RNA–Protein interactions for RNA: ENST00000504289.1

COL1A1-210, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 481 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-210ENST00000504289 ARL3P36405 182 aa7.57□□□□□ -1.2
COL1A1-210ENST00000504289 TCL1AP56279 114 aa7.57□□□□□ -1.2
COL1A1-210ENST00000504289 TPPP2P59282 170 aa7.57□□□□□ -1.2
COL1A1-210ENST00000504289 CFHR3Q02985 330 aa7.57□□□□□ -1.2
COL1A1-210ENST00000504289 KLF5Q13887 457 aaPredicted RBP7.57□□□□□ -1.2
COL1A1-210ENST00000504289 GATD1Q8NB37 220 aa7.57□□□□□ -1.2
COL1A1-210ENST00000504289 NDFIP1Q9BT67 221 aa7.57□□□□□ -1.2
COL1A1-210ENST00000504289 USP9YO00507 2555 aaPredicted RBP7.57□□□□□ -1.2
COL1A1-210ENST00000504289 TRAV8-1A0A0A6YYK1 113 aa7.56□□□□□ -1.2
COL1A1-210ENST00000504289 CHEK1O14757 476 aa7.56□□□□□ -1.2
COL1A1-210ENST00000504289 TGFAP01135 160 aa7.56□□□□□ -1.2
COL1A1-210ENST00000504289 AVPP01185 164 aa7.56□□□□□ -1.2
COL1A1-210ENST00000504289 SNRPCP09234 159 aaKnown RBP7.56□□□□□ -1.2
COL1A1-210ENST00000504289 RAB4BP61018 213 aa7.56□□□□□ -1.2
COL1A1-210ENST00000504289 C9orf152Q5JTZ5 239 aa7.56□□□□□ -1.2
COL1A1-210ENST00000504289 LCN12Q6JVE5 192 aa7.56□□□□□ -1.2
COL1A1-210ENST00000504289 MRPL54Q6P161 138 aaKnown RBP7.56□□□□□ -1.2
COL1A1-210ENST00000504289 LINC00322Q6ZN03 302 aaPredicted RBP7.56□□□□□ -1.2
COL1A1-210ENST00000504289 BAGE3Q86Y29 109 aa7.56□□□□□ -1.2
COL1A1-210ENST00000504289 BCL6BQ8N143 479 aaPredicted RBP7.56□□□□□ -1.2
COL1A1-210ENST00000504289 OR2D3Q8NGH3 330 aa7.56□□□□□ -1.2
COL1A1-210ENST00000504289 ZC2HC1AQ96GY0 325 aa7.56□□□□□ -1.2
COL1A1-210ENST00000504289 MS4A10Q96PG2 267 aa7.56□□□□□ -1.2
COL1A1-210ENST00000504289 GNB4Q9HAV0 340 aa7.56□□□□□ -1.2
COL1A1-210ENST00000504289 LENEPQ9Y5L5 61 aa7.56□□□□□ -1.2
COL1A1-210ENST00000504289 UNC79Q9P2D8 2635 aa7.56□□□□□ -1.2
COL1A1-210ENST00000504289 PRRC2AP48634 2157 aaKnown RBP7.56□□□□□ -1.2
COL1A1-210ENST00000504289 K7EMT4 169 aa7.55□□□□□ -1.2
COL1A1-210ENST00000504289 M0R3E3 92 aa7.55□□□□□ -1.2
COL1A1-210ENST00000504289 CA1P00915 261 aaPredicted RBP7.55□□□□□ -1.2
COL1A1-210ENST00000504289 IGHG4P01861 327 aa7.55□□□□□ -1.2
COL1A1-210ENST00000504289 IGHV4-31P0DP07 118 aa7.55□□□□□ -1.2
COL1A1-210ENST00000504289 RIGQ13278 110 aa7.55□□□□□ -1.2
COL1A1-210ENST00000504289 LY6EQ16553 131 aa7.55□□□□□ -1.2
COL1A1-210ENST00000504289 IQCJQ1A5X6 159 aa7.55□□□□□ -1.2
COL1A1-210ENST00000504289 PDZD11Q5EBL8 140 aa7.55□□□□□ -1.2
COL1A1-210ENST00000504289 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa7.55□□□□□ -1.2
COL1A1-210ENST00000504289 GTSF1Q8WW33 167 aa7.55□□□□□ -1.2
COL1A1-210ENST00000504289 BORCS7Q96B45 105 aa7.55□□□□□ -1.2
COL1A1-210ENST00000504289 PRR25Q96S07 402 aa7.55□□□□□ -1.2
COL1A1-210ENST00000504289 GSN-AS1Q9NRJ2 163 aa7.55□□□□□ -1.2
COL1A1-210ENST00000504289 A0A1B0GUT8 65 aa7.54□□□□□ -1.2
COL1A1-210ENST00000504289 SH2D7A6NKC9 451 aaPredicted RBP7.54□□□□□ -1.2
COL1A1-210ENST00000504289 LINC00587B1AMM8 73 aa7.54□□□□□ -1.2
COL1A1-210ENST00000504289 FOXE3Q13461 319 aa7.54□□□□□ -1.2
COL1A1-210ENST00000504289 DEFB112Q30KQ8 113 aa7.54□□□□□ -1.2
COL1A1-210ENST00000504289 Q6YL49 198 aa7.54□□□□□ -1.2
COL1A1-210ENST00000504289 TMEM256Q8N2U0 113 aa7.54□□□□□ -1.2
COL1A1-210ENST00000504289 GLMPQ8WWB7 406 aa7.54□□□□□ -1.2
COL1A1-210ENST00000504289 NRGNQ92686 78 aa7.54□□□□□ -1.2
COL1A1-210ENST00000504289 SGK494Q96LW2 274 aa7.54□□□□□ -1.2
COL1A1-210ENST00000504289 ASCL2Q99929 193 aa7.54□□□□□ -1.2
COL1A1-210ENST00000504289 VPREB3Q9UKI3 123 aa7.54□□□□□ -1.2
COL1A1-210ENST00000504289 TEX15Q9BXT5 2789 aa7.54□□□□□ -1.2
COL1A1-210ENST00000504289 CREBBPQ92793 2442 aa7.54□□□□□ -1.2
COL1A1-210ENST00000504289 CSPG4Q6UVK1 2322 aa7.53□□□□□ -1.2
COL1A1-210ENST00000504289 TRBV7-9A0A0J9YWB2 115 aa7.53□□□□□ -1.2
COL1A1-210ENST00000504289 A1L4Q6 167 aa7.53□□□□□ -1.2
COL1A1-210ENST00000504289 TMEM189A5PLL7 270 aa7.53□□□□□ -1.2
COL1A1-210ENST00000504289 FABP5P3A8MUU1 101 aa7.53□□□□□ -1.2
COL1A1-210ENST00000504289 SPINK4O60575 86 aa7.53□□□□□ -1.2
COL1A1-210ENST00000504289 SERF1AO75920 110 aa7.53□□□□□ -1.2
COL1A1-210ENST00000504289 APOHP02749 345 aaPredicted RBP7.53□□□□□ -1.2
COL1A1-210ENST00000504289 GZMBP10144 247 aa7.53□□□□□ -1.2
COL1A1-210ENST00000504289 PF4V1P10720 104 aa7.53□□□□□ -1.2
COL1A1-210ENST00000504289 RAB4AP20338 218 aa7.53□□□□□ -1.2
COL1A1-210ENST00000504289 SRIP30626 198 aa7.53□□□□□ -1.2
COL1A1-210ENST00000504289 CRIP1P50238 77 aa7.53□□□□□ -1.2
COL1A1-210ENST00000504289 BLCAPP62952 87 aa7.53□□□□□ -1.2
COL1A1-210ENST00000504289 SLC35B1P78383 322 aa7.53□□□□□ -1.2
COL1A1-210ENST00000504289 FAM106AQ4KMX7 169 aa7.53□□□□□ -1.2
COL1A1-210ENST00000504289 Q5PR19 223 aa7.53□□□□□ -1.2
COL1A1-210ENST00000504289 C9orf47Q6ZRZ4 202 aa7.53□□□□□ -1.2
COL1A1-210ENST00000504289 TCF24Q7RTU0 167 aa7.53□□□□□ -1.2
COL1A1-210ENST00000504289 GPHB5Q86YW7 130 aa7.53□□□□□ -1.2
COL1A1-210ENST00000504289 OR4X2Q8NGF9 303 aa7.53□□□□□ -1.2
COL1A1-210ENST00000504289 NOL4LQ96MY1 436 aaPredicted RBP7.53□□□□□ -1.2
COL1A1-210ENST00000504289 ALKBH7Q9BT30 221 aaPredicted RBP7.53□□□□□ -1.2
COL1A1-210ENST00000504289 NPFFR1Q9GZQ6 430 aa7.53□□□□□ -1.2
COL1A1-210ENST00000504289 TP53TG3Q9ULZ0 132 aa7.53□□□□□ -1.2
COL1A1-210ENST00000504289 NOTCH2Q04721 2471 aa7.53□□□□□ -1.2
COL1A1-210ENST00000504289 GRIFINA4D1Z8 144 aa7.52□□□□□ -1.21
COL1A1-210ENST00000504289 RNF223E7ERA6 249 aa7.52□□□□□ -1.21
COL1A1-210ENST00000504289 GPX1P07203 203 aa7.52□□□□□ -1.21
COL1A1-210ENST00000504289 ELANEP08246 267 aa7.52□□□□□ -1.21
COL1A1-210ENST00000504289 FRMD6-AS1P0C7T7 363 aa7.52□□□□□ -1.21
COL1A1-210ENST00000504289 PMCHP20382 165 aa7.52□□□□□ -1.21
COL1A1-210ENST00000504289 PSMB8P28062 276 aa7.52□□□□□ -1.21
COL1A1-210ENST00000504289 PKIAP61925 76 aa7.52□□□□□ -1.21
COL1A1-210ENST00000504289 HIST1H1AQ02539 215 aaPredicted RBP7.52□□□□□ -1.21
COL1A1-210ENST00000504289 SLAQ13239 276 aa7.52□□□□□ -1.21
COL1A1-210ENST00000504289 ZNF493Q6ZR52 646 aa7.52□□□□□ -1.21
COL1A1-210ENST00000504289 C8orf86Q6ZUL3 223 aa7.52□□□□□ -1.21
COL1A1-210ENST00000504289 TMEM86BQ8N661 226 aa7.52□□□□□ -1.21
COL1A1-210ENST00000504289 SIGLECL1Q8N7X8 197 aa7.52□□□□□ -1.21
COL1A1-210ENST00000504289 C18orf32Q8TCD1 76 aa7.52□□□□□ -1.21
COL1A1-210ENST00000504289 KCNS1Q96KK3 526 aa7.52□□□□□ -1.21
COL1A1-210ENST00000504289 PGLYRP4Q96LB8 373 aa7.52□□□□□ -1.21
COL1A1-210ENST00000504289 DAZ1Q9NQZ3 744 aaKnown RBP7.52□□□□□ -1.21
COL1A1-210ENST00000504289 PEF1Q9UBV8 284 aaKnown RBP7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms