RNA–Protein interactions for RNA: ENST00000502948.1

LSM3P4-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 4, humanhuman

BASIC

Gene LSM3P4, Length 309 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P4-201ENST00000502948 S100A5P33763 92 aa4.21□□□□□ -1.74
LSM3P4-201ENST00000502948 LEPP41159 167 aa4.21□□□□□ -1.74
LSM3P4-201ENST00000502948 FGL1Q08830 312 aa4.21□□□□□ -1.74
LSM3P4-201ENST00000502948 SLAQ13239 276 aa4.21□□□□□ -1.74
LSM3P4-201ENST00000502948 PDE6HQ13956 83 aa4.21□□□□□ -1.74
LSM3P4-201ENST00000502948 VWC2Q2TAL6 325 aa4.21□□□□□ -1.74
LSM3P4-201ENST00000502948 PYDC2Q56P42 97 aa4.21□□□□□ -1.74
LSM3P4-201ENST00000502948 IBA57Q5T440 356 aaKnown RBP4.21□□□□□ -1.74
LSM3P4-201ENST00000502948 GFI1BQ5VTD9 330 aa4.21□□□□□ -1.74
LSM3P4-201ENST00000502948 Q6ZRG5 221 aa4.21□□□□□ -1.74
LSM3P4-201ENST00000502948 Q6ZRN7 208 aaPredicted RBP4.21□□□□□ -1.74
LSM3P4-201ENST00000502948 SPATA12Q7Z6I5 190 aa4.21□□□□□ -1.74
LSM3P4-201ENST00000502948 ZBTB8BQ8NAP8 495 aaPredicted RBP4.21□□□□□ -1.74
LSM3P4-201ENST00000502948 ZNF431Q8TF32 576 aaPredicted RBP4.21□□□□□ -1.74
LSM3P4-201ENST00000502948 MITD1Q8WV92 249 aa4.21□□□□□ -1.74
LSM3P4-201ENST00000502948 TMEM37Q8WXS4 190 aa4.21□□□□□ -1.74
LSM3P4-201ENST00000502948 FAM19A4Q96LR4 140 aa4.21□□□□□ -1.74
LSM3P4-201ENST00000502948 PFDN5Q99471 154 aa4.21□□□□□ -1.74
LSM3P4-201ENST00000502948 KRTAP1-5Q9BYS1 174 aa4.21□□□□□ -1.74
LSM3P4-201ENST00000502948 PRELID1Q9Y255 219 aa4.21□□□□□ -1.74
LSM3P4-201ENST00000502948 A0A096LPF7 62 aa4.2□□□□□ -1.74
LSM3P4-201ENST00000502948 SMCO3A2RU48 225 aa4.2□□□□□ -1.74
LSM3P4-201ENST00000502948 C7orf66A4D0T2 115 aa4.2□□□□□ -1.74
LSM3P4-201ENST00000502948 SSSCA1O60232 199 aa4.2□□□□□ -1.74
LSM3P4-201ENST00000502948 ZNF324O75467 553 aaPredicted RBP4.2□□□□□ -1.74
LSM3P4-201ENST00000502948 METTL15P1P0C7V9 234 aa4.2□□□□□ -1.74
LSM3P4-201ENST00000502948 CRISP2P16562 243 aa4.2□□□□□ -1.74
LSM3P4-201ENST00000502948 RPL29P47914 159 aaKnown RBP4.2□□□□□ -1.74
LSM3P4-201ENST00000502948 OR5I1Q13606 314 aa4.2□□□□□ -1.74
LSM3P4-201ENST00000502948 RAB31Q13636 194 aa4.2□□□□□ -1.74
LSM3P4-201ENST00000502948 C10orf113Q5VZT2 155 aa4.2□□□□□ -1.74
LSM3P4-201ENST00000502948 C9orf47Q6ZRZ4 202 aa4.2□□□□□ -1.74
LSM3P4-201ENST00000502948 NFE4Q86UQ8 179 aa4.2□□□□□ -1.74
LSM3P4-201ENST00000502948 C12orf45Q8N5I9 185 aaPredicted RBP4.2□□□□□ -1.74
LSM3P4-201ENST00000502948 C11orf72Q8NBR9 251 aa4.2□□□□□ -1.74
LSM3P4-201ENST00000502948 OR1L4Q8NGR5 311 aa4.2□□□□□ -1.74
LSM3P4-201ENST00000502948 VSIG2Q96IQ7 327 aa4.2□□□□□ -1.74
LSM3P4-201ENST00000502948 LINC00477Q96M19 166 aa4.2□□□□□ -1.74
LSM3P4-201ENST00000502948 MGST2Q99735 147 aa4.2□□□□□ -1.74
LSM3P4-201ENST00000502948 SRRQ9GZT4 340 aa4.2□□□□□ -1.74
LSM3P4-201ENST00000502948 DNAJC4Q9NNZ3 241 aa4.2□□□□□ -1.74
LSM3P4-201ENST00000502948 SCRT2Q9NQ03 307 aa4.2□□□□□ -1.74
LSM3P4-201ENST00000502948 TMEM14CQ9P0S9 112 aa4.2□□□□□ -1.74
LSM3P4-201ENST00000502948 TP53TG3Q9ULZ0 132 aa4.2□□□□□ -1.74
LSM3P4-201ENST00000502948 RCL1Q9Y2P8 373 aaKnown RBP4.2□□□□□ -1.74
LSM3P4-201ENST00000502948 CENPXA8MT69 81 aa4.19□□□□□ -1.74
LSM3P4-201ENST00000502948 H3BQ15 152 aa4.19□□□□□ -1.74
LSM3P4-201ENST00000502948 SLC17A3O00476 420 aa4.19□□□□□ -1.74
LSM3P4-201ENST00000502948 SIVA1O15304 175 aa4.19□□□□□ -1.74
LSM3P4-201ENST00000502948 COX7A2P2O60397 106 aa4.19□□□□□ -1.74
LSM3P4-201ENST00000502948 SPINK4O60575 86 aa4.19□□□□□ -1.74
LSM3P4-201ENST00000502948 MPDU1O75352 247 aa4.19□□□□□ -1.74
LSM3P4-201ENST00000502948 CT45A10P0DMU9 189 aa4.19□□□□□ -1.74
LSM3P4-201ENST00000502948 HTN1P15515 57 aa4.19□□□□□ -1.74
LSM3P4-201ENST00000502948 CAMLGP49069 296 aa4.19□□□□□ -1.74
LSM3P4-201ENST00000502948 TCL1AP56279 114 aa4.19□□□□□ -1.74
LSM3P4-201ENST00000502948 KRTAP10-2P60368 255 aa4.19□□□□□ -1.74
LSM3P4-201ENST00000502948 RRAS2P62070 204 aaPredicted RBP4.19□□□□□ -1.74
LSM3P4-201ENST00000502948 SLC38A11Q08AI6 406 aa4.19□□□□□ -1.74
LSM3P4-201ENST00000502948 OPCMLQ14982 345 aa4.19□□□□□ -1.74
LSM3P4-201ENST00000502948 IAH1Q2TAA2 248 aaPredicted RBP4.19□□□□□ -1.74
LSM3P4-201ENST00000502948 SPANXN2Q5MJ10 180 aa4.19□□□□□ -1.74
LSM3P4-201ENST00000502948 IQCF2Q8IXL9 164 aa4.19□□□□□ -1.74
LSM3P4-201ENST00000502948 LYPD1Q8N2G4 141 aa4.19□□□□□ -1.74
LSM3P4-201ENST00000502948 EIF4E3Q8N5X7 224 aaKnown RBP4.19□□□□□ -1.74
LSM3P4-201ENST00000502948 ST6GAL2Q96JF0 529 aa4.19□□□□□ -1.74
LSM3P4-201ENST00000502948 C20orf85Q9H1P6 137 aa4.19□□□□□ -1.74
LSM3P4-201ENST00000502948 C11orf1Q9H5F2 150 aa4.19□□□□□ -1.74
LSM3P4-201ENST00000502948 PTTG2Q9NZH5 202 aa4.19□□□□□ -1.74
LSM3P4-201ENST00000502948 WDR83OSQ9Y284 106 aa4.19□□□□□ -1.74
LSM3P4-201ENST00000502948 TRBV19A0A075B6N1 114 aa4.18□□□□□ -1.74
LSM3P4-201ENST00000502948 TRAV9-2A0A087WT02 112 aa4.18□□□□□ -1.74
LSM3P4-201ENST00000502948 TRAV12-3A0A0B4J271 114 aa4.18□□□□□ -1.74
LSM3P4-201ENST00000502948 GAGE12BA1L429 117 aa4.18□□□□□ -1.74
LSM3P4-201ENST00000502948 C7orf71A4D174 169 aa4.18□□□□□ -1.74
LSM3P4-201ENST00000502948 EPM2AB3EWF7 344 aa4.18□□□□□ -1.74
LSM3P4-201ENST00000502948 PRAC2D3DTV9 90 aa4.18□□□□□ -1.74
LSM3P4-201ENST00000502948 EREGO14944 169 aa4.18□□□□□ -1.74
LSM3P4-201ENST00000502948 CCNKO75909 580 aa4.18□□□□□ -1.74
LSM3P4-201ENST00000502948 GAGE7O76087 117 aa4.18□□□□□ -1.74
LSM3P4-201ENST00000502948 MBPP02686 304 aaPredicted RBP4.18□□□□□ -1.74
LSM3P4-201ENST00000502948 GAGE12FP0CL80 117 aa4.18□□□□□ -1.74
LSM3P4-201ENST00000502948 GAGE12GP0CL81 117 aa4.18□□□□□ -1.74
LSM3P4-201ENST00000502948 GAGE12IP0CL82 117 aa4.18□□□□□ -1.74
LSM3P4-201ENST00000502948 HIST1H1EP10412 219 aaKnown RBP4.18□□□□□ -1.74
LSM3P4-201ENST00000502948 S100A11P31949 105 aa4.18□□□□□ -1.74
LSM3P4-201ENST00000502948 BTCP35070 178 aa4.18□□□□□ -1.74
LSM3P4-201ENST00000502948 LINC00315P59091 139 aa4.18□□□□□ -1.74
LSM3P4-201ENST00000502948 ARL16Q0P5N6 197 aa4.18□□□□□ -1.74
LSM3P4-201ENST00000502948 KIR3DS1Q14943 382 aa4.18□□□□□ -1.74
LSM3P4-201ENST00000502948 ATP6V1FQ16864 119 aa4.18□□□□□ -1.74
LSM3P4-201ENST00000502948 Q6ZTI0 123 aa4.18□□□□□ -1.74
LSM3P4-201ENST00000502948 VGLL1Q99990 258 aa4.18□□□□□ -1.74
LSM3P4-201ENST00000502948 TMPRSS5Q9H3S3 457 aa4.18□□□□□ -1.74
LSM3P4-201ENST00000502948 ZNF586Q9NXT0 402 aa4.18□□□□□ -1.74
LSM3P4-201ENST00000502948 PRO0255Q9UI72 69 aa4.18□□□□□ -1.74
LSM3P4-201ENST00000502948 TRGV2A0A075B6R0 118 aa4.17□□□□□ -1.74
LSM3P4-201ENST00000502948 A0A0J9YY99 117 aa4.17□□□□□ -1.74
LSM3P4-201ENST00000502948 LINC00854A0A1B0GVQ3 168 aa4.17□□□□□ -1.74
LSM3P4-201ENST00000502948 RBAKDNA6NC62 111 aa4.17□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms