RNA–Protein interactions for RNA: ENST00000497171.1

PHC3-216, Transcript of polyhomeotic homolog 3, humanhuman

TSL 2

Gene PHC3, Length 420 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHC3-216ENST00000497171 KPNA4O00629 521 aaPredicted RBP0.72□□□□□ -2.29
PHC3-216ENST00000497171 SNRNP200O75643 2136 aaKnown RBP0.72□□□□□ -2.29
PHC3-216ENST00000497171 DIAPH2-AS1Q14236 149 aa0.72□□□□□ -2.29
PHC3-216ENST00000497171 STX12Q86Y82 276 aa0.72□□□□□ -2.29
PHC3-216ENST00000497171 SBSPONQ8IVN8 264 aa0.72□□□□□ -2.29
PHC3-216ENST00000497171 BOLA2Q9H3K6 86 aa0.72□□□□□ -2.29
PHC3-216ENST00000497171 OTORQ9NRC9 128 aa0.72□□□□□ -2.29
PHC3-216ENST00000497171 NAT8BQ9UHF3 227 aa0.72□□□□□ -2.29
PHC3-216ENST00000497171 NUBP2Q9Y5Y2 271 aa0.72□□□□□ -2.29
PHC3-216ENST00000497171 V9GYQ6 96 aa0.72□□□□□ -2.29
PHC3-216ENST00000497171 YTHDC2Q9H6S0 1430 aaKnown RBP0.72□□□□□ -2.29
PHC3-216ENST00000497171 ROCK1Q13464 1354 aa0.71□□□□□ -2.3
PHC3-216ENST00000497171 PHRF1Q9P1Y6 1649 aaKnown RBP0.71□□□□□ -2.3
PHC3-216ENST00000497171 CHD3Q12873 2000 aaKnown RBP0.71□□□□□ -2.3
PHC3-216ENST00000497171 MIR22HGQ0VDD5 57 aa0.71□□□□□ -2.3
PHC3-216ENST00000497171 LINC00575Q6W349 94 aa0.71□□□□□ -2.3
PHC3-216ENST00000497171 PHF5AQ7RTV0 110 aaKnown RBP0.71□□□□□ -2.3
PHC3-216ENST00000497171 PRR15Q8IV56 129 aa0.71□□□□□ -2.3
PHC3-216ENST00000497171 ISOC1Q96CN7 298 aa0.71□□□□□ -2.3
PHC3-216ENST00000497171 OR4C12Q96R67 309 aa0.71□□□□□ -2.3
PHC3-216ENST00000497171 CCDC32Q9BV29 185 aa0.71□□□□□ -2.3
PHC3-216ENST00000497171 CST11Q9H112 138 aa0.71□□□□□ -2.3
PHC3-216ENST00000497171 COL24A1Q17RW2 1714 aa0.71□□□□□ -2.3
PHC3-216ENST00000497171 MYH3P11055 1940 aa0.71□□□□□ -2.3
PHC3-216ENST00000497171 TECPR2O15040 1411 aa0.71□□□□□ -2.3
PHC3-216ENST00000497171 PIK3C2AO00443 1686 aa0.7□□□□□ -2.3
PHC3-216ENST00000497171 TRDV1A0A1B0GX56 115 aa0.7□□□□□ -2.3
PHC3-216ENST00000497171 NUPR2A6NF83 97 aa0.7□□□□□ -2.3
PHC3-216ENST00000497171 GABARAPH6UMI1 98 aa0.7□□□□□ -2.3
PHC3-216ENST00000497171 CD14P08571 375 aa0.7□□□□□ -2.3
PHC3-216ENST00000497171 FABP4P15090 132 aa0.7□□□□□ -2.3
PHC3-216ENST00000497171 S100A11P31949 105 aa0.7□□□□□ -2.3
PHC3-216ENST00000497171 S100A5P33763 92 aa0.7□□□□□ -2.3
PHC3-216ENST00000497171 SDC2P34741 201 aa0.7□□□□□ -2.3
PHC3-216ENST00000497171 NDUFA6P56556 154 aa0.7□□□□□ -2.3
PHC3-216ENST00000497171 MRPS36P82909 103 aaKnown RBP0.7□□□□□ -2.3
PHC3-216ENST00000497171 FOXI2Q6ZQN5 318 aa0.7□□□□□ -2.3
PHC3-216ENST00000497171 OR4B1Q8NGF8 309 aa0.7□□□□□ -2.3
PHC3-216ENST00000497171 OR5H6Q8NGV6 325 aa0.7□□□□□ -2.3
PHC3-216ENST00000497171 MCEEQ96PE7 176 aa0.7□□□□□ -2.3
PHC3-216ENST00000497171 EFCAB11Q9BUY7 163 aa0.7□□□□□ -2.3
PHC3-216ENST00000497171 IL20Q9NYY1 176 aa0.7□□□□□ -2.3
PHC3-216ENST00000497171 HSPB8Q9UJY1 196 aa0.7□□□□□ -2.3
PHC3-216ENST00000497171 LAMTOR2Q9Y2Q5 125 aa0.7□□□□□ -2.3
PHC3-216ENST00000497171 TRPM1Q7Z4N2 1603 aa0.7□□□□□ -2.3
PHC3-216ENST00000497171 RFX7Q2KHR2 1363 aa0.7□□□□□ -2.3
PHC3-216ENST00000497171 RTL9Q8NET4 1388 aa0.7□□□□□ -2.3
PHC3-216ENST00000497171 FABP1P07148 127 aa0.69□□□□□ -2.3
PHC3-216ENST00000497171 PRB4P10163 310 aaPredicted RBP0.69□□□□□ -2.3
PHC3-216ENST00000497171 BCL2P10415 239 aa0.69□□□□□ -2.3
PHC3-216ENST00000497171 NEDD8Q15843 81 aa0.69□□□□□ -2.3
PHC3-216ENST00000497171 OCIAD2Q56VL3 154 aa0.69□□□□□ -2.3
PHC3-216ENST00000497171 OR10AC1Q8NH08 325 aa0.69□□□□□ -2.3
PHC3-216ENST00000497171 GRPEL2Q8TAA5 225 aa0.69□□□□□ -2.3
PHC3-216ENST00000497171 LRTM1Q9HBL6 345 aa0.69□□□□□ -2.3
PHC3-216ENST00000497171 TAF9BQ9HBM6 251 aa0.69□□□□□ -2.3
PHC3-216ENST00000497171 ATPIF1Q9UII2 106 aa0.69□□□□□ -2.3
PHC3-216ENST00000497171 BOKQ9UMX3 212 aaPredicted RBP0.69□□□□□ -2.3
PHC3-216ENST00000497171 MYO18AQ92614 2054 aaKnown RBP0.68□□□□□ -2.3
PHC3-216ENST00000497171 UNC13CQ8NB66 2214 aa0.68□□□□□ -2.3
PHC3-216ENST00000497171 C3orf85A0A1B0GTC6 90 aa0.68□□□□□ -2.3
PHC3-216ENST00000497171 A0A1B0GV72 72 aa0.68□□□□□ -2.3
PHC3-216ENST00000497171 H7BYZ3 331 aa0.68□□□□□ -2.3
PHC3-216ENST00000497171 FRMPD1Q5SYB0 1578 aa0.68□□□□□ -2.3
PHC3-216ENST00000497171 TMEM78Q5T7P6 136 aa0.68□□□□□ -2.3
PHC3-216ENST00000497171 GLIPR1L1Q6UWM5 242 aa0.68□□□□□ -2.3
PHC3-216ENST00000497171 CASC2Q6XLA1 102 aa0.68□□□□□ -2.3
PHC3-216ENST00000497171 Q86TA4 180 aa0.68□□□□□ -2.3
PHC3-216ENST00000497171 TEX29Q8N6K0 151 aa0.68□□□□□ -2.3
PHC3-216ENST00000497171 OR5AK2Q8NH90 309 aa0.68□□□□□ -2.3
PHC3-216ENST00000497171 PRELID3AQ96N28 172 aa0.68□□□□□ -2.3
PHC3-216ENST00000497171 SELENOSQ9BQE4 189 aa0.68□□□□□ -2.3
PHC3-216ENST00000497171 LIMD2Q9BT23 127 aa0.68□□□□□ -2.3
PHC3-216ENST00000497171 ADGBQ8N7X0 1667 aa0.68□□□□□ -2.3
PHC3-216ENST00000497171 NISCHQ9Y2I1 1504 aa0.68□□□□□ -2.3
PHC3-216ENST00000497171 ERBINQ96RT1 1412 aa0.67□□□□□ -2.3
PHC3-216ENST00000497171 TRAPPC8Q9Y2L5 1435 aa0.67□□□□□ -2.3
PHC3-216ENST00000497171 A0A1W2PRE2 83 aa0.67□□□□□ -2.3
PHC3-216ENST00000497171 E7EQ34 232 aa0.67□□□□□ -2.3
PHC3-216ENST00000497171 TPT1P13693 172 aaKnown RBP0.67□□□□□ -2.3
PHC3-216ENST00000497171 FXYD4P59646 89 aa0.67□□□□□ -2.3
PHC3-216ENST00000497171 ZCCHC23Q6ZST2 131 aa0.67□□□□□ -2.3
PHC3-216ENST00000497171 LINC00305Q7Z4B0 112 aa0.67□□□□□ -2.3
PHC3-216ENST00000497171 NIT2Q9NQR4 276 aa0.67□□□□□ -2.3
PHC3-216ENST00000497171 KIAA1107Q9UPP5 1409 aa0.66□□□□□ -2.3
PHC3-216ENST00000497171 LOC107984156A0A0G2JMH3 177 aa0.66□□□□□ -2.3
PHC3-216ENST00000497171 TRBV30A0A0K0K1B3 111 aa0.66□□□□□ -2.3
PHC3-216ENST00000497171 ZNF727A8MUV8 499 aa0.66□□□□□ -2.3
PHC3-216ENST00000497171 TRACP01848 142 aa0.66□□□□□ -2.3
PHC3-216ENST00000497171 HRCT1Q6UXD1 115 aa0.66□□□□□ -2.3
PHC3-216ENST00000497171 LINC00299Q6ZSB3 139 aa0.66□□□□□ -2.3
PHC3-216ENST00000497171 ARL17AQ8IVW1 177 aa0.66□□□□□ -2.3
PHC3-216ENST00000497171 CLEC2BQ92478 149 aa0.66□□□□□ -2.3
PHC3-216ENST00000497171 DIRC1Q969H9 104 aa0.66□□□□□ -2.3
PHC3-216ENST00000497171 AP1S3Q96PC3 154 aa0.66□□□□□ -2.3
PHC3-216ENST00000497171 LXNQ9BS40 222 aa0.66□□□□□ -2.3
PHC3-216ENST00000497171 FKBP11Q9NYL4 201 aa0.66□□□□□ -2.3
PHC3-216ENST00000497171 TRAPPC2LQ9UL33 140 aa0.66□□□□□ -2.3
PHC3-216ENST00000497171 CNTRLQ7Z7A1 2325 aa0.66□□□□□ -2.3
PHC3-216ENST00000497171 CITO14578 2027 aa0.65□□□□□ -2.3
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms