RNA–Protein interactions for RNA: ENST00000508274.5

RAB28-205, Transcript of RAB28, member RAS oncogene family, humanhuman

TSL 1 (best)

Gene RAB28, Length 1,551 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB28-205ENST00000508274 STX12Q86Y82 276 aa10.09□□□□□ -0.79
RAB28-205ENST00000508274 LINC01587Q99440 93 aa10.09□□□□□ -0.79
RAB28-205ENST00000508274 DEFB130BP0DP73 79 aa10.09□□□□□ -0.79
RAB28-205ENST00000508274 DEFB130AP0DP74 79 aa10.09□□□□□ -0.79
RAB28-205ENST00000508274 HTN1P15515 57 aa10.09□□□□□ -0.79
RAB28-205ENST00000508274 FGF7P21781 194 aa10.09□□□□□ -0.79
RAB28-205ENST00000508274 TSPOP30536 169 aa10.09□□□□□ -0.79
RAB28-205ENST00000508274 OR1L4Q8NGR5 311 aa10.09□□□□□ -0.79
RAB28-205ENST00000508274 ENKURQ8TC29 256 aa10.09□□□□□ -0.79
RAB28-205ENST00000508274 FAM210BQ96KR6 192 aa10.09□□□□□ -0.79
RAB28-205ENST00000508274 GPN1Q9HCN4 374 aaPredicted RBP10.09□□□□□ -0.79
RAB28-205ENST00000508274 ZNF586Q9NXT0 402 aa10.09□□□□□ -0.79
RAB28-205ENST00000508274 PXMP4Q9Y6I8 212 aa10.09□□□□□ -0.79
RAB28-205ENST00000508274 LYRM9A8MSI8 78 aa10.08□□□□□ -0.8
RAB28-205ENST00000508274 RPL29P47914 159 aaKnown RBP10.08□□□□□ -0.8
RAB28-205ENST00000508274 HBG1P69891 147 aa10.08□□□□□ -0.8
RAB28-205ENST00000508274 HBG2P69892 147 aa10.08□□□□□ -0.8
RAB28-205ENST00000508274 UBE2DNLQ8IWF7 75 aa10.08□□□□□ -0.8
RAB28-205ENST00000508274 TMEM256Q8N2U0 113 aa10.08□□□□□ -0.8
RAB28-205ENST00000508274 PFDN5Q99471 154 aa10.08□□□□□ -0.8
RAB28-205ENST00000508274 IGLV2-18A0A075B6J9 118 aa10.07□□□□□ -0.8
RAB28-205ENST00000508274 J3KRW8 73 aa10.07□□□□□ -0.8
RAB28-205ENST00000508274 TAS2R60P59551 318 aa10.07□□□□□ -0.8
RAB28-205ENST00000508274 NHLH2Q02577 135 aa10.07□□□□□ -0.8
RAB28-205ENST00000508274 LRRC37A5PQ49AS3 106 aa10.07□□□□□ -0.8
RAB28-205ENST00000508274 GCSAMLQ5JQS6 135 aa10.07□□□□□ -0.8
RAB28-205ENST00000508274 OR10J6PQ8NGY7 276 aa10.07□□□□□ -0.8
RAB28-205ENST00000508274 THAP6Q8TBB0 222 aa10.07□□□□□ -0.8
RAB28-205ENST00000508274 PKHD1P08F94 4074 aa10.07□□□□□ -0.8
RAB28-205ENST00000508274 GFI1BQ5VTD9 330 aa10.06□□□□□ -0.8
RAB28-205ENST00000508274 RNASE8Q8TDE3 154 aaKnown RBP10.06□□□□□ -0.8
RAB28-205ENST00000508274 NPCDR1Q9BY65 106 aa10.06□□□□□ -0.8
RAB28-205ENST00000508274 OR5AC2Q9NZP5 309 aa10.06□□□□□ -0.8
RAB28-205ENST00000508274 HERC2O95714 4834 aa10.06□□□□□ -0.8
RAB28-205ENST00000508274 DNAH17Q9UFH2 4485 aa10.06□□□□□ -0.8
RAB28-205ENST00000508274 M0R3E3 92 aa10.05□□□□□ -0.8
RAB28-205ENST00000508274 PYYP10082 97 aa10.05□□□□□ -0.8
RAB28-205ENST00000508274 CHAC2Q8WUX2 184 aa10.05□□□□□ -0.8
RAB28-205ENST00000508274 C16orf74Q96GX8 76 aa10.05□□□□□ -0.8
RAB28-205ENST00000508274 H0YIZ8 118 aa10.05□□□□□ -0.8
RAB28-205ENST00000508274 CT45A10P0DMU9 189 aa10.05□□□□□ -0.8
RAB28-205ENST00000508274 GUK1Q16774 197 aa10.05□□□□□ -0.8
RAB28-205ENST00000508274 ATP6V1FQ16864 119 aa10.05□□□□□ -0.8
RAB28-205ENST00000508274 OR5C1Q8NGR4 320 aa10.05□□□□□ -0.8
RAB28-205ENST00000508274 NOP10Q9NPE3 64 aaKnown RBP10.05□□□□□ -0.8
RAB28-205ENST00000508274 TRBV19A0A075B6N1 114 aa10.04□□□□□ -0.8
RAB28-205ENST00000508274 F5H768 121 aa10.04□□□□□ -0.8
RAB28-205ENST00000508274 H7BYZ3 331 aa10.04□□□□□ -0.8
RAB28-205ENST00000508274 RTL8CO15255 209 aa10.04□□□□□ -0.8
RAB28-205ENST00000508274 MPDU1O75352 247 aa10.04□□□□□ -0.8
RAB28-205ENST00000508274 NDUFB4O95168 129 aa10.04□□□□□ -0.8
RAB28-205ENST00000508274 H2BFSP57053 126 aa10.04□□□□□ -0.8
RAB28-205ENST00000508274 CLINT1Q14677 625 aa10.04□□□□□ -0.8
RAB28-205ENST00000508274 TMEM263Q8WUH6 116 aaKnown RBP10.04□□□□□ -0.8
RAB28-205ENST00000508274 NMES1Q9C002 83 aa10.04□□□□□ -0.8
RAB28-205ENST00000508274 TIMM8BQ9Y5J9 83 aaPredicted RBP10.04□□□□□ -0.8
RAB28-205ENST00000508274 NPIPB6E9PJ23 425 aa10.03□□□□□ -0.8
RAB28-205ENST00000508274 INMT-MINDY4F8WBC2 141 aa10.03□□□□□ -0.8
RAB28-205ENST00000508274 ZNF253O75346 499 aa10.03□□□□□ -0.8
RAB28-205ENST00000508274 ERCC8Q13216 396 aa10.03□□□□□ -0.8
RAB28-205ENST00000508274 LINC00336Q6ZUF6 198 aa10.03□□□□□ -0.8
RAB28-205ENST00000508274 BLNKQ8WV28 456 aa10.03□□□□□ -0.8
RAB28-205ENST00000508274 C20orf144Q9BQM9 153 aa10.03□□□□□ -0.8
RAB28-205ENST00000508274 TMEM14CQ9P0S9 112 aa10.03□□□□□ -0.8
RAB28-205ENST00000508274 TRAV12-3A0A0B4J271 114 aa10.02□□□□□ -0.81
RAB28-205ENST00000508274 E5RGE8 158 aa10.02□□□□□ -0.81
RAB28-205ENST00000508274 ATP5G1P05496 136 aa10.02□□□□□ -0.81
RAB28-205ENST00000508274 HIST1H1EP10412 219 aaKnown RBP10.02□□□□□ -0.81
RAB28-205ENST00000508274 ATP5G3P48201 142 aa10.02□□□□□ -0.81
RAB28-205ENST00000508274 LGALS9BQ3B8N2 356 aa10.02□□□□□ -0.81
RAB28-205ENST00000508274 MIR17HGQ75NE6 70 aa10.02□□□□□ -0.81
RAB28-205ENST00000508274 EXOC3-AS1Q8N2X6 119 aa10.02□□□□□ -0.81
RAB28-205ENST00000508274 C15orf53Q8NAA6 179 aa10.02□□□□□ -0.81
RAB28-205ENST00000508274 SLC25A2Q9BXI2 301 aa10.02□□□□□ -0.81
RAB28-205ENST00000508274 SLC25A31Q9H0C2 315 aa10.02□□□□□ -0.81
RAB28-205ENST00000508274 KIAA1109Q2LD37 5005 aa10.02□□□□□ -0.81
RAB28-205ENST00000508274 A0A1B0GVY2 172 aa10.01□□□□□ -0.81
RAB28-205ENST00000508274 CBY3A6NI87 242 aa10.01□□□□□ -0.81
RAB28-205ENST00000508274 PRAF2O60831 178 aa10.01□□□□□ -0.81
RAB28-205ENST00000508274 RLN2P04090 185 aa10.01□□□□□ -0.81
RAB28-205ENST00000508274 RNF212Q495C1 297 aa10.01□□□□□ -0.81
RAB28-205ENST00000508274 ZNF493Q6ZR52 646 aa10.01□□□□□ -0.81
RAB28-205ENST00000508274 Q6ZR54 194 aa10.01□□□□□ -0.81
RAB28-205ENST00000508274 PPP1R1CQ8WVI7 109 aa10.01□□□□□ -0.81
RAB28-205ENST00000508274 FAM167A-AS1Q96KT0 104 aa10.01□□□□□ -0.81
RAB28-205ENST00000508274 ODF3Q96PU9 254 aa10.01□□□□□ -0.81
RAB28-205ENST00000508274 MARVELD1Q9BSK0 173 aa10.01□□□□□ -0.81
RAB28-205ENST00000508274 TIMM9Q9Y5J7 89 aa10.01□□□□□ -0.81
RAB28-205ENST00000508274 NUDT3O95989 172 aa10.01□□□□□ -0.81
RAB28-205ENST00000508274 LEPP41159 167 aa10.01□□□□□ -0.81
RAB28-205ENST00000508274 MRPL53Q96EL3 112 aaKnown RBP10.01□□□□□ -0.81
RAB28-205ENST00000508274 WDR61Q9GZS3 305 aaKnown RBP10.01□□□□□ -0.81
RAB28-205ENST00000508274 PGPEP1Q9NXJ5 209 aa10.01□□□□□ -0.81
RAB28-205ENST00000508274 PKD1P98161 4303 aa10□□□□□ -0.81
RAB28-205ENST00000508274 PRSS29PA6NIE9 313 aa10□□□□□ -0.81
RAB28-205ENST00000508274 PDE6HQ13956 83 aa10□□□□□ -0.81
RAB28-205ENST00000508274 ICAM4Q14773 271 aa10□□□□□ -0.81
RAB28-205ENST00000508274 CCDC28AQ8IWP9 274 aa10□□□□□ -0.81
RAB28-205ENST00000508274 IGKV2-40A0A087WW87 121 aaPredicted RBP9.99□□□□□ -0.81
RAB28-205ENST00000508274 IGKV2D-40P01614 121 aaPredicted RBP9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 84 ms