RNA–Protein interactions for RNA: ENST00000508692.1

COL4A3BP-205, Transcript of collagen type IV alpha 3 binding protein, humanhuman

TSL 5

Gene COL4A3BP, Length 508 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BP-205ENST00000508692 ZC2HC1AQ96GY0 325 aa0.94□□□□□ -2.26
COL4A3BP-205ENST00000508692 SELENOSQ9BQE4 189 aa0.94□□□□□ -2.26
COL4A3BP-205ENST00000508692 LRTM1Q9HBL6 345 aa0.94□□□□□ -2.26
COL4A3BP-205ENST00000508692 SMPXQ9UHP9 88 aa0.94□□□□□ -2.26
COL4A3BP-205ENST00000508692 MCM3APO60318 1980 aa0.94□□□□□ -2.26
COL4A3BP-205ENST00000508692 COL1A1P02452 1464 aaPredicted RBP0.93□□□□□ -2.26
COL4A3BP-205ENST00000508692 GABARAPH6UMI1 98 aa0.93□□□□□ -2.26
COL4A3BP-205ENST00000508692 KLF7O75840 302 aaPredicted RBP0.93□□□□□ -2.26
COL4A3BP-205ENST00000508692 LINC00575Q6W349 94 aa0.93□□□□□ -2.26
COL4A3BP-205ENST00000508692 DIRC1Q969H9 104 aa0.93□□□□□ -2.26
COL4A3BP-205ENST00000508692 CST11Q9H112 138 aa0.93□□□□□ -2.26
COL4A3BP-205ENST00000508692 TPRKBQ9Y3C4 175 aa0.93□□□□□ -2.26
COL4A3BP-205ENST00000508692 KIAA1549Q9HCM3 1950 aa0.93□□□□□ -2.26
COL4A3BP-205ENST00000508692 E9PCH4 1651 aa0.93□□□□□ -2.26
COL4A3BP-205ENST00000508692 SCN3AQ9NY46 2000 aa0.93□□□□□ -2.26
COL4A3BP-205ENST00000508692 MYLKQ15746 1914 aa0.92□□□□□ -2.26
COL4A3BP-205ENST00000508692 A0A1W2PPM0 123 aa0.92□□□□□ -2.26
COL4A3BP-205ENST00000508692 A0A1W2PRE2 83 aa0.92□□□□□ -2.26
COL4A3BP-205ENST00000508692 C9orf170A2RU37 121 aa0.92□□□□□ -2.26
COL4A3BP-205ENST00000508692 C5orf67F2Z3F1 127 aa0.92□□□□□ -2.26
COL4A3BP-205ENST00000508692 PPYP01298 95 aa0.92□□□□□ -2.26
COL4A3BP-205ENST00000508692 FABP2P12104 132 aa0.92□□□□□ -2.26
COL4A3BP-205ENST00000508692 FABP4P15090 132 aa0.92□□□□□ -2.26
COL4A3BP-205ENST00000508692 SDC2P34741 201 aa0.92□□□□□ -2.26
COL4A3BP-205ENST00000508692 EFNA4P52798 201 aa0.92□□□□□ -2.26
COL4A3BP-205ENST00000508692 TOMM20LQ6UXN7 152 aa0.92□□□□□ -2.26
COL4A3BP-205ENST00000508692 LINC00299Q6ZSB3 139 aa0.92□□□□□ -2.26
COL4A3BP-205ENST00000508692 SMIM15Q7Z3B0 74 aa0.92□□□□□ -2.26
COL4A3BP-205ENST00000508692 OR10AC1Q8NH08 325 aa0.92□□□□□ -2.26
COL4A3BP-205ENST00000508692 CARD19Q96LW7 228 aa0.92□□□□□ -2.26
COL4A3BP-205ENST00000508692 OR4C12Q96R67 309 aa0.92□□□□□ -2.26
COL4A3BP-205ENST00000508692 EFCAB11Q9BUY7 163 aa0.92□□□□□ -2.26
COL4A3BP-205ENST00000508692 NUP210LQ5VU65 1888 aa0.91□□□□□ -2.26
COL4A3BP-205ENST00000508692 C5orf58C9J3I9 102 aa0.91□□□□□ -2.26
COL4A3BP-205ENST00000508692 PGRMC1O00264 195 aaKnown RBP0.91□□□□□ -2.26
COL4A3BP-205ENST00000508692 IFNA21P01568 189 aa0.91□□□□□ -2.26
COL4A3BP-205ENST00000508692 IGLV3-1P01715 115 aa0.91□□□□□ -2.26
COL4A3BP-205ENST00000508692 IGHV3-33P01772 117 aa0.91□□□□□ -2.26
COL4A3BP-205ENST00000508692 S100A11P31949 105 aa0.91□□□□□ -2.26
COL4A3BP-205ENST00000508692 VMA21Q3ZAQ7 101 aa0.91□□□□□ -2.26
COL4A3BP-205ENST00000508692 SPATA45Q537H7 98 aa0.91□□□□□ -2.26
COL4A3BP-205ENST00000508692 FOXI2Q6ZQN5 318 aa0.91□□□□□ -2.26
COL4A3BP-205ENST00000508692 CCL4L1Q8NHW4 92 aa0.91□□□□□ -2.26
COL4A3BP-205ENST00000508692 THEM6Q8WUY1 208 aa0.91□□□□□ -2.26
COL4A3BP-205ENST00000508692 DDA1Q9BW61 102 aa0.91□□□□□ -2.26
COL4A3BP-205ENST00000508692 TNRC6AQ8NDV7 1962 aaKnown RBP0.9□□□□□ -2.26
COL4A3BP-205ENST00000508692 ERBINQ96RT1 1412 aa0.9□□□□□ -2.26
COL4A3BP-205ENST00000508692 COL24A1Q17RW2 1714 aa0.9□□□□□ -2.27
COL4A3BP-205ENST00000508692 H7BYZ3 331 aa0.9□□□□□ -2.27
COL4A3BP-205ENST00000508692 SRP9P49458 86 aaKnown RBP0.9□□□□□ -2.27
COL4A3BP-205ENST00000508692 PRB3Q04118 309 aaPredicted RBP0.9□□□□□ -2.27
COL4A3BP-205ENST00000508692 DIAPH2-AS1Q14236 149 aa0.9□□□□□ -2.27
COL4A3BP-205ENST00000508692 OR5H6Q8NGV6 325 aa0.9□□□□□ -2.27
COL4A3BP-205ENST00000508692 OR5AK2Q8NH90 309 aa0.9□□□□□ -2.27
COL4A3BP-205ENST00000508692 PRELID3AQ96N28 172 aa0.9□□□□□ -2.27
COL4A3BP-205ENST00000508692 LXNQ9BS40 222 aa0.9□□□□□ -2.27
COL4A3BP-205ENST00000508692 TRBV7-6A0A0J9YX20 115 aa0.89□□□□□ -2.27
COL4A3BP-205ENST00000508692 TRACP01848 142 aa0.89□□□□□ -2.27
COL4A3BP-205ENST00000508692 SAA1P0DJI8 122 aaPredicted RBP0.89□□□□□ -2.27
COL4A3BP-205ENST00000508692 TPT1P13693 172 aaKnown RBP0.89□□□□□ -2.27
COL4A3BP-205ENST00000508692 MIR22HGQ0VDD5 57 aa0.89□□□□□ -2.27
COL4A3BP-205ENST00000508692 LINC00269Q8N2A0 174 aa0.89□□□□□ -2.27
COL4A3BP-205ENST00000508692 Q8N6K4 173 aa0.89□□□□□ -2.27
COL4A3BP-205ENST00000508692 OR9Q1Q8NGQ5 310 aa0.89□□□□□ -2.27
COL4A3BP-205ENST00000508692 WFDC10AQ9H1F0 79 aa0.89□□□□□ -2.27
COL4A3BP-205ENST00000508692 MED31Q9Y3C7 131 aa0.89□□□□□ -2.27
COL4A3BP-205ENST00000508692 NCOA6Q14686 2063 aaPredicted RBP0.88□□□□□ -2.27
COL4A3BP-205ENST00000508692 MGAMO43451 1857 aa0.88□□□□□ -2.27
COL4A3BP-205ENST00000508692 PBRM1Q86U86 1689 aa0.88□□□□□ -2.27
COL4A3BP-205ENST00000508692 POLR2HP52434 150 aaKnown RBP0.88□□□□□ -2.27
COL4A3BP-205ENST00000508692 MAXP61244 160 aa0.88□□□□□ -2.27
COL4A3BP-205ENST00000508692 SAMD13Q5VXD3 122 aa0.88□□□□□ -2.27
COL4A3BP-205ENST00000508692 CASC2Q6XLA1 102 aa0.88□□□□□ -2.27
COL4A3BP-205ENST00000508692 LINC00305Q7Z4B0 112 aa0.88□□□□□ -2.27
COL4A3BP-205ENST00000508692 GRPEL2Q8TAA5 225 aa0.88□□□□□ -2.27
COL4A3BP-205ENST00000508692 RMND5BQ96G75 393 aaPredicted RBP0.88□□□□□ -2.27
COL4A3BP-205ENST00000508692 PLXNA4Q9HCM2 1894 aa0.88□□□□□ -2.27
COL4A3BP-205ENST00000508692 MYO5AQ9Y4I1 1855 aaKnown RBP0.88□□□□□ -2.27
COL4A3BP-205ENST00000508692 ALPK3Q96L96 1907 aa0.87□□□□□ -2.27
COL4A3BP-205ENST00000508692 TCOF1Q13428 1488 aaKnown RBP0.87□□□□□ -2.27
COL4A3BP-205ENST00000508692 TRAV23DV6A0A075B6W5 121 aa0.87□□□□□ -2.27
COL4A3BP-205ENST00000508692 TRBV27A0A0K0K1C4 114 aa0.87□□□□□ -2.27
COL4A3BP-205ENST00000508692 LSM3P62310 102 aaKnown RBP0.87□□□□□ -2.27
COL4A3BP-205ENST00000508692 SKA2Q8WVK7 121 aaPredicted RBP0.87□□□□□ -2.27
COL4A3BP-205ENST00000508692 TAF9BQ9HBM6 251 aa0.87□□□□□ -2.27
COL4A3BP-205ENST00000508692 BOKQ9UMX3 212 aaPredicted RBP0.87□□□□□ -2.27
COL4A3BP-205ENST00000508692 N4BP2Q86UW6 1770 aaPredicted RBP0.87□□□□□ -2.27
COL4A3BP-205ENST00000508692 BCL9O00512 1426 aa0.87□□□□□ -2.27
COL4A3BP-205ENST00000508692 MYH2Q9UKX2 1941 aa0.87□□□□□ -2.27
COL4A3BP-205ENST00000508692 FREM3P0C091 2139 aa0.86□□□□□ -2.27
COL4A3BP-205ENST00000508692 DLC1Q96QB1 1528 aa0.86□□□□□ -2.27
COL4A3BP-205ENST00000508692 TRAV13-1A0A0B4J241 112 aa0.86□□□□□ -2.27
COL4A3BP-205ENST00000508692 A0A0J9YY99 117 aa0.86□□□□□ -2.27
COL4A3BP-205ENST00000508692 TSTD3H0UI37 97 aa0.86□□□□□ -2.27
COL4A3BP-205ENST00000508692 S100GP29377 79 aa0.86□□□□□ -2.27
COL4A3BP-205ENST00000508692 TMEM128Q5BJH2 165 aa0.86□□□□□ -2.27
COL4A3BP-205ENST00000508692 CLEC2BQ92478 149 aa0.86□□□□□ -2.27
COL4A3BP-205ENST00000508692 SIP14410 1827 aa0.85□□□□□ -2.27
COL4A3BP-205ENST00000508692 C3orf85A0A1B0GTC6 90 aa0.85□□□□□ -2.27
COL4A3BP-205ENST00000508692 LOC107986453A0A1B0GWG9 222 aa0.85□□□□□ -2.27
Retrieved 100 of 20,778 RNA–protein pairs in 88.7 ms