RNA–Protein interactions for RNA: ENST00000506042.5

SQSTM1-210, Transcript of sequestosome 1, humanhuman

TSL 2

Gene SQSTM1, Length 921 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-210ENST00000506042 NDUFB6O95139 128 aa14.62□□□□□ -0.07
SQSTM1-210ENST00000506042 OR4E1P0C645 316 aa14.62□□□□□ -0.07
SQSTM1-210ENST00000506042 DAZ2Q13117 558 aaKnown RBP14.62□□□□□ -0.07
SQSTM1-210ENST00000506042 LINC00612Q8N6U2 182 aa14.62□□□□□ -0.07
SQSTM1-210ENST00000506042 GSKIPQ9P0R6 139 aa14.62□□□□□ -0.07
SQSTM1-210ENST00000506042 SLC25A5P05141 298 aaKnown RBP14.61□□□□□ -0.07
SQSTM1-210ENST00000506042 KRTAP4-5Q9BYR2 181 aa14.61□□□□□ -0.07
SQSTM1-210ENST00000506042 DNAJC4Q9NNZ3 241 aa14.61□□□□□ -0.07
SQSTM1-210ENST00000506042 TRAV12-3A0A0B4J271 114 aa14.6□□□□□ -0.07
SQSTM1-210ENST00000506042 MRPS12O15235 138 aaKnown RBP14.6□□□□□ -0.07
SQSTM1-210ENST00000506042 ZNF253O75346 499 aa14.6□□□□□ -0.07
SQSTM1-210ENST00000506042 PVALBP20472 110 aaPredicted RBP14.6□□□□□ -0.07
SQSTM1-210ENST00000506042 CAMLGP49069 296 aa14.6□□□□□ -0.07
SQSTM1-210ENST00000506042 PATE2Q6UY27 113 aa14.6□□□□□ -0.07
SQSTM1-210ENST00000506042 PRELID1Q9Y255 219 aa14.6□□□□□ -0.07
SQSTM1-210ENST00000506042 DNAH17Q9UFH2 4485 aa14.6□□□□□ -0.07
SQSTM1-210ENST00000506042 BCAP31P51572 246 aa14.59□□□□□ -0.07
SQSTM1-210ENST00000506042 SLAQ13239 276 aa14.59□□□□□ -0.07
SQSTM1-210ENST00000506042 MRPL53Q96EL3 112 aaKnown RBP14.59□□□□□ -0.07
SQSTM1-210ENST00000506042 C20orf85Q9H1P6 137 aa14.59□□□□□ -0.07
SQSTM1-210ENST00000506042 PGPEP1Q9NXJ5 209 aa14.59□□□□□ -0.07
SQSTM1-210ENST00000506042 ZNF586Q9NXT0 402 aa14.59□□□□□ -0.07
SQSTM1-210ENST00000506042 PKD1P98161 4303 aa14.58□□□□□ -0.08
SQSTM1-210ENST00000506042 TRAV9-2A0A087WT02 112 aa14.58□□□□□ -0.08
SQSTM1-210ENST00000506042 J3KRW8 73 aa14.58□□□□□ -0.08
SQSTM1-210ENST00000506042 ERVFC1-1P60608 527 aa14.58□□□□□ -0.08
SQSTM1-210ENST00000506042 ESRGQ1W209 222 aa14.58□□□□□ -0.08
SQSTM1-210ENST00000506042 NFE4Q86UQ8 179 aa14.58□□□□□ -0.08
SQSTM1-210ENST00000506042 NPIPB6E9PJ23 425 aa14.57□□□□□ -0.08
SQSTM1-210ENST00000506042 SIVA1O15304 175 aa14.57□□□□□ -0.08
SQSTM1-210ENST00000506042 IGLC2P0DOY2 106 aa14.57□□□□□ -0.08
SQSTM1-210ENST00000506042 CDPF1Q6NVV7 123 aa14.57□□□□□ -0.08
SQSTM1-210ENST00000506042 C18orf15Q96N68 181 aa14.57□□□□□ -0.08
SQSTM1-210ENST00000506042 TMPRSS5Q9H3S3 457 aa14.57□□□□□ -0.08
SQSTM1-210ENST00000506042 AAMDCQ9H7C9 122 aa14.57□□□□□ -0.08
SQSTM1-210ENST00000506042 ICOSQ9Y6W8 199 aa14.57□□□□□ -0.08
SQSTM1-210ENST00000506042 HOXA5P20719 270 aa14.56□□□□□ -0.08
SQSTM1-210ENST00000506042 CAV2P51636 162 aa14.56□□□□□ -0.08
SQSTM1-210ENST00000506042 OPCMLQ14982 345 aa14.56□□□□□ -0.08
SQSTM1-210ENST00000506042 LINC00477Q96M19 166 aa14.56□□□□□ -0.08
SQSTM1-210ENST00000506042 UQCC1Q9NVA1 299 aa14.56□□□□□ -0.08
SQSTM1-210ENST00000506042 TIMM9Q9Y5J7 89 aa14.56□□□□□ -0.08
SQSTM1-210ENST00000506042 TRGV1A0A0A0MS02 117 aa14.55□□□□□ -0.08
SQSTM1-210ENST00000506042 C7orf71A4D174 169 aa14.55□□□□□ -0.08
SQSTM1-210ENST00000506042 CCNKO75909 580 aa14.55□□□□□ -0.08
SQSTM1-210ENST00000506042 HIST1H1EP10412 219 aaKnown RBP14.55□□□□□ -0.08
SQSTM1-210ENST00000506042 HBG1P69891 147 aa14.55□□□□□ -0.08
SQSTM1-210ENST00000506042 HBG2P69892 147 aa14.55□□□□□ -0.08
SQSTM1-210ENST00000506042 EIF4E3Q8N5X7 224 aaKnown RBP14.55□□□□□ -0.08
SQSTM1-210ENST00000506042 FUT9Q9Y231 359 aa14.55□□□□□ -0.08
SQSTM1-210ENST00000506042 C7orf66A4D0T2 115 aa14.54□□□□□ -0.08
SQSTM1-210ENST00000506042 EPM2AB3EWF7 344 aa14.54□□□□□ -0.08
SQSTM1-210ENST00000506042 SLC17A3O00476 420 aa14.54□□□□□ -0.08
SQSTM1-210ENST00000506042 IFNA5P01569 189 aa14.54□□□□□ -0.08
SQSTM1-210ENST00000506042 SNRPCP09234 159 aaKnown RBP14.54□□□□□ -0.08
SQSTM1-210ENST00000506042 PDE6HQ13956 83 aa14.54□□□□□ -0.08
SQSTM1-210ENST00000506042 Q6ZTI0 123 aa14.54□□□□□ -0.08
SQSTM1-210ENST00000506042 NRARPQ7Z6K4 114 aa14.54□□□□□ -0.08
SQSTM1-210ENST00000506042 STX12Q86Y82 276 aa14.54□□□□□ -0.08
SQSTM1-210ENST00000506042 ZNF431Q8TF32 576 aaPredicted RBP14.54□□□□□ -0.08
SQSTM1-210ENST00000506042 MITD1Q8WV92 249 aa14.54□□□□□ -0.08
SQSTM1-210ENST00000506042 TMEM37Q8WXS4 190 aa14.54□□□□□ -0.08
SQSTM1-210ENST00000506042 MGST2Q99735 147 aa14.54□□□□□ -0.08
SQSTM1-210ENST00000506042 LINC00467Q9BRT7 94 aa14.54□□□□□ -0.08
SQSTM1-210ENST00000506042 PARD6GQ9BYG4 376 aaPredicted RBP14.54□□□□□ -0.08
SQSTM1-210ENST00000506042 RCL1Q9Y2P8 373 aaKnown RBP14.54□□□□□ -0.08
SQSTM1-210ENST00000506042 DNAH11Q96DT5 4516 aa14.54□□□□□ -0.08
SQSTM1-210ENST00000506042 H3BTX0 84 aa14.53□□□□□ -0.08
SQSTM1-210ENST00000506042 K7EP13 123 aa14.53□□□□□ -0.08
SQSTM1-210ENST00000506042 MPDU1O75352 247 aa14.53□□□□□ -0.08
SQSTM1-210ENST00000506042 GPX1P07203 203 aa14.53□□□□□ -0.08
SQSTM1-210ENST00000506042 CT45A10P0DMU9 189 aa14.53□□□□□ -0.08
SQSTM1-210ENST00000506042 ANXA2RQ3ZCQ2 193 aa14.53□□□□□ -0.08
SQSTM1-210ENST00000506042 TMEM78Q5T7P6 136 aa14.53□□□□□ -0.08
SQSTM1-210ENST00000506042 SAT2Q96F10 170 aaPredicted RBP14.53□□□□□ -0.08
SQSTM1-210ENST00000506042 ARPC5LQ9BPX5 153 aa14.53□□□□□ -0.08
SQSTM1-210ENST00000506042 SRRQ9GZT4 340 aa14.53□□□□□ -0.08
SQSTM1-210ENST00000506042 PRAC2D3DTV9 90 aa14.52□□□□□ -0.09
SQSTM1-210ENST00000506042 RGS13O14921 159 aa14.52□□□□□ -0.09
SQSTM1-210ENST00000506042 PAX4O43316 350 aa14.52□□□□□ -0.09
SQSTM1-210ENST00000506042 NMBP08949 121 aa14.52□□□□□ -0.09
SQSTM1-210ENST00000506042 S100A11P31949 105 aa14.52□□□□□ -0.09
SQSTM1-210ENST00000506042 LINC00315P59091 139 aa14.52□□□□□ -0.09
SQSTM1-210ENST00000506042 BAXQ07812 192 aa14.52□□□□□ -0.09
SQSTM1-210ENST00000506042 IBA57Q5T440 356 aaKnown RBP14.52□□□□□ -0.09
SQSTM1-210ENST00000506042 LSM5Q9Y4Y9 91 aaKnown RBP14.52□□□□□ -0.09
SQSTM1-210ENST00000506042 A0A096LPF7 62 aa14.51□□□□□ -0.09
SQSTM1-210ENST00000506042 FAM25EA8MYX2 175 aa14.51□□□□□ -0.09
SQSTM1-210ENST00000506042 H3BQ15 152 aa14.51□□□□□ -0.09
SQSTM1-210ENST00000506042 MBPP02686 304 aaPredicted RBP14.51□□□□□ -0.09
SQSTM1-210ENST00000506042 RPL29P47914 159 aaKnown RBP14.51□□□□□ -0.09
SQSTM1-210ENST00000506042 KIR3DS1Q14943 382 aa14.51□□□□□ -0.09
SQSTM1-210ENST00000506042 KRTAP1-5Q9BYS1 174 aa14.51□□□□□ -0.09
SQSTM1-210ENST00000506042 GSN-AS1Q9NRJ2 163 aa14.51□□□□□ -0.09
SQSTM1-210ENST00000506042 PRO0255Q9UI72 69 aa14.51□□□□□ -0.09
SQSTM1-210ENST00000506042 FLVCR2Q9UPI3 526 aa14.51□□□□□ -0.09
SQSTM1-210ENST00000506042 LINC00854A0A1B0GVQ3 168 aa14.5□□□□□ -0.09
SQSTM1-210ENST00000506042 C5orf51A6NDU8 294 aa14.5□□□□□ -0.09
SQSTM1-210ENST00000506042 MRPL23Q16540 153 aaKnown RBP14.5□□□□□ -0.09
SQSTM1-210ENST00000506042 PCNPQ8WW12 178 aaKnown RBP14.5□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 151.5 ms