RNA–Protein interactions for RNA: ENST00000498043.6

CHRNA4-206, Transcript of cholinergic receptor nicotinic alpha 4 subunit, humanhuman

TSL 5

Gene CHRNA4, Length 2,052 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA4-206ENST00000498043 HIVEP2P31629 2446 aa13.57□□□□□ -0.24
CHRNA4-206ENST00000498043 TRBV24-1A0A075B6N3 115 aa13.57□□□□□ -0.24
CHRNA4-206ENST00000498043 CHEK1O14757 476 aa13.57□□□□□ -0.24
CHRNA4-206ENST00000498043 FLI1Q01543 452 aaPredicted RBP13.57□□□□□ -0.24
CHRNA4-206ENST00000498043 PSG3Q16557 428 aa13.57□□□□□ -0.24
CHRNA4-206ENST00000498043 DEFB136Q30KP8 78 aa13.57□□□□□ -0.24
CHRNA4-206ENST00000498043 TCTEX1D4Q5JR98 221 aa13.57□□□□□ -0.24
CHRNA4-206ENST00000498043 SLC50A1Q9BRV3 221 aa13.57□□□□□ -0.24
CHRNA4-206ENST00000498043 MLST8Q9BVC4 326 aa13.57□□□□□ -0.24
CHRNA4-206ENST00000498043 OSTCQ9NRP0 149 aa13.57□□□□□ -0.24
CHRNA4-206ENST00000498043 A0A1W2PS18 150 aa13.56□□□□□ -0.24
CHRNA4-206ENST00000498043 HILS1P60008 231 aa13.56□□□□□ -0.24
CHRNA4-206ENST00000498043 SMIM12Q96EX1 92 aa13.56□□□□□ -0.24
CHRNA4-206ENST00000498043 RHPN1-AS1Q9BWJ2 59 aa13.56□□□□□ -0.24
CHRNA4-206ENST00000498043 PSG8Q9UQ74 426 aa13.55□□□□□ -0.24
CHRNA4-206ENST00000498043 HOXD3P31249 432 aaPredicted RBP13.55□□□□□ -0.24
CHRNA4-206ENST00000498043 SYNJ2BPP57105 145 aa13.55□□□□□ -0.24
CHRNA4-206ENST00000498043 IL36BQ9NZH7 164 aa13.55□□□□□ -0.24
CHRNA4-206ENST00000498043 UFC1Q9Y3C8 167 aa13.55□□□□□ -0.24
CHRNA4-206ENST00000498043 TRAV8-2A0A0B4J237 113 aa13.54□□□□□ -0.24
CHRNA4-206ENST00000498043 ZNF705GA8MUZ8 300 aaPredicted RBP13.54□□□□□ -0.24
CHRNA4-206ENST00000498043 CA1P00915 261 aaPredicted RBP13.54□□□□□ -0.24
CHRNA4-206ENST00000498043 MEOX2P50222 304 aa13.54□□□□□ -0.24
CHRNA4-206ENST00000498043 RPL11P62913 178 aaKnown RBP13.54□□□□□ -0.24
CHRNA4-206ENST00000498043 IMMP2LQ96T52 175 aa13.54□□□□□ -0.24
CHRNA4-206ENST00000498043 IGKV3-7A0A075B6H7 116 aa13.54□□□□□ -0.24
CHRNA4-206ENST00000498043 TRBV6-1A0A0K0K1D8 114 aa13.54□□□□□ -0.24
CHRNA4-206ENST00000498043 C1orf196B1AJZ1 125 aa13.54□□□□□ -0.24
CHRNA4-206ENST00000498043 INAFM1C9JVW0 142 aa13.54□□□□□ -0.24
CHRNA4-206ENST00000498043 K7EMT4 169 aa13.54□□□□□ -0.24
CHRNA4-206ENST00000498043 LCN12Q6JVE5 192 aa13.54□□□□□ -0.24
CHRNA4-206ENST00000498043 LINC00322Q6ZN03 302 aaPredicted RBP13.54□□□□□ -0.24
CHRNA4-206ENST00000498043 TMEM183AQ8IXX5 376 aa13.54□□□□□ -0.24
CHRNA4-206ENST00000498043 PYGO2Q9BRQ0 406 aa13.54□□□□□ -0.24
CHRNA4-206ENST00000498043 SMPXQ9UHP9 88 aa13.54□□□□□ -0.24
CHRNA4-206ENST00000498043 SERTM2A0A1B0GWG4 89 aa13.53□□□□□ -0.24
CHRNA4-206ENST00000498043 TMEM213A2RRL7 107 aa13.53□□□□□ -0.24
CHRNA4-206ENST00000498043 FAM231DQ6ZW35 169 aa13.53□□□□□ -0.24
CHRNA4-206ENST00000498043 C16orf92Q96LL3 132 aa13.53□□□□□ -0.24
CHRNA4-206ENST00000498043 PRAC2D3DTV9 90 aa13.52□□□□□ -0.24
CHRNA4-206ENST00000498043 CDX1P47902 265 aaPredicted RBP13.52□□□□□ -0.24
CHRNA4-206ENST00000498043 TCL1AP56279 114 aa13.52□□□□□ -0.24
CHRNA4-206ENST00000498043 FOXL1Q12952 345 aa13.52□□□□□ -0.24
CHRNA4-206ENST00000498043 C11orf44Q8N8P7 122 aa13.52□□□□□ -0.24
CHRNA4-206ENST00000498043 NUDT10Q8NFP7 164 aa13.52□□□□□ -0.24
CHRNA4-206ENST00000498043 Q8TAT8 98 aa13.52□□□□□ -0.24
CHRNA4-206ENST00000498043 NUDT11Q96G61 164 aa13.52□□□□□ -0.24
CHRNA4-206ENST00000498043 VGLL1Q99990 258 aa13.52□□□□□ -0.24
CHRNA4-206ENST00000498043 RAB5BP61020 215 aa13.52□□□□□ -0.25
CHRNA4-206ENST00000498043 ARL6IP6Q8N6S5 226 aa13.52□□□□□ -0.25
CHRNA4-206ENST00000498043 KLHL30-AS1Q8NEE0 82 aa13.52□□□□□ -0.25
CHRNA4-206ENST00000498043 C4orf3Q8WVX3 66 aa13.52□□□□□ -0.25
CHRNA4-206ENST00000498043 ZC2HC1AQ96GY0 325 aa13.52□□□□□ -0.25
CHRNA4-206ENST00000498043 DUX3Q96PT4 197 aa13.52□□□□□ -0.25
CHRNA4-206ENST00000498043 GATCO43716 136 aaKnown RBP13.51□□□□□ -0.25
CHRNA4-206ENST00000498043 SLURP1P55000 103 aa13.51□□□□□ -0.25
CHRNA4-206ENST00000498043 REC114Q7Z4M0 266 aa13.51□□□□□ -0.25
CHRNA4-206ENST00000498043 C8orf49Q96NF6 230 aa13.51□□□□□ -0.25
CHRNA4-206ENST00000498043 ZFP30Q9Y2G7 519 aa13.51□□□□□ -0.25
CHRNA4-206ENST00000498043 A8MWP6 167 aa13.51□□□□□ -0.25
CHRNA4-206ENST00000498043 GBGT1Q8N5D6 347 aa13.51□□□□□ -0.25
CHRNA4-206ENST00000498043 LINC01006Q8NI28 216 aa13.51□□□□□ -0.25
CHRNA4-206ENST00000498043 WIPF2Q8TF74 440 aaPredicted RBP13.51□□□□□ -0.25
CHRNA4-206ENST00000498043 NRN1Q9NPD7 142 aa13.51□□□□□ -0.25
CHRNA4-206ENST00000498043 HIVEP1P15822 2718 aa13.5□□□□□ -0.25
CHRNA4-206ENST00000498043 TRGC2P03986 189 aa13.5□□□□□ -0.25
CHRNA4-206ENST00000498043 ERCC8Q13216 396 aa13.5□□□□□ -0.25
CHRNA4-206ENST00000498043 OR11H1Q8NG94 326 aa13.5□□□□□ -0.25
CHRNA4-206ENST00000498043 BIN3Q9NQY0 253 aa13.5□□□□□ -0.25
CHRNA4-206ENST00000498043 SOCS3O14543 225 aa13.49□□□□□ -0.25
CHRNA4-206ENST00000498043 TCF24Q7RTU0 167 aa13.49□□□□□ -0.25
CHRNA4-206ENST00000498043 C20orf173Q96LM9 149 aa13.49□□□□□ -0.25
CHRNA4-206ENST00000498043 ZNF492Q9P255 531 aa13.49□□□□□ -0.25
CHRNA4-206ENST00000498043 LOC105371267A0A1B0GV96 52 aa13.49□□□□□ -0.25
CHRNA4-206ENST00000498043 C19orf71A6NCJ1 209 aa13.49□□□□□ -0.25
CHRNA4-206ENST00000498043 LINC01619G3V211 115 aa13.49□□□□□ -0.25
CHRNA4-206ENST00000498043 HAX1O00165 279 aa13.49□□□□□ -0.25
CHRNA4-206ENST00000498043 LGALS9O00182 355 aa13.49□□□□□ -0.25
CHRNA4-206ENST00000498043 P01737 135 aa13.49□□□□□ -0.25
CHRNA4-206ENST00000498043 C16orf95Q9H693 158 aa13.49□□□□□ -0.25
CHRNA4-206ENST00000498043 SRD5A3Q9H8P0 318 aa13.49□□□□□ -0.25
CHRNA4-206ENST00000498043 NSD1Q96L73 2696 aaPredicted RBP13.48□□□□□ -0.25
CHRNA4-206ENST00000498043 A0A1W2PRX2 142 aa13.48□□□□□ -0.25
CHRNA4-206ENST00000498043 CD28P10747 220 aa13.48□□□□□ -0.25
CHRNA4-206ENST00000498043 BMI1P35226 326 aa13.48□□□□□ -0.25
CHRNA4-206ENST00000498043 ZNF738Q8NE65 137 aa13.48□□□□□ -0.25
CHRNA4-206ENST00000498043 MRPL53Q96EL3 112 aaKnown RBP13.48□□□□□ -0.25
CHRNA4-206ENST00000498043 DAZAP1Q96EP5 407 aaKnown RBP13.48□□□□□ -0.25
CHRNA4-206ENST00000498043 JMJD8Q96S16 334 aa13.48□□□□□ -0.25
CHRNA4-206ENST00000498043 GPR61Q9BZJ8 451 aa13.48□□□□□ -0.25
CHRNA4-206ENST00000498043 RPP21Q9H633 154 aaKnown RBP13.48□□□□□ -0.25
CHRNA4-206ENST00000498043 SMIM27A0A1W2PRY6 76 aa13.48□□□□□ -0.25
CHRNA4-206ENST00000498043 TYMSP04818 313 aa13.48□□□□□ -0.25
CHRNA4-206ENST00000498043 KLF5Q13887 457 aaPredicted RBP13.48□□□□□ -0.25
CHRNA4-206ENST00000498043 DPF1Q92782 380 aa13.48□□□□□ -0.25
CHRNA4-206ENST00000498043 SPINK4O60575 86 aa13.47□□□□□ -0.25
CHRNA4-206ENST00000498043 SRSF2Q01130 221 aaKnown RBP13.47□□□□□ -0.25
CHRNA4-206ENST00000498043 OR1N2Q8NGR9 330 aa13.47□□□□□ -0.25
CHRNA4-206ENST00000498043 PRR25Q96S07 402 aa13.47□□□□□ -0.25
CHRNA4-206ENST00000498043 C2orf70A6NJV1 201 aa13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms