RNA–Protein interactions for RNA: ENST00000508070.1

HMGCR-206, Transcript of 3-hydroxy-3-methylglutaryl-CoA reductase, humanhuman

TSL 3

Gene HMGCR, Length 450 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCR-206ENST00000508070 CLVS1Q8IUQ0 354 aaPredicted RBP5.34□□□□□ -1.55
HMGCR-206ENST00000508070 SMIM4Q8WVI0 70 aa5.34□□□□□ -1.55
HMGCR-206ENST00000508070 ZNF331Q9NQX6 463 aaPredicted RBP5.34□□□□□ -1.55
HMGCR-206ENST00000508070 ICOSQ9Y6W8 199 aa5.34□□□□□ -1.55
HMGCR-206ENST00000508070 SRRM2Q9UQ35 2752 aaKnown RBP5.34□□□□□ -1.55
HMGCR-206ENST00000508070 MYCBP2O75592 4640 aa5.34□□□□□ -1.56
HMGCR-206ENST00000508070 TRAV12-3A0A0B4J271 114 aa5.33□□□□□ -1.56
HMGCR-206ENST00000508070 PMS2P5A8MQ11 134 aa5.33□□□□□ -1.56
HMGCR-206ENST00000508070 NPIPB6E9PJ23 425 aa5.33□□□□□ -1.56
HMGCR-206ENST00000508070 WRBO00258 174 aa5.33□□□□□ -1.56
HMGCR-206ENST00000508070 CTDSPLO15194 276 aa5.33□□□□□ -1.56
HMGCR-206ENST00000508070 MRPS12O15235 138 aaKnown RBP5.33□□□□□ -1.56
HMGCR-206ENST00000508070 LEPP41159 167 aa5.33□□□□□ -1.56
HMGCR-206ENST00000508070 VAMP2P63027 116 aa5.33□□□□□ -1.56
HMGCR-206ENST00000508070 MRPL23Q16540 153 aaKnown RBP5.33□□□□□ -1.56
HMGCR-206ENST00000508070 SPANXN5Q5MJ07 72 aa5.33□□□□□ -1.56
HMGCR-206ENST00000508070 LRTM2Q8N967 370 aa5.33□□□□□ -1.56
HMGCR-206ENST00000508070 SYT8Q8NBV8 401 aa5.33□□□□□ -1.56
HMGCR-206ENST00000508070 NTN5Q8WTR8 489 aaPredicted RBP5.33□□□□□ -1.56
HMGCR-206ENST00000508070 ODF3Q96PU9 254 aa5.33□□□□□ -1.56
HMGCR-206ENST00000508070 SLC50A1Q9BRV3 221 aa5.33□□□□□ -1.56
HMGCR-206ENST00000508070 MSRB1Q9NZV6 116 aa5.33□□□□□ -1.56
HMGCR-206ENST00000508070 FUT9Q9Y231 359 aa5.33□□□□□ -1.56
HMGCR-206ENST00000508070 STRAPQ9Y3F4 350 aaKnown RBP5.33□□□□□ -1.56
HMGCR-206ENST00000508070 LY96Q9Y6Y9 160 aa5.33□□□□□ -1.56
HMGCR-206ENST00000508070 ANKRD20A5PA0PJZ0 165 aa5.32□□□□□ -1.56
HMGCR-206ENST00000508070 NOL3O60936 208 aaKnown RBP5.32□□□□□ -1.56
HMGCR-206ENST00000508070 PLA2G1BP04054 148 aaKnown RBP5.32□□□□□ -1.56
HMGCR-206ENST00000508070 LINC00869P0C866 280 aa5.32□□□□□ -1.56
HMGCR-206ENST00000508070 EVI2AP22794 236 aa5.32□□□□□ -1.56
HMGCR-206ENST00000508070 PXDC1Q5TGL8 231 aa5.32□□□□□ -1.56
HMGCR-206ENST00000508070 NEGR1Q7Z3B1 354 aa5.32□□□□□ -1.56
HMGCR-206ENST00000508070 LINC00469Q8N7U9 141 aa5.32□□□□□ -1.56
HMGCR-206ENST00000508070 ZNF680Q8NEM1 530 aa5.32□□□□□ -1.56
HMGCR-206ENST00000508070 ZNF431Q8TF32 576 aaPredicted RBP5.32□□□□□ -1.56
HMGCR-206ENST00000508070 LINC00467Q9BRT7 94 aa5.32□□□□□ -1.56
HMGCR-206ENST00000508070 MIXL1Q9H2W2 232 aa5.32□□□□□ -1.56
HMGCR-206ENST00000508070 NPVFQ9HCQ7 196 aa5.32□□□□□ -1.56
HMGCR-206ENST00000508070 GSN-AS1Q9NRJ2 163 aa5.32□□□□□ -1.56
HMGCR-206ENST00000508070 PRO0255Q9UI72 69 aa5.32□□□□□ -1.56
HMGCR-206ENST00000508070 PXMP4Q9Y6I8 212 aa5.32□□□□□ -1.56
HMGCR-206ENST00000508070 IGLV5-52A0A0A0MRZ9 124 aa5.31□□□□□ -1.56
HMGCR-206ENST00000508070 TRGV1A0A0A0MS02 117 aa5.31□□□□□ -1.56
HMGCR-206ENST00000508070 SMCO3A2RU48 225 aa5.31□□□□□ -1.56
HMGCR-206ENST00000508070 PRAC2D3DTV9 90 aa5.31□□□□□ -1.56
HMGCR-206ENST00000508070 K7EPK0 472 aa5.31□□□□□ -1.56
HMGCR-206ENST00000508070 RGS5O15539 181 aa5.31□□□□□ -1.56
HMGCR-206ENST00000508070 SPINK4O60575 86 aa5.31□□□□□ -1.56
HMGCR-206ENST00000508070 C1QBP02746 253 aa5.31□□□□□ -1.56
HMGCR-206ENST00000508070 SLC25A5P05141 298 aaKnown RBP5.31□□□□□ -1.56
HMGCR-206ENST00000508070 CT45A10P0DMU9 189 aa5.31□□□□□ -1.56
HMGCR-206ENST00000508070 PRB4P10163 310 aaPredicted RBP5.31□□□□□ -1.56
HMGCR-206ENST00000508070 ANXA2RQ3ZCQ2 193 aa5.31□□□□□ -1.56
HMGCR-206ENST00000508070 TMEM128Q5BJH2 165 aa5.31□□□□□ -1.56
HMGCR-206ENST00000508070 PATE2Q6UY27 113 aa5.31□□□□□ -1.56
HMGCR-206ENST00000508070 BPIFA4PQ86YQ2 179 aa5.31□□□□□ -1.56
HMGCR-206ENST00000508070 C11orf72Q8NBR9 251 aa5.31□□□□□ -1.56
HMGCR-206ENST00000508070 DEFB104AQ8WTQ1 72 aa5.31□□□□□ -1.56
HMGCR-206ENST00000508070 ST6GAL2Q96JF0 529 aa5.31□□□□□ -1.56
HMGCR-206ENST00000508070 PARD6GQ9BYG4 376 aaPredicted RBP5.31□□□□□ -1.56
HMGCR-206ENST00000508070 ARL6Q9H0F7 186 aa5.31□□□□□ -1.56
HMGCR-206ENST00000508070 ARV1Q9H2C2 271 aa5.31□□□□□ -1.56
HMGCR-206ENST00000508070 HHLA3Q9XRX5 114 aa5.31□□□□□ -1.56
HMGCR-206ENST00000508070 FNDC10F2Z333 226 aa5.3□□□□□ -1.56
HMGCR-206ENST00000508070 CTDSP2O14595 271 aa5.3□□□□□ -1.56
HMGCR-206ENST00000508070 PRAF2O60831 178 aa5.3□□□□□ -1.56
HMGCR-206ENST00000508070 SCGB1D1O95968 90 aa5.3□□□□□ -1.56
HMGCR-206ENST00000508070 CRYBA4P53673 196 aa5.3□□□□□ -1.56
HMGCR-206ENST00000508070 HAMPP81172 84 aa5.3□□□□□ -1.56
HMGCR-206ENST00000508070 ID3Q02535 119 aa5.3□□□□□ -1.56
HMGCR-206ENST00000508070 CTF1Q16619 201 aa5.3□□□□□ -1.56
HMGCR-206ENST00000508070 C10orf126Q8N4M7 172 aa5.3□□□□□ -1.56
HMGCR-206ENST00000508070 EIF4E3Q8N5X7 224 aaKnown RBP5.3□□□□□ -1.56
HMGCR-206ENST00000508070 ZBTB8BQ8NAP8 495 aaPredicted RBP5.3□□□□□ -1.56
HMGCR-206ENST00000508070 MRPL32Q9BYC8 188 aaKnown RBP5.3□□□□□ -1.56
HMGCR-206ENST00000508070 MCUBQ9NWR8 336 aa5.3□□□□□ -1.56
HMGCR-206ENST00000508070 C7orf71A4D174 169 aa5.29□□□□□ -1.56
HMGCR-206ENST00000508070 LRCOL1A6NCL2 159 aa5.29□□□□□ -1.56
HMGCR-206ENST00000508070 H3BP45 60 aa5.29□□□□□ -1.56
HMGCR-206ENST00000508070 GOSR2O14653 212 aa5.29□□□□□ -1.56
HMGCR-206ENST00000508070 MPDU1O75352 247 aa5.29□□□□□ -1.56
HMGCR-206ENST00000508070 TCL1AP56279 114 aa5.29□□□□□ -1.56
HMGCR-206ENST00000508070 POLR2GP62487 172 aaKnown RBP eCLIP5.29□□□□□ -1.56
HMGCR-206ENST00000508070 IL18Q14116 193 aa5.29□□□□□ -1.56
HMGCR-206ENST00000508070 FHL2Q14192 279 aa5.29□□□□□ -1.56
HMGCR-206ENST00000508070 GUK1Q16774 197 aa5.29□□□□□ -1.56
HMGCR-206ENST00000508070 IBA57Q5T440 356 aaKnown RBP5.29□□□□□ -1.56
HMGCR-206ENST00000508070 TEPPQ6URK8 271 aa5.29□□□□□ -1.56
HMGCR-206ENST00000508070 LINC00305Q7Z4B0 112 aa5.29□□□□□ -1.56
HMGCR-206ENST00000508070 SAT2Q96F10 170 aaPredicted RBP5.29□□□□□ -1.56
HMGCR-206ENST00000508070 DIRAS2Q96HU8 199 aa5.29□□□□□ -1.56
HMGCR-206ENST00000508070 VGLL1Q99990 258 aa5.29□□□□□ -1.56
HMGCR-206ENST00000508070 SPXQ9BT56 116 aa5.29□□□□□ -1.56
HMGCR-206ENST00000508070 PSENENQ9NZ42 101 aa5.29□□□□□ -1.56
HMGCR-206ENST00000508070 RSL24D1Q9UHA3 163 aaKnown RBP5.29□□□□□ -1.56
HMGCR-206ENST00000508070 CHTOPQ9Y3Y2 248 aaKnown RBP5.29□□□□□ -1.56
HMGCR-206ENST00000508070 KLF12Q9Y4X4 402 aa5.29□□□□□ -1.56
HMGCR-206ENST00000508070 KLLNB2CW77 178 aa5.28□□□□□ -1.56
HMGCR-206ENST00000508070 SLC17A3O00476 420 aa5.28□□□□□ -1.56
HMGCR-206ENST00000508070 PSCAO43653 123 aa5.28□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 195 ms