RNA–Protein interactions for RNA: ENST00000497488.1

BRCA1-224, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 779 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-224ENST00000497488 ZNF767PQ75MW2 155 aa3.81□□□□□ -1.8
BRCA1-224ENST00000497488 TERB2Q8NHR7 220 aa3.81□□□□□ -1.8
BRCA1-224ENST00000497488 MUC7Q8TAX7 377 aa3.81□□□□□ -1.8
BRCA1-224ENST00000497488 COX14Q96I36 57 aa3.81□□□□□ -1.8
BRCA1-224ENST00000497488 RPL26L1Q9UNX3 145 aaKnown RBP3.81□□□□□ -1.8
BRCA1-224ENST00000497488 TRPM6Q9BX84 2022 aa3.81□□□□□ -1.8
BRCA1-224ENST00000497488 AKAP13Q12802 2813 aa3.8□□□□□ -1.8
BRCA1-224ENST00000497488 CELSR3Q9NYQ7 3312 aa3.8□□□□□ -1.8
BRCA1-224ENST00000497488 SCN8AQ9UQD0 1980 aa3.8□□□□□ -1.8
BRCA1-224ENST00000497488 IGHV3-73A0A0B4J1V6 119 aa3.8□□□□□ -1.8
BRCA1-224ENST00000497488 TRAV5A0A0B4J249 113 aa3.8□□□□□ -1.8
BRCA1-224ENST00000497488 A0A1B0GW64 132 aa3.8□□□□□ -1.8
BRCA1-224ENST00000497488 F8W036 122 aa3.8□□□□□ -1.8
BRCA1-224ENST00000497488 CCL22O00626 93 aa3.8□□□□□ -1.8
BRCA1-224ENST00000497488 DLEU1O43261 78 aa3.8□□□□□ -1.8
BRCA1-224ENST00000497488 OR2T1O43869 369 aa3.8□□□□□ -1.8
BRCA1-224ENST00000497488 OR2H2O95918 312 aa3.8□□□□□ -1.8
BRCA1-224ENST00000497488 DSCR10P59022 87 aa3.8□□□□□ -1.8
BRCA1-224ENST00000497488 YPEL3P61236 119 aaPredicted RBP3.8□□□□□ -1.8
BRCA1-224ENST00000497488 HIST1H1AQ02539 215 aaPredicted RBP3.8□□□□□ -1.8
BRCA1-224ENST00000497488 GKN2Q86XP6 184 aa3.8□□□□□ -1.8
BRCA1-224ENST00000497488 C10orf126Q8N4M7 172 aa3.8□□□□□ -1.8
BRCA1-224ENST00000497488 APCDD1LQ8NCL9 501 aa3.8□□□□□ -1.8
BRCA1-224ENST00000497488 KLF14Q8TD94 323 aaPredicted RBP3.8□□□□□ -1.8
BRCA1-224ENST00000497488 KRTAP9-8Q9BYQ0 159 aa3.8□□□□□ -1.8
BRCA1-224ENST00000497488 DSCAMO60469 2012 aa3.8□□□□□ -1.8
BRCA1-224ENST00000497488 PTPRBP23467 1997 aa3.8□□□□□ -1.8
BRCA1-224ENST00000497488 CFAP47Q6ZTR5 3102 aa3.79□□□□□ -1.8
BRCA1-224ENST00000497488 IGKV1-9A0A0C4DH69 117 aa3.79□□□□□ -1.8
BRCA1-224ENST00000497488 IRGMA1A4Y4 181 aa3.79□□□□□ -1.8
BRCA1-224ENST00000497488 C16orf90A8MZG2 172 aa3.79□□□□□ -1.8
BRCA1-224ENST00000497488 C19orf84I3L1E1 186 aa3.79□□□□□ -1.8
BRCA1-224ENST00000497488 SMIM24O75264 130 aa3.79□□□□□ -1.8
BRCA1-224ENST00000497488 WISP3O95389 354 aaPredicted RBP3.79□□□□□ -1.8
BRCA1-224ENST00000497488 NPYP01303 97 aa3.79□□□□□ -1.8
BRCA1-224ENST00000497488 IGKV3-15P01624 115 aa3.79□□□□□ -1.8
BRCA1-224ENST00000497488 IGHV3-53P01767 116 aa3.79□□□□□ -1.8
BRCA1-224ENST00000497488 TMEM69Q5SWH9 247 aa3.79□□□□□ -1.8
BRCA1-224ENST00000497488 LCE1AQ5T7P2 110 aa3.79□□□□□ -1.8
BRCA1-224ENST00000497488 BCL2L15Q5TBC7 163 aa3.79□□□□□ -1.8
BRCA1-224ENST00000497488 TRAPPC6BQ86SZ2 158 aa3.79□□□□□ -1.8
BRCA1-224ENST00000497488 TCTE3Q8IZS6 198 aa3.79□□□□□ -1.8
BRCA1-224ENST00000497488 OR8D4Q8NGM9 314 aa3.79□□□□□ -1.8
BRCA1-224ENST00000497488 SMCR5Q8TEV8 140 aa3.79□□□□□ -1.8
BRCA1-224ENST00000497488 NAT8BQ9UHF3 227 aa3.79□□□□□ -1.8
BRCA1-224ENST00000497488 ZNF443Q9Y2A4 671 aaPredicted RBP3.79□□□□□ -1.8
BRCA1-224ENST00000497488 MYLKQ15746 1914 aa3.79□□□□□ -1.8
BRCA1-224ENST00000497488 DMXL2Q8TDJ6 3036 aa3.78□□□□□ -1.8
BRCA1-224ENST00000497488 SPTBN2O15020 2390 aa3.78□□□□□ -1.8
BRCA1-224ENST00000497488 ZZEF1O43149 2961 aa3.78□□□□□ -1.8
BRCA1-224ENST00000497488 OR51F1A6NGY5 319 aa3.78□□□□□ -1.8
BRCA1-224ENST00000497488 PCNX2A6NKB5 2137 aa3.78□□□□□ -1.8
BRCA1-224ENST00000497488 TMEM212A6NML5 194 aa3.78□□□□□ -1.8
BRCA1-224ENST00000497488 TPST1O60507 370 aa3.78□□□□□ -1.8
BRCA1-224ENST00000497488 PGLYRP1O75594 196 aaPredicted RBP3.78□□□□□ -1.8
BRCA1-224ENST00000497488 IGHV3-7P01780 117 aa3.78□□□□□ -1.8
BRCA1-224ENST00000497488 EVI2AP22794 236 aa3.78□□□□□ -1.8
BRCA1-224ENST00000497488 RPL22P35268 128 aaKnown RBP3.78□□□□□ -1.8
BRCA1-224ENST00000497488 SRP14P37108 136 aaKnown RBP3.78□□□□□ -1.8
BRCA1-224ENST00000497488 EIF5AP63241 154 aaKnown RBP3.78□□□□□ -1.8
BRCA1-224ENST00000497488 MIAQ16674 131 aa3.78□□□□□ -1.8
BRCA1-224ENST00000497488 ZNF705AQ6ZN79 300 aaPredicted RBP3.78□□□□□ -1.8
BRCA1-224ENST00000497488 BPIFA4PQ86YQ2 179 aa3.78□□□□□ -1.8
BRCA1-224ENST00000497488 ZC2HC1AQ96GY0 325 aa3.78□□□□□ -1.8
BRCA1-224ENST00000497488 LOC400499M0QZD8 3231 aa3.78□□□□□ -1.81
BRCA1-224ENST00000497488 ZNF106Q9H2Y7 1883 aaKnown RBP3.77□□□□□ -1.81
BRCA1-224ENST00000497488 KNL1Q8NG31 2342 aa3.77□□□□□ -1.81
BRCA1-224ENST00000497488 MEIKINA0A087WXM9 373 aa3.77□□□□□ -1.81
BRCA1-224ENST00000497488 MDFIC2A0A1B0GVS7 189 aa3.77□□□□□ -1.81
BRCA1-224ENST00000497488 J3QQQ9 107 aa3.77□□□□□ -1.81
BRCA1-224ENST00000497488 TMEM256-PLSCR3K7ERE1 68 aa3.77□□□□□ -1.81
BRCA1-224ENST00000497488 TXNDC9O14530 226 aa3.77□□□□□ -1.81
BRCA1-224ENST00000497488 GGCTO75223 188 aaKnown RBP3.77□□□□□ -1.81
BRCA1-224ENST00000497488 LYZL6O75951 148 aa3.77□□□□□ -1.81
BRCA1-224ENST00000497488 CDS2O95674 445 aa3.77□□□□□ -1.81
BRCA1-224ENST00000497488 IGKV1-16P04430 117 aa3.77□□□□□ -1.81
BRCA1-224ENST00000497488 P0DMU3 169 aa3.77□□□□□ -1.81
BRCA1-224ENST00000497488 FAM231AP0DMU4 169 aa3.77□□□□□ -1.81
BRCA1-224ENST00000497488 FAM231CP0DMU5 169 aa3.77□□□□□ -1.81
BRCA1-224ENST00000497488 LGALS3P17931 250 aaKnown RBP3.77□□□□□ -1.81
BRCA1-224ENST00000497488 FOXA1P55317 472 aa3.77□□□□□ -1.81
BRCA1-224ENST00000497488 KISS1Q15726 138 aa3.77□□□□□ -1.81
BRCA1-224ENST00000497488 WHAMMP3Q1A5X7 153 aa3.77□□□□□ -1.81
BRCA1-224ENST00000497488 FAM229BQ4G0N7 80 aa3.77□□□□□ -1.81
BRCA1-224ENST00000497488 CHCHD2P9Q5T1J5 151 aaPredicted RBP3.77□□□□□ -1.81
BRCA1-224ENST00000497488 Q5XG85 94 aa3.77□□□□□ -1.81
BRCA1-224ENST00000497488 OR2T10Q8NGZ9 312 aa3.77□□□□□ -1.81
BRCA1-224ENST00000497488 SMIM3Q9BZL3 60 aa3.77□□□□□ -1.81
BRCA1-224ENST00000497488 CALML5Q9NZT1 146 aa3.77□□□□□ -1.81
BRCA1-224ENST00000497488 RNF11Q9Y3C5 154 aa3.77□□□□□ -1.81
BRCA1-224ENST00000497488 S4R3C0 116 aa3.77□□□□□ -1.81
BRCA1-224ENST00000497488 CNOT1A5YKK6 2376 aaKnown RBP3.77□□□□□ -1.81
BRCA1-224ENST00000497488 NUP214P35658 2090 aaPredicted RBP3.77□□□□□ -1.81
BRCA1-224ENST00000497488 CABIN1Q9Y6J0 2220 aa3.76□□□□□ -1.81
BRCA1-224ENST00000497488 IGLV3-16A0A075B6K0 115 aa3.76□□□□□ -1.81
BRCA1-224ENST00000497488 IGHV3-15A0A0B4J1V0 119 aa3.76□□□□□ -1.81
BRCA1-224ENST00000497488 IGKV3D-20A0A0C4DH25 116 aa3.76□□□□□ -1.81
BRCA1-224ENST00000497488 ODAMA1E959 279 aa3.76□□□□□ -1.81
BRCA1-224ENST00000497488 C17orf98A8MV24 154 aa3.76□□□□□ -1.81
BRCA1-224ENST00000497488 UBFD1O14562 309 aaKnown RBP3.76□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 91.3 ms