RNA–Protein interactions for RNA: ENST00000509101.1

CXCL1-202, Transcript of C-X-C motif chemokine ligand 1, humanhuman

TSL 3

Gene CXCL1, Length 574 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1-202ENST00000509101 SIVA1O15304 175 aa10.96□□□□□ -0.65
CXCL1-202ENST00000509101 TCRBP04435 133 aa10.96□□□□□ -0.65
CXCL1-202ENST00000509101 SNRPCP09234 159 aaKnown RBP10.96□□□□□ -0.65
CXCL1-202ENST00000509101 DNAH10OSP0CZ25 163 aa10.96□□□□□ -0.65
CXCL1-202ENST00000509101 SLC25A6P12236 298 aa10.96□□□□□ -0.65
CXCL1-202ENST00000509101 S100ZQ8WXG8 99 aa10.96□□□□□ -0.65
CXCL1-202ENST00000509101 VSIG2Q96IQ7 327 aa10.96□□□□□ -0.65
CXCL1-202ENST00000509101 C20orf85Q9H1P6 137 aa10.96□□□□□ -0.65
CXCL1-202ENST00000509101 STRAPQ9Y3F4 350 aaKnown RBP10.96□□□□□ -0.65
CXCL1-202ENST00000509101 TRAV6A0A075B6T7 132 aa10.95□□□□□ -0.66
CXCL1-202ENST00000509101 PLP1P60201 277 aa10.95□□□□□ -0.66
CXCL1-202ENST00000509101 KRTAP10-1P60331 282 aa10.95□□□□□ -0.66
CXCL1-202ENST00000509101 IFITM3Q01628 133 aa10.95□□□□□ -0.66
CXCL1-202ENST00000509101 C4orf46Q504U0 113 aa10.95□□□□□ -0.66
CXCL1-202ENST00000509101 Q6ZTI0 123 aa10.95□□□□□ -0.66
CXCL1-202ENST00000509101 PMS2P5A8MQ11 134 aa10.94□□□□□ -0.66
CXCL1-202ENST00000509101 PRAC2D3DTV9 90 aa10.94□□□□□ -0.66
CXCL1-202ENST00000509101 MRPS12O15235 138 aaKnown RBP10.94□□□□□ -0.66
CXCL1-202ENST00000509101 NXPH4O95158 308 aa10.94□□□□□ -0.66
CXCL1-202ENST00000509101 ZNF846Q147U1 533 aa10.94□□□□□ -0.66
CXCL1-202ENST00000509101 LCN15Q6UWW0 184 aa10.94□□□□□ -0.66
CXCL1-202ENST00000509101 ARL6Q9H0F7 186 aa10.94□□□□□ -0.66
CXCL1-202ENST00000509101 ZNF331Q9NQX6 463 aaPredicted RBP10.94□□□□□ -0.66
CXCL1-202ENST00000509101 BATF3Q9NR55 127 aa10.94□□□□□ -0.66
CXCL1-202ENST00000509101 TNFRSF18Q9Y5U5 241 aa10.94□□□□□ -0.66
CXCL1-202ENST00000509101 SMR3BP02814 79 aaPredicted RBP10.93□□□□□ -0.66
CXCL1-202ENST00000509101 CXCL2P19875 107 aa10.93□□□□□ -0.66
CXCL1-202ENST00000509101 RRAS2P62070 204 aaPredicted RBP10.93□□□□□ -0.66
CXCL1-202ENST00000509101 SELENOTP62341 195 aa10.93□□□□□ -0.66
CXCL1-202ENST00000509101 PATE2Q6UY27 113 aa10.93□□□□□ -0.66
CXCL1-202ENST00000509101 C18orf15Q96N68 181 aa10.93□□□□□ -0.66
CXCL1-202ENST00000509101 SLC50A1Q9BRV3 221 aa10.93□□□□□ -0.66
CXCL1-202ENST00000509101 ARV1Q9H2C2 271 aa10.93□□□□□ -0.66
CXCL1-202ENST00000509101 NUDT15Q9NV35 164 aa10.93□□□□□ -0.66
CXCL1-202ENST00000509101 MDFICQ9P1T7 246 aa10.93□□□□□ -0.66
CXCL1-202ENST00000509101 TRGV2A0A075B6R0 118 aa10.92□□□□□ -0.66
CXCL1-202ENST00000509101 TRAV12-3A0A0B4J271 114 aa10.92□□□□□ -0.66
CXCL1-202ENST00000509101 H3BTX0 84 aa10.92□□□□□ -0.66
CXCL1-202ENST00000509101 SLC17A3O00476 420 aa10.92□□□□□ -0.66
CXCL1-202ENST00000509101 UPK1BO75841 260 aa10.92□□□□□ -0.66
CXCL1-202ENST00000509101 CCNKO75909 580 aa10.92□□□□□ -0.66
CXCL1-202ENST00000509101 IFNA5P01569 189 aa10.92□□□□□ -0.66
CXCL1-202ENST00000509101 DAZ2Q13117 558 aaKnown RBP10.92□□□□□ -0.66
CXCL1-202ENST00000509101 ICAM4Q14773 271 aa10.92□□□□□ -0.66
CXCL1-202ENST00000509101 S100A7AQ86SG5 101 aa10.92□□□□□ -0.66
CXCL1-202ENST00000509101 MITD1Q8WV92 249 aa10.92□□□□□ -0.66
CXCL1-202ENST00000509101 SEC22CQ9BRL7 303 aa10.92□□□□□ -0.66
CXCL1-202ENST00000509101 HAMPP81172 84 aa10.91□□□□□ -0.66
CXCL1-202ENST00000509101 ID3Q02535 119 aa10.91□□□□□ -0.66
CXCL1-202ENST00000509101 SLC38A11Q08AI6 406 aa10.91□□□□□ -0.66
CXCL1-202ENST00000509101 ASAH1Q13510 395 aa10.91□□□□□ -0.66
CXCL1-202ENST00000509101 A0A087WTM6 91 aa10.9□□□□□ -0.66
CXCL1-202ENST00000509101 FAM240BA0A1B0GVZ2 78 aa10.9□□□□□ -0.66
CXCL1-202ENST00000509101 CCSO14618 274 aa10.9□□□□□ -0.66
CXCL1-202ENST00000509101 H2AFB2P0C5Z0 115 aa10.9□□□□□ -0.66
CXCL1-202ENST00000509101 LEPP41159 167 aa10.9□□□□□ -0.66
CXCL1-202ENST00000509101 POLR2GP62487 172 aaKnown RBP eCLIP10.9□□□□□ -0.66
CXCL1-202ENST00000509101 PYGO2Q9BRQ0 406 aa10.9□□□□□ -0.66
CXCL1-202ENST00000509101 GSN-AS1Q9NRJ2 163 aa10.9□□□□□ -0.66
CXCL1-202ENST00000509101 PSENENQ9NZ42 101 aa10.9□□□□□ -0.66
CXCL1-202ENST00000509101 ICOSQ9Y6W8 199 aa10.9□□□□□ -0.66
CXCL1-202ENST00000509101 TRGV1A0A0A0MS02 117 aa10.89□□□□□ -0.67
CXCL1-202ENST00000509101 SSSCA1O60232 199 aa10.89□□□□□ -0.67
CXCL1-202ENST00000509101 CT45A10P0DMU9 189 aa10.89□□□□□ -0.67
CXCL1-202ENST00000509101 MZT2BQ6NZ67 158 aa10.89□□□□□ -0.67
CXCL1-202ENST00000509101 LINC00305Q7Z4B0 112 aa10.89□□□□□ -0.67
CXCL1-202ENST00000509101 NFE4Q86UQ8 179 aa10.89□□□□□ -0.67
CXCL1-202ENST00000509101 ZNF431Q8TF32 576 aaPredicted RBP10.89□□□□□ -0.67
CXCL1-202ENST00000509101 RNF24Q9Y225 148 aa10.89□□□□□ -0.67
CXCL1-202ENST00000509101 FUT9Q9Y231 359 aa10.89□□□□□ -0.67
CXCL1-202ENST00000509101 IAH1Q2TAA2 248 aaPredicted RBP10.88□□□□□ -0.67
CXCL1-202ENST00000509101 BPIFA4PQ86YQ2 179 aa10.88□□□□□ -0.67
CXCL1-202ENST00000509101 ZBTB8BQ8NAP8 495 aaPredicted RBP10.88□□□□□ -0.67
CXCL1-202ENST00000509101 C11orf72Q8NBR9 251 aa10.88□□□□□ -0.67
CXCL1-202ENST00000509101 NPIPB6E9PJ23 425 aa10.87□□□□□ -0.67
CXCL1-202ENST00000509101 FAM229AH3BQW9 127 aa10.87□□□□□ -0.67
CXCL1-202ENST00000509101 K7EPK0 472 aa10.87□□□□□ -0.67
CXCL1-202ENST00000509101 PAX4O43316 350 aa10.87□□□□□ -0.67
CXCL1-202ENST00000509101 METTL15P1P0C7V9 234 aa10.87□□□□□ -0.67
CXCL1-202ENST00000509101 MORN5Q5VZ52 161 aa10.87□□□□□ -0.67
CXCL1-202ENST00000509101 TEPPQ6URK8 271 aa10.87□□□□□ -0.67
CXCL1-202ENST00000509101 Q6ZSN1 163 aa10.87□□□□□ -0.67
CXCL1-202ENST00000509101 ZNF680Q8NEM1 530 aa10.87□□□□□ -0.67
CXCL1-202ENST00000509101 ODF3Q96PU9 254 aa10.87□□□□□ -0.67
CXCL1-202ENST00000509101 NPVFQ9HCQ7 196 aa10.87□□□□□ -0.67
CXCL1-202ENST00000509101 GSKIPQ9P0R6 139 aa10.87□□□□□ -0.67
CXCL1-202ENST00000509101 MGAT4CQ9UBM8 478 aa10.87□□□□□ -0.67
CXCL1-202ENST00000509101 PXMP4Q9Y6I8 212 aa10.87□□□□□ -0.67
CXCL1-202ENST00000509101 GOSR2O14653 212 aa10.86□□□□□ -0.67
CXCL1-202ENST00000509101 COX7A2P2O60397 106 aa10.86□□□□□ -0.67
CXCL1-202ENST00000509101 SCGB1D2O95969 90 aa10.86□□□□□ -0.67
CXCL1-202ENST00000509101 IGHV3-53P01767 116 aa10.86□□□□□ -0.67
CXCL1-202ENST00000509101 GCSHP23434 173 aa10.86□□□□□ -0.67
CXCL1-202ENST00000509101 OPCMLQ14982 345 aa10.86□□□□□ -0.67
CXCL1-202ENST00000509101 PXDC1Q5TGL8 231 aa10.86□□□□□ -0.67
CXCL1-202ENST00000509101 NRARPQ7Z6K4 114 aa10.86□□□□□ -0.67
CXCL1-202ENST00000509101 ZNF546Q86UE3 836 aa10.86□□□□□ -0.67
CXCL1-202ENST00000509101 C12orf45Q8N5I9 185 aaPredicted RBP10.86□□□□□ -0.67
CXCL1-202ENST00000509101 C7orf71A4D174 169 aa10.85□□□□□ -0.67
CXCL1-202ENST00000509101 FNDC10F2Z333 226 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms