
TRAPPC11-207ENST00000511409 GRPEL2Q8TAA5 225 aa0.59□□□□□ -2.31
TRAPPC11-207ENST00000511409 MRPL40Q9NQ50 206 aaKnown RBP0.59□□□□□ -2.31
TRAPPC11-207ENST00000511409 TPRKBQ9Y3C4 175 aa0.59□□□□□ -2.31
TRAPPC11-207ENST00000511409 TET1Q8NFU7 2136 aa0.59□□□□□ -2.32
TRAPPC11-207ENST00000511409 ROCK1Q13464 1354 aa0.58□□□□□ -2.32
TRAPPC11-207ENST00000511409 A0A1W2PRE2 83 aa0.58□□□□□ -2.32
TRAPPC11-207ENST00000511409 KPNA4O00629 521 aaPredicted RBP0.58□□□□□ -2.32
TRAPPC11-207ENST00000511409 FAM107AO95990 144 aa0.58□□□□□ -2.32
TRAPPC11-207ENST00000511409 BCL2P10415 239 aa0.58□□□□□ -2.32
TRAPPC11-207ENST00000511409 FABP2P12104 132 aa0.58□□□□□ -2.32
TRAPPC11-207ENST00000511409 TFAMQ00059 246 aaKnown RBP0.58□□□□□ -2.32
TRAPPC11-207ENST00000511409 DR1Q01658 176 aa0.58□□□□□ -2.32
TRAPPC11-207ENST00000511409 MIR22HGQ0VDD5 57 aa0.58□□□□□ -2.32
TRAPPC11-207ENST00000511409 TMEM128Q5BJH2 165 aa0.58□□□□□ -2.32
TRAPPC11-207ENST00000511409 TMEM78Q5T7P6 136 aa0.58□□□□□ -2.32
TRAPPC11-207ENST00000511409 SPATA8Q6RVD6 105 aa0.58□□□□□ -2.32
TRAPPC11-207ENST00000511409 GLIPR1L1Q6UWM5 242 aa0.58□□□□□ -2.32
TRAPPC11-207ENST00000511409 KRTAP19-3Q7Z4W3 81 aa0.58□□□□□ -2.32
TRAPPC11-207ENST00000511409 TMEM35BQ8NCS4 154 aa0.58□□□□□ -2.32
TRAPPC11-207ENST00000511409 OR9Q1Q8NGQ5 310 aa0.58□□□□□ -2.32
TRAPPC11-207ENST00000511409 LXNQ9BS40 222 aa0.58□□□□□ -2.32
TRAPPC11-207ENST00000511409 EFCAB11Q9BUY7 163 aa0.58□□□□□ -2.32
TRAPPC11-207ENST00000511409 CST11Q9H112 138 aa0.58□□□□□ -2.32
TRAPPC11-207ENST00000511409 OTORQ9NRC9 128 aa0.58□□□□□ -2.32
TRAPPC11-207ENST00000511409 BOKQ9UMX3 212 aaPredicted RBP0.58□□□□□ -2.32
TRAPPC11-207ENST00000511409 FANCMQ8IYD8 2048 aa0.58□□□□□ -2.32
TRAPPC11-207ENST00000511409 TENM3Q9P273 2699 aa0.58□□□□□ -2.32
TRAPPC11-207ENST00000511409 TRPM1Q7Z4N2 1603 aa0.57□□□□□ -2.32
TRAPPC11-207ENST00000511409 YTHDC2Q9H6S0 1430 aaKnown RBP0.57□□□□□ -2.32
TRAPPC11-207ENST00000511409 PIK3C2AO00443 1686 aa0.57□□□□□ -2.32
TRAPPC11-207ENST00000511409 C5orf58C9J3I9 102 aa0.57□□□□□ -2.32
TRAPPC11-207ENST00000511409 TSTD3H0UI37 97 aa0.57□□□□□ -2.32
TRAPPC11-207ENST00000511409 H0YJX3 145 aa0.57□□□□□ -2.32
TRAPPC11-207ENST00000511409 H3BMG7 143 aa0.57□□□□□ -2.32
TRAPPC11-207ENST00000511409 S100A11P31949 105 aa0.57□□□□□ -2.32
TRAPPC11-207ENST00000511409 SDC2P34741 201 aa0.57□□□□□ -2.32
TRAPPC11-207ENST00000511409 LSM3P62310 102 aaKnown RBP0.57□□□□□ -2.32
TRAPPC11-207ENST00000511409 OCIAD2Q56VL3 154 aa0.57□□□□□ -2.32
TRAPPC11-207ENST00000511409 FOXI2Q6ZQN5 318 aa0.57□□□□□ -2.32
TRAPPC11-207ENST00000511409 LINC00305Q7Z4B0 112 aa0.57□□□□□ -2.32
TRAPPC11-207ENST00000511409 ANGPTL5Q86XS5 388 aa0.57□□□□□ -2.32
TRAPPC11-207ENST00000511409 OR4B1Q8NGF8 309 aa0.57□□□□□ -2.32
TRAPPC11-207ENST00000511409 SKA2Q8WVK7 121 aaPredicted RBP0.57□□□□□ -2.32
TRAPPC11-207ENST00000511409 CARD19Q96LW7 228 aa0.57□□□□□ -2.32
TRAPPC11-207ENST00000511409 MCEEQ96PE7 176 aa0.57□□□□□ -2.32
TRAPPC11-207ENST00000511409 OR4C12Q96R67 309 aa0.57□□□□□ -2.32
TRAPPC11-207ENST00000511409 SPANXA1Q9NS26 97 aa0.57□□□□□ -2.32
TRAPPC11-207ENST00000511409 HSPB11Q9Y547 144 aa0.57□□□□□ -2.32
TRAPPC11-207ENST00000511409 MYH3P11055 1940 aa0.57□□□□□ -2.32
TRAPPC11-207ENST00000511409 NISCHQ9Y2I1 1504 aa0.57□□□□□ -2.32
TRAPPC11-207ENST00000511409 RTL9Q8NET4 1388 aa0.57□□□□□ -2.32
TRAPPC11-207ENST00000511409 ERBINQ96RT1 1412 aa0.56□□□□□ -2.32
TRAPPC11-207ENST00000511409 TRAV16A0A0A6YYK6 109 aaPredicted RBP0.56□□□□□ -2.32
TRAPPC11-207ENST00000511409 TRBV30A0A0K0K1B3 111 aa0.56□□□□□ -2.32
TRAPPC11-207ENST00000511409 GNG14A0A1W2PPG7 69 aa0.56□□□□□ -2.32
TRAPPC11-207ENST00000511409 ZNF727A8MUV8 499 aa0.56□□□□□ -2.32
TRAPPC11-207ENST00000511409 TPT1P13693 172 aaKnown RBP0.56□□□□□ -2.32
TRAPPC11-207ENST00000511409 FABP4P15090 132 aa0.56□□□□□ -2.32
TRAPPC11-207ENST00000511409 FXYD4P59646 89 aa0.56□□□□□ -2.32
TRAPPC11-207ENST00000511409 B2MP61769 119 aa0.56□□□□□ -2.32
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms