RNA–Protein interactions for RNA: ENST00000508170.5

PDGFRA-206, Transcript of platelet derived growth factor receptor alpha, humanhuman

TSL 1 (best) BASIC

Gene PDGFRA, Length 2,202 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-206ENST00000508170 RPL30P62888 115 aaKnown RBP5.47□□□□□ -1.53
PDGFRA-206ENST00000508170 ATP6V0E2Q8NHE4 81 aa5.47□□□□□ -1.53
PDGFRA-206ENST00000508170 SLC39A9Q9NUM3 307 aa5.47□□□□□ -1.53
PDGFRA-206ENST00000508170 KLK5Q9Y337 293 aaPredicted RBP5.47□□□□□ -1.53
PDGFRA-206ENST00000508170 A0A0C4DFX4 3053 aa5.47□□□□□ -1.53
PDGFRA-206ENST00000508170 PLXNA4Q9HCM2 1894 aa5.47□□□□□ -1.53
PDGFRA-206ENST00000508170 LOC730098B7Z3J9 87 aa5.47□□□□□ -1.53
PDGFRA-206ENST00000508170 IGHA1P01876 353 aa5.47□□□□□ -1.53
PDGFRA-206ENST00000508170 CD3DP04234 171 aa5.47□□□□□ -1.53
PDGFRA-206ENST00000508170 C9orf66Q5T8R8 295 aa5.47□□□□□ -1.53
PDGFRA-206ENST00000508170 APCDD1LQ8NCL9 501 aa5.47□□□□□ -1.53
PDGFRA-206ENST00000508170 Q9H3A6 140 aa5.47□□□□□ -1.53
PDGFRA-206ENST00000508170 C7orf66A4D0T2 115 aa5.46□□□□□ -1.54
PDGFRA-206ENST00000508170 RBP4P02753 201 aa5.46□□□□□ -1.54
PDGFRA-206ENST00000508170 SNCAP37840 140 aa5.46□□□□□ -1.54
PDGFRA-206ENST00000508170 CLECL1Q8IZS7 167 aa5.46□□□□□ -1.54
PDGFRA-206ENST00000508170 OR2T35Q8NGX2 323 aa5.46□□□□□ -1.54
PDGFRA-206ENST00000508170 SLC35B3Q9H1N7 401 aa5.46□□□□□ -1.54
PDGFRA-206ENST00000508170 CASP8AP2Q9UKL3 1982 aa5.46□□□□□ -1.54
PDGFRA-206ENST00000508170 HIST1H2BKO60814 126 aa5.46□□□□□ -1.54
PDGFRA-206ENST00000508170 HIST1H2BJP06899 126 aa5.46□□□□□ -1.54
PDGFRA-206ENST00000508170 HMGA1P17096 107 aaKnown RBP5.46□□□□□ -1.54
PDGFRA-206ENST00000508170 HINT1P49773 126 aaPredicted RBP5.46□□□□□ -1.54
PDGFRA-206ENST00000508170 SNRPGP62308 76 aaKnown RBP5.46□□□□□ -1.54
PDGFRA-206ENST00000508170 SPRNQ5BIV9 151 aa5.46□□□□□ -1.54
PDGFRA-206ENST00000508170 Q6ZS92 163 aa5.46□□□□□ -1.54
PDGFRA-206ENST00000508170 METTL27Q8N6F8 245 aaPredicted RBP5.46□□□□□ -1.54
PDGFRA-206ENST00000508170 DAND5Q8N907 189 aa5.46□□□□□ -1.54
PDGFRA-206ENST00000508170 ANAPC1Q9H1A4 1944 aa5.45□□□□□ -1.54
PDGFRA-206ENST00000508170 TRGV5A0A0B4J1U4 118 aa5.45□□□□□ -1.54
PDGFRA-206ENST00000508170 ZNF324O75467 553 aaPredicted RBP5.45□□□□□ -1.54
PDGFRA-206ENST00000508170 SNCGO76070 127 aa5.45□□□□□ -1.54
PDGFRA-206ENST00000508170 SLC25A14O95258 325 aaPredicted RBP5.45□□□□□ -1.54
PDGFRA-206ENST00000508170 IGKV1-39P01597 117 aa5.45□□□□□ -1.54
PDGFRA-206ENST00000508170 IGKV1D-39P04432 117 aa5.45□□□□□ -1.54
PDGFRA-206ENST00000508170 CD7P09564 240 aa5.45□□□□□ -1.54
PDGFRA-206ENST00000508170 DSCR9P59020 149 aa5.45□□□□□ -1.54
PDGFRA-206ENST00000508170 XP32Q5T750 250 aa5.45□□□□□ -1.54
PDGFRA-206ENST00000508170 ZNF575Q86XF7 245 aa5.45□□□□□ -1.54
PDGFRA-206ENST00000508170 TET1Q8NFU7 2136 aa5.45□□□□□ -1.54
PDGFRA-206ENST00000508170 CSAG2Q9Y5P2 127 aa5.45□□□□□ -1.54
PDGFRA-206ENST00000508170 SCN8AQ9UQD0 1980 aa5.45□□□□□ -1.54
PDGFRA-206ENST00000508170 NUP214P35658 2090 aaPredicted RBP5.45□□□□□ -1.54
PDGFRA-206ENST00000508170 KRTAP4-16G5E9R7 235 aaPredicted RBP5.44□□□□□ -1.54
PDGFRA-206ENST00000508170 RNASE4P34096 147 aaKnown RBP5.44□□□□□ -1.54
PDGFRA-206ENST00000508170 SLC25A29Q8N8R3 303 aa5.44□□□□□ -1.54
PDGFRA-206ENST00000508170 DSCR8Q96T75 97 aa5.44□□□□□ -1.54
PDGFRA-206ENST00000508170 CELA1Q9UNI1 258 aa5.44□□□□□ -1.54
PDGFRA-206ENST00000508170 COL4A3Q01955 1670 aa5.44□□□□□ -1.54
PDGFRA-206ENST00000508170 RANBP2P49792 3224 aaKnown RBP5.44□□□□□ -1.54
PDGFRA-206ENST00000508170 IGLV4-3A0A075B6K6 122 aa5.44□□□□□ -1.54
PDGFRA-206ENST00000508170 A6NIN4 97 aa5.44□□□□□ -1.54
PDGFRA-206ENST00000508170 IGKV1-16P04430 117 aa5.44□□□□□ -1.54
PDGFRA-206ENST00000508170 ZC2HC1BQ5TFG8 222 aa5.44□□□□□ -1.54
PDGFRA-206ENST00000508170 GFI1BQ5VTD9 330 aa5.44□□□□□ -1.54
PDGFRA-206ENST00000508170 FAM53AQ6NSI3 398 aaPredicted RBP5.44□□□□□ -1.54
PDGFRA-206ENST00000508170 NOXRED1Q6NXP6 359 aa5.44□□□□□ -1.54
PDGFRA-206ENST00000508170 GUSBP11Q6P575 273 aa5.44□□□□□ -1.54
PDGFRA-206ENST00000508170 Q8N2B8 174 aa5.44□□□□□ -1.54
PDGFRA-206ENST00000508170 NRACQ8N912 160 aa5.44□□□□□ -1.54
PDGFRA-206ENST00000508170 OPRPNQ99935 248 aaPredicted RBP5.44□□□□□ -1.54
PDGFRA-206ENST00000508170 NPCDR1Q9BY65 106 aa5.44□□□□□ -1.54
PDGFRA-206ENST00000508170 C6orf106Q9H6K1 298 aaPredicted RBP5.44□□□□□ -1.54
PDGFRA-206ENST00000508170 DHRS4-AS1Q9P1J3 65 aa5.44□□□□□ -1.54
PDGFRA-206ENST00000508170 ZNF835Q9Y2P0 537 aa5.44□□□□□ -1.54
PDGFRA-206ENST00000508170 IGHV3OR16-10A0A075B7F0 116 aa5.43□□□□□ -1.54
PDGFRA-206ENST00000508170 IGHV3-74A0A0B4J1X5 117 aa5.43□□□□□ -1.54
PDGFRA-206ENST00000508170 RBAKDNA6NC62 111 aa5.43□□□□□ -1.54
PDGFRA-206ENST00000508170 INS-IGF2F8WCM5 200 aa5.43□□□□□ -1.54
PDGFRA-206ENST00000508170 SOD1P00441 154 aa5.43□□□□□ -1.54
PDGFRA-206ENST00000508170 HBDP02042 147 aa5.43□□□□□ -1.54
PDGFRA-206ENST00000508170 CXCL6P80162 114 aa5.43□□□□□ -1.54
PDGFRA-206ENST00000508170 TMEM155Q4W5P6 130 aa5.43□□□□□ -1.54
PDGFRA-206ENST00000508170 LCE2AQ5TA79 106 aaPredicted RBP5.43□□□□□ -1.54
PDGFRA-206ENST00000508170 HEPN1Q6WQI6 88 aa5.43□□□□□ -1.54
PDGFRA-206ENST00000508170 TOMM5Q8N4H5 51 aa5.43□□□□□ -1.54
PDGFRA-206ENST00000508170 C10orf105Q8TEF2 133 aa5.43□□□□□ -1.54
PDGFRA-206ENST00000508170 ITLN1Q8WWA0 313 aa5.43□□□□□ -1.54
PDGFRA-206ENST00000508170 ITLN2Q8WWU7 325 aaPredicted RBP5.43□□□□□ -1.54
PDGFRA-206ENST00000508170 ALPK3Q96L96 1907 aa5.43□□□□□ -1.54
PDGFRA-206ENST00000508170 LY6G6DO95868 133 aa5.43□□□□□ -1.54
PDGFRA-206ENST00000508170 GYPBP06028 91 aa5.43□□□□□ -1.54
PDGFRA-206ENST00000508170 SLC25A4P12235 298 aa5.43□□□□□ -1.54
PDGFRA-206ENST00000508170 ZNF32P17041 273 aa5.43□□□□□ -1.54
PDGFRA-206ENST00000508170 PROK1P58294 105 aa5.43□□□□□ -1.54
PDGFRA-206ENST00000508170 ZNF876PQ49A33 203 aa5.43□□□□□ -1.54
PDGFRA-206ENST00000508170 C12orf73Q69YU5 71 aa5.43□□□□□ -1.54
PDGFRA-206ENST00000508170 CD177Q8N6Q3 437 aa5.43□□□□□ -1.54
PDGFRA-206ENST00000508170 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP5.43□□□□□ -1.54
PDGFRA-206ENST00000508170 S100A16Q96FQ6 103 aaKnown RBP5.43□□□□□ -1.54
PDGFRA-206ENST00000508170 TMEM204Q9BSN7 226 aa5.43□□□□□ -1.54
PDGFRA-206ENST00000508170 LAMA3Q16787 3333 aa5.43□□□□□ -1.54
PDGFRA-206ENST00000508170 PLXNB3Q9ULL4 1909 aa5.42□□□□□ -1.54
PDGFRA-206ENST00000508170 IGKV1-6A0A0C4DH72 117 aa5.42□□□□□ -1.54
PDGFRA-206ENST00000508170 FAM24AA6NFZ4 105 aa5.42□□□□□ -1.54
PDGFRA-206ENST00000508170 SIX6O95475 246 aa5.42□□□□□ -1.54
PDGFRA-206ENST00000508170 INSL4Q14641 139 aa5.42□□□□□ -1.54
PDGFRA-206ENST00000508170 KRTAP27-1Q3LI81 207 aa5.42□□□□□ -1.54
PDGFRA-206ENST00000508170 CASC10Q5T4H9 136 aa5.42□□□□□ -1.54
PDGFRA-206ENST00000508170 FAM168AQ92567 244 aa5.42□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms