RNA–Protein interactions for RNA: ENST00000509088.5

LINC01088-205, Transcript of long intergenic non-protein coding RNA 1088, humanhuman

TSL 1 (best) BASIC

Gene LINC01088, Length 756 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01088-205ENST00000509088 C2orf48Q96LS8 159 aa3.84□□□□□ -1.79
LINC01088-205ENST00000509088 IGF2BP2-AS1Q96M15 143 aa3.84□□□□□ -1.79
LINC01088-205ENST00000509088 CHAC1Q9BUX1 264 aa3.84□□□□□ -1.79
LINC01088-205ENST00000509088 PLEKHA3Q9HB20 300 aa3.84□□□□□ -1.79
LINC01088-205ENST00000509088 NHP2Q9NX24 153 aaKnown RBP3.84□□□□□ -1.79
LINC01088-205ENST00000509088 NOTCH2Q04721 2471 aa3.83□□□□□ -1.8
LINC01088-205ENST00000509088 TMED7-TICAM2A0A0A6YYA0 188 aa3.83□□□□□ -1.8
LINC01088-205ENST00000509088 ZNF816-ZNF321PA0A0X1KG74 233 aa3.83□□□□□ -1.8
LINC01088-205ENST00000509088 MYMXA0A1B0GTQ4 84 aa3.83□□□□□ -1.8
LINC01088-205ENST00000509088 IGKV1-5P01602 117 aa3.83□□□□□ -1.8
LINC01088-205ENST00000509088 HBDP02042 147 aa3.83□□□□□ -1.8
LINC01088-205ENST00000509088 P0C879 139 aa3.83□□□□□ -1.8
LINC01088-205ENST00000509088 CNTFRP26992 372 aa3.83□□□□□ -1.8
LINC01088-205ENST00000509088 GLRXP35754 106 aa3.83□□□□□ -1.8
LINC01088-205ENST00000509088 RPL13AP40429 203 aaKnown RBP3.83□□□□□ -1.8
LINC01088-205ENST00000509088 TMEM258P61165 79 aa3.83□□□□□ -1.8
LINC01088-205ENST00000509088 VGLL4Q14135 290 aa3.83□□□□□ -1.8
LINC01088-205ENST00000509088 CST6Q15828 149 aa3.83□□□□□ -1.8
LINC01088-205ENST00000509088 TMEM52BQ4KMG9 183 aa3.83□□□□□ -1.8
LINC01088-205ENST00000509088 CLLU1OSQ5K130 101 aa3.83□□□□□ -1.8
LINC01088-205ENST00000509088 Q71RC1 249 aaPredicted RBP3.83□□□□□ -1.8
LINC01088-205ENST00000509088 FGFRL1Q8N441 504 aa3.83□□□□□ -1.8
LINC01088-205ENST00000509088 C10orf126Q8N4M7 172 aa3.83□□□□□ -1.8
LINC01088-205ENST00000509088 KIR3DL3Q8N743 410 aa3.83□□□□□ -1.8
LINC01088-205ENST00000509088 SLC37A2Q8TED4 501 aa3.83□□□□□ -1.8
LINC01088-205ENST00000509088 IFI27L1Q96BM0 104 aa3.83□□□□□ -1.8
LINC01088-205ENST00000509088 SPACA5Q96QH8 159 aa3.83□□□□□ -1.8
LINC01088-205ENST00000509088 LINC01587Q99440 93 aa3.83□□□□□ -1.8
LINC01088-205ENST00000509088 KIR2DL4Q99706 377 aa3.83□□□□□ -1.8
LINC01088-205ENST00000509088 HSD17B10Q99714 261 aaKnown RBP3.83□□□□□ -1.8
LINC01088-205ENST00000509088 CCL28Q9NRJ3 127 aa3.83□□□□□ -1.8
LINC01088-205ENST00000509088 SCN10AQ9Y5Y9 1956 aa3.83□□□□□ -1.8
LINC01088-205ENST00000509088 TRBV6-1A0A0K0K1D8 114 aa3.82□□□□□ -1.8
LINC01088-205ENST00000509088 HIGD1CA8MV81 97 aa3.82□□□□□ -1.8
LINC01088-205ENST00000509088 IGKV1D-16P01601 117 aa3.82□□□□□ -1.8
LINC01088-205ENST00000509088 IGLV2-8P01709 118 aa3.82□□□□□ -1.8
LINC01088-205ENST00000509088 CRYGAP11844 174 aa3.82□□□□□ -1.8
LINC01088-205ENST00000509088 CYBAP13498 195 aa3.82□□□□□ -1.8
LINC01088-205ENST00000509088 RPL35AP18077 110 aaKnown RBP3.82□□□□□ -1.8
LINC01088-205ENST00000509088 FXYD2P54710 66 aa3.82□□□□□ -1.8
LINC01088-205ENST00000509088 UBE2D3P61077 147 aa3.82□□□□□ -1.8
LINC01088-205ENST00000509088 UBE2D2P62837 147 aa3.82□□□□□ -1.8
LINC01088-205ENST00000509088 DIAPH2-AS1Q14236 149 aa3.82□□□□□ -1.8
LINC01088-205ENST00000509088 ZNF542PQ5EBM4 170 aa3.82□□□□□ -1.8
LINC01088-205ENST00000509088 C9orf153Q5TBE3 101 aa3.82□□□□□ -1.8
LINC01088-205ENST00000509088 PLPP4Q5VZY2 271 aa3.82□□□□□ -1.8
LINC01088-205ENST00000509088 VN1R4Q7Z5H5 301 aa3.82□□□□□ -1.8
LINC01088-205ENST00000509088 MKXQ8IYA7 352 aa3.82□□□□□ -1.8
LINC01088-205ENST00000509088 COPS9Q8WXC6 57 aa3.82□□□□□ -1.8
LINC01088-205ENST00000509088 MGST2Q99735 147 aa3.82□□□□□ -1.8
LINC01088-205ENST00000509088 HDHD3Q9BSH5 251 aaPredicted RBP3.82□□□□□ -1.8
LINC01088-205ENST00000509088 RNASE7Q9H1E1 156 aaKnown RBP3.82□□□□□ -1.8
LINC01088-205ENST00000509088 PRORYQ9H606 182 aa3.82□□□□□ -1.8
LINC01088-205ENST00000509088 RPP21Q9H633 154 aaKnown RBP3.82□□□□□ -1.8
LINC01088-205ENST00000509088 CHCHD2Q9Y6H1 151 aaPredicted RBP3.82□□□□□ -1.8
LINC01088-205ENST00000509088 GON4LQ3T8J9 2241 aa3.82□□□□□ -1.8
LINC01088-205ENST00000509088 PHF3Q92576 2039 aaKnown RBP3.82□□□□□ -1.8
LINC01088-205ENST00000509088 SPAG17Q6Q759 2223 aa3.81□□□□□ -1.8
LINC01088-205ENST00000509088 TRBV25-1A0A075B6N4 114 aa3.81□□□□□ -1.8
LINC01088-205ENST00000509088 TRAV2A0A0B4J234 112 aa3.81□□□□□ -1.8
LINC01088-205ENST00000509088 LINC01546A6NGU7 62 aa3.81□□□□□ -1.8
LINC01088-205ENST00000509088 FRG2CA6NGY1 282 aa3.81□□□□□ -1.8
LINC01088-205ENST00000509088 C15orf61A6NNL5 157 aa3.81□□□□□ -1.8
LINC01088-205ENST00000509088 NCBP2LA6PVI3 153 aaKnown RBP3.81□□□□□ -1.8
LINC01088-205ENST00000509088 C4orf51C9J302 202 aa3.81□□□□□ -1.8
LINC01088-205ENST00000509088 NDUFC2-KCTD14E9PQ53 114 aa3.81□□□□□ -1.8
LINC01088-205ENST00000509088 RS1O15537 224 aa3.81□□□□□ -1.8
LINC01088-205ENST00000509088 SPINK4O60575 86 aa3.81□□□□□ -1.8
LINC01088-205ENST00000509088 DPM2O94777 84 aa3.81□□□□□ -1.8
LINC01088-205ENST00000509088 RBP4P02753 201 aa3.81□□□□□ -1.8
LINC01088-205ENST00000509088 CECR9P0C854 216 aa3.81□□□□□ -1.8
LINC01088-205ENST00000509088 LINC00694P0DN24 101 aa3.81□□□□□ -1.8
LINC01088-205ENST00000509088 RPL7P18124 248 aaKnown RBP3.81□□□□□ -1.8
LINC01088-205ENST00000509088 PLNP26678 52 aa3.81□□□□□ -1.8
LINC01088-205ENST00000509088 HLA-DMBP28068 263 aa3.81□□□□□ -1.8
LINC01088-205ENST00000509088 CXCL5P42830 114 aa3.81□□□□□ -1.8
LINC01088-205ENST00000509088 NMUP48645 174 aa3.81□□□□□ -1.8
LINC01088-205ENST00000509088 INSL3P51460 131 aa3.81□□□□□ -1.8
LINC01088-205ENST00000509088 EDDM3BP56851 147 aa3.81□□□□□ -1.8
LINC01088-205ENST00000509088 SEC61GP60059 68 aa3.81□□□□□ -1.8
LINC01088-205ENST00000509088 FGF12P61328 243 aa3.81□□□□□ -1.8
LINC01088-205ENST00000509088 TFF3Q07654 80 aa3.81□□□□□ -1.8
LINC01088-205ENST00000509088 SRSF9Q13242 221 aaKnown RBP eCLIP3.81□□□□□ -1.8
LINC01088-205ENST00000509088 OR1C1Q15619 314 aa3.81□□□□□ -1.8
LINC01088-205ENST00000509088 ZNF77Q15935 545 aa3.81□□□□□ -1.8
LINC01088-205ENST00000509088 DEFB134Q4QY38 66 aa3.81□□□□□ -1.8
LINC01088-205ENST00000509088 MYO7BQ6PIF6 2116 aa3.81□□□□□ -1.8
LINC01088-205ENST00000509088 Q8N7P7 452 aa3.81□□□□□ -1.8
LINC01088-205ENST00000509088 OR1L8Q8NGR8 309 aa3.81□□□□□ -1.8
LINC01088-205ENST00000509088 BAALCQ8WXS3 180 aa3.81□□□□□ -1.8
LINC01088-205ENST00000509088 SNRNP40Q96DI7 357 aaKnown RBP3.81□□□□□ -1.8
LINC01088-205ENST00000509088 CARD19Q96LW7 228 aa3.81□□□□□ -1.8
LINC01088-205ENST00000509088 HIST1H4GQ99525 98 aa3.81□□□□□ -1.8
LINC01088-205ENST00000509088 NAA38Q9BRA0 125 aaKnown RBP3.81□□□□□ -1.8
LINC01088-205ENST00000509088 PRNDQ9UKY0 176 aa3.81□□□□□ -1.8
LINC01088-205ENST00000509088 FZR1Q9UM11 496 aa3.81□□□□□ -1.8
LINC01088-205ENST00000509088 ARHGAP21Q5T5U3 1957 aa3.81□□□□□ -1.8
LINC01088-205ENST00000509088 KIAA1549Q9HCM3 1950 aa3.81□□□□□ -1.8
LINC01088-205ENST00000509088 TRAV8-2A0A0B4J237 113 aa3.8□□□□□ -1.8
LINC01088-205ENST00000509088 TRAV8-4A0A0B4J246 113 aa3.8□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 66.3 ms