RNA–Protein interactions for RNA: ENST00000511313.5

POLR2J3-215, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 1 (best) BASIC

Gene POLR2J3, Length 4,630 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-215ENST00000511313 PAX4O43316 350 aa7.46□□□□□ -1.22
POLR2J3-215ENST00000511313 OR10C1Q96KK4 312 aa7.46□□□□□ -1.22
POLR2J3-215ENST00000511313 PLSCR3Q9NRY6 295 aa7.46□□□□□ -1.22
POLR2J3-215ENST00000511313 AURKAIP1Q9NWT8 199 aaPredicted RBP7.46□□□□□ -1.22
POLR2J3-215ENST00000511313 A0A087X0K7 114 aa7.46□□□□□ -1.22
POLR2J3-215ENST00000511313 LINC00587B1AMM8 73 aa7.46□□□□□ -1.22
POLR2J3-215ENST00000511313 GHRHP01286 108 aa7.46□□□□□ -1.22
POLR2J3-215ENST00000511313 MEF2BQ02080 365 aaPredicted RBP7.46□□□□□ -1.22
POLR2J3-215ENST00000511313 ISOC2Q96AB3 205 aa7.46□□□□□ -1.22
POLR2J3-215ENST00000511313 AVPP01185 164 aa7.45□□□□□ -1.22
POLR2J3-215ENST00000511313 FHL3Q13643 280 aa7.45□□□□□ -1.22
POLR2J3-215ENST00000511313 DEFB136Q30KP8 78 aa7.45□□□□□ -1.22
POLR2J3-215ENST00000511313 A0A1B0GW64 132 aa7.45□□□□□ -1.22
POLR2J3-215ENST00000511313 BTN1A1Q13410 526 aa7.45□□□□□ -1.22
POLR2J3-215ENST00000511313 PMS2P11Q13670 270 aa7.45□□□□□ -1.22
POLR2J3-215ENST00000511313 TWIST1Q15672 202 aa7.45□□□□□ -1.22
POLR2J3-215ENST00000511313 TSKUQ8WUA8 353 aa7.45□□□□□ -1.22
POLR2J3-215ENST00000511313 CITED4Q96RK1 184 aa7.45□□□□□ -1.22
POLR2J3-215ENST00000511313 ELF5Q9UKW6 265 aaPredicted RBP7.45□□□□□ -1.22
POLR2J3-215ENST00000511313 TRAV9-1A0A075B6T8 112 aa7.45□□□□□ -1.22
POLR2J3-215ENST00000511313 NDUFS6O75380 124 aaKnown RBP7.45□□□□□ -1.22
POLR2J3-215ENST00000511313 PRSS2P07478 247 aa7.45□□□□□ -1.22
POLR2J3-215ENST00000511313 LINC01559Q495D7 138 aa7.45□□□□□ -1.22
POLR2J3-215ENST00000511313 ABCA1O95477 2261 aa7.45□□□□□ -1.22
POLR2J3-215ENST00000511313 TRBV9A0A0B4J1U6 114 aa7.45□□□□□ -1.22
POLR2J3-215ENST00000511313 TRAV3A0A0B4J244 114 aa7.45□□□□□ -1.22
POLR2J3-215ENST00000511313 NUDT3O95989 172 aa7.45□□□□□ -1.22
POLR2J3-215ENST00000511313 IFITM3Q01628 133 aa7.45□□□□□ -1.22
POLR2J3-215ENST00000511313 NHLH2Q02577 135 aa7.45□□□□□ -1.22
POLR2J3-215ENST00000511313 NCOA6Q14686 2063 aaPredicted RBP7.44□□□□□ -1.22
POLR2J3-215ENST00000511313 H3BRM9 83 aa7.44□□□□□ -1.22
POLR2J3-215ENST00000511313 CRYGBP07316 175 aa7.44□□□□□ -1.22
POLR2J3-215ENST00000511313 DMRTA1Q5VZB9 504 aa7.44□□□□□ -1.22
POLR2J3-215ENST00000511313 ODF3L1Q8IXM7 274 aa7.44□□□□□ -1.22
POLR2J3-215ENST00000511313 WFDC9Q8NEX5 89 aa7.44□□□□□ -1.22
POLR2J3-215ENST00000511313 PARP12Q9H0J9 701 aaKnown RBP7.44□□□□□ -1.22
POLR2J3-215ENST00000511313 TEX22C9J3V5 150 aa7.44□□□□□ -1.22
POLR2J3-215ENST00000511313 HLA-DRB4P13762 266 aa7.44□□□□□ -1.22
POLR2J3-215ENST00000511313 NDPQ00604 133 aa7.44□□□□□ -1.22
POLR2J3-215ENST00000511313 FER1L6-AS1Q8NA97 138 aa7.44□□□□□ -1.22
POLR2J3-215ENST00000511313 RPS10P5Q9NQ39 176 aa7.44□□□□□ -1.22
POLR2J3-215ENST00000511313 HLA-DRB4X5D2U9 266 aa7.44□□□□□ -1.22
POLR2J3-215ENST00000511313 PLCE1Q9P212 2302 aa7.44□□□□□ -1.22
POLR2J3-215ENST00000511313 K7EIM0 57 aa7.44□□□□□ -1.22
POLR2J3-215ENST00000511313 DIAPH2-AS1Q14236 149 aa7.44□□□□□ -1.22
POLR2J3-215ENST00000511313 TCF23Q7RTU1 214 aa7.44□□□□□ -1.22
POLR2J3-215ENST00000511313 B9D2Q9BPU9 175 aa7.44□□□□□ -1.22
POLR2J3-215ENST00000511313 MAP1LC3AQ9H492 121 aa7.44□□□□□ -1.22
POLR2J3-215ENST00000511313 NAT8BQ9UHF3 227 aa7.44□□□□□ -1.22
POLR2J3-215ENST00000511313 PMS2P5A8MQ11 134 aa7.43□□□□□ -1.22
POLR2J3-215ENST00000511313 M0R2P5 195 aa7.43□□□□□ -1.22
POLR2J3-215ENST00000511313 IGLV1-51P01701 117 aa7.43□□□□□ -1.22
POLR2J3-215ENST00000511313 IGHV3-48P01763 117 aa7.43□□□□□ -1.22
POLR2J3-215ENST00000511313 DEFB130BP0DP73 79 aa7.43□□□□□ -1.22
POLR2J3-215ENST00000511313 DEFB130AP0DP74 79 aa7.43□□□□□ -1.22
POLR2J3-215ENST00000511313 TMEM183BQ1AE95 376 aa7.43□□□□□ -1.22
POLR2J3-215ENST00000511313 TMEM183AQ8IXX5 376 aa7.43□□□□□ -1.22
POLR2J3-215ENST00000511313 PRSS3P2Q8NHM4 247 aa7.43□□□□□ -1.22
POLR2J3-215ENST00000511313 CTSGP08311 255 aa7.43□□□□□ -1.22
POLR2J3-215ENST00000511313 TMEM75Q8N9X5 138 aa7.43□□□□□ -1.22
POLR2J3-215ENST00000511313 MYOZ3Q8TDC0 251 aa7.43□□□□□ -1.22
POLR2J3-215ENST00000511313 MAP1LC3CQ9BXW4 147 aa7.43□□□□□ -1.22
POLR2J3-215ENST00000511313 SPTBN5Q9NRC6 3674 aaKnown RBP7.43□□□□□ -1.22
POLR2J3-215ENST00000511313 I3L521 148 aa7.43□□□□□ -1.22
POLR2J3-215ENST00000511313 AZU1P20160 251 aa7.43□□□□□ -1.22
POLR2J3-215ENST00000511313 VSIRQ9H7M9 311 aa7.43□□□□□ -1.22
POLR2J3-215ENST00000511313 STAG3L2P0CL84 134 aa7.43□□□□□ -1.22
POLR2J3-215ENST00000511313 STAG3L3P0CL85 134 aa7.43□□□□□ -1.22
POLR2J3-215ENST00000511313 GZMBP10144 247 aa7.43□□□□□ -1.22
POLR2J3-215ENST00000511313 VWC2Q2TAL6 325 aa7.43□□□□□ -1.22
POLR2J3-215ENST00000511313 IBA57Q5T440 356 aaKnown RBP7.43□□□□□ -1.22
POLR2J3-215ENST00000511313 TMEM61Q8N0U2 210 aa7.43□□□□□ -1.22
POLR2J3-215ENST00000511313 DNAJC30Q96LL9 226 aa7.43□□□□□ -1.22
POLR2J3-215ENST00000511313 CHCHD5Q9BSY4 110 aa7.43□□□□□ -1.22
POLR2J3-215ENST00000511313 CCDC168Q8NDH2 2452 aa7.43□□□□□ -1.22
POLR2J3-215ENST00000511313 TRAV16A0A0A6YYK6 109 aaPredicted RBP7.42□□□□□ -1.22
POLR2J3-215ENST00000511313 C5orf24Q7Z6I8 188 aa7.42□□□□□ -1.22
POLR2J3-215ENST00000511313 GPHA2Q96T91 129 aa7.42□□□□□ -1.22
POLR2J3-215ENST00000511313 SCRT1Q9BWW7 348 aa7.42□□□□□ -1.22
POLR2J3-215ENST00000511313 EXPH5Q8NEV8 1989 aa7.42□□□□□ -1.22
POLR2J3-215ENST00000511313 ALKAL2Q6UX46 152 aa7.42□□□□□ -1.22
POLR2J3-215ENST00000511313 SVIPQ8NHG7 77 aa7.42□□□□□ -1.22
POLR2J3-215ENST00000511313 LY96Q9Y6Y9 160 aa7.42□□□□□ -1.22
POLR2J3-215ENST00000511313 K7EP13 123 aa7.42□□□□□ -1.22
POLR2J3-215ENST00000511313 SAMD10Q9BYL1 202 aa7.42□□□□□ -1.22
POLR2J3-215ENST00000511313 G3V3Q6 166 aa7.42□□□□□ -1.22
POLR2J3-215ENST00000511313 APCSP02743 223 aa7.42□□□□□ -1.22
POLR2J3-215ENST00000511313 AMTP48728 403 aa7.42□□□□□ -1.22
POLR2J3-215ENST00000511313 TMEM263Q8WUH6 116 aaKnown RBP7.42□□□□□ -1.22
POLR2J3-215ENST00000511313 MAP6D1Q9H9H5 199 aa7.42□□□□□ -1.22
POLR2J3-215ENST00000511313 TRBV19A0A075B6N1 114 aa7.41□□□□□ -1.22
POLR2J3-215ENST00000511313 WI2-2373I1.2A0A1W2PRP0 233 aa7.41□□□□□ -1.22
POLR2J3-215ENST00000511313 ST20Q9HBF5 79 aa7.41□□□□□ -1.22
POLR2J3-215ENST00000511313 PRR13Q9NZ81 148 aa7.41□□□□□ -1.22
POLR2J3-215ENST00000511313 XIRP2A4UGR9 3374 aa7.41□□□□□ -1.22
POLR2J3-215ENST00000511313 CSN3P07498 182 aa7.41□□□□□ -1.22
POLR2J3-215ENST00000511313 MALP21145 153 aa7.41□□□□□ -1.22
POLR2J3-215ENST00000511313 MIR17HGQ75NE6 70 aa7.41□□□□□ -1.22
POLR2J3-215ENST00000511313 KLK15Q9H2R5 256 aa7.41□□□□□ -1.22
POLR2J3-215ENST00000511313 TPSG1Q9NRR2 321 aa7.41□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms