RNA–Protein interactions for RNA: ENST00000494780.1

COL27A1-208, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 4

Gene COL27A1, Length 514 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-208ENST00000494780 MORN5Q5VZ52 161 aa16.17■□□□□ 0.18
COL27A1-208ENST00000494780 RXFP4Q8TDU9 374 aa16.17■□□□□ 0.18
COL27A1-208ENST00000494780 SAT2Q96F10 170 aaPredicted RBP16.17■□□□□ 0.18
COL27A1-208ENST00000494780 Q9H8V8 135 aa16.17■□□□□ 0.18
COL27A1-208ENST00000494780 ABCA13Q86UQ4 5058 aa16.16■□□□□ 0.18
COL27A1-208ENST00000494780 TRAV26-1A0A087WT03 109 aa16.16■□□□□ 0.18
COL27A1-208ENST00000494780 CAMLGP49069 296 aa16.16■□□□□ 0.18
COL27A1-208ENST00000494780 RAB31Q13636 194 aa16.16■□□□□ 0.18
COL27A1-208ENST00000494780 Q6ZRG5 221 aa16.16■□□□□ 0.18
COL27A1-208ENST00000494780 ODF3Q96PU9 254 aa16.16■□□□□ 0.18
COL27A1-208ENST00000494780 DNAJC4Q9NNZ3 241 aa16.16■□□□□ 0.18
COL27A1-208ENST00000494780 SNURFLB1AK76 121 aa16.15■□□□□ 0.18
COL27A1-208ENST00000494780 H3BQ15 152 aa16.15■□□□□ 0.18
COL27A1-208ENST00000494780 RLN2P04090 185 aa16.15■□□□□ 0.18
COL27A1-208ENST00000494780 ZNF846Q147U1 533 aa16.15■□□□□ 0.18
COL27A1-208ENST00000494780 GUK1Q16774 197 aa16.15■□□□□ 0.18
COL27A1-208ENST00000494780 CT45A10P0DMU9 189 aa16.14■□□□□ 0.17
COL27A1-208ENST00000494780 IL7P13232 177 aa16.14■□□□□ 0.17
COL27A1-208ENST00000494780 LEPP41159 167 aa16.14■□□□□ 0.17
COL27A1-208ENST00000494780 TTC32Q5I0X7 151 aa16.14■□□□□ 0.17
COL27A1-208ENST00000494780 NRARPQ7Z6K4 114 aa16.14■□□□□ 0.17
COL27A1-208ENST00000494780 GAGE12BA1L429 117 aa16.13■□□□□ 0.17
COL27A1-208ENST00000494780 NPIPB6E9PJ23 425 aa16.13■□□□□ 0.17
COL27A1-208ENST00000494780 H3BNG1 76 aa16.13■□□□□ 0.17
COL27A1-208ENST00000494780 CCSO14618 274 aa16.13■□□□□ 0.17
COL27A1-208ENST00000494780 GAGE7O76087 117 aa16.13■□□□□ 0.17
COL27A1-208ENST00000494780 GAGE12FP0CL80 117 aa16.13■□□□□ 0.17
COL27A1-208ENST00000494780 GAGE12GP0CL81 117 aa16.13■□□□□ 0.17
COL27A1-208ENST00000494780 GAGE12IP0CL82 117 aa16.13■□□□□ 0.17
COL27A1-208ENST00000494780 HOXA5P20719 270 aa16.13■□□□□ 0.17
COL27A1-208ENST00000494780 BCAP31P51572 246 aa16.13■□□□□ 0.17
COL27A1-208ENST00000494780 OR1L4Q8NGR5 311 aa16.13■□□□□ 0.17
COL27A1-208ENST00000494780 UPK3BQ9BT76 320 aa16.13■□□□□ 0.17
COL27A1-208ENST00000494780 C20orf85Q9H1P6 137 aa16.13■□□□□ 0.17
COL27A1-208ENST00000494780 A0A0J9YY99 117 aa16.12■□□□□ 0.17
COL27A1-208ENST00000494780 CAV2P51636 162 aa16.12■□□□□ 0.17
COL27A1-208ENST00000494780 MIC13Q5XKP0 118 aa16.12■□□□□ 0.17
COL27A1-208ENST00000494780 PFDN5Q99471 154 aa16.12■□□□□ 0.17
COL27A1-208ENST00000494780 PYGO2Q9BRQ0 406 aa16.12■□□□□ 0.17
COL27A1-208ENST00000494780 LSM5Q9Y4Y9 91 aaKnown RBP16.12■□□□□ 0.17
COL27A1-208ENST00000494780 TRAV5A0A0B4J249 113 aa16.11■□□□□ 0.17
COL27A1-208ENST00000494780 TRAV12-3A0A0B4J271 114 aa16.11■□□□□ 0.17
COL27A1-208ENST00000494780 J3KRW8 73 aa16.11■□□□□ 0.17
COL27A1-208ENST00000494780 ZNF253O75346 499 aa16.11■□□□□ 0.17
COL27A1-208ENST00000494780 DAZ2Q13117 558 aaKnown RBP16.11■□□□□ 0.17
COL27A1-208ENST00000494780 ZNF431Q8TF32 576 aaPredicted RBP16.11■□□□□ 0.17
COL27A1-208ENST00000494780 Q9H3A6 140 aa16.11■□□□□ 0.17
COL27A1-208ENST00000494780 UQCC1Q9NVA1 299 aa16.11■□□□□ 0.17
COL27A1-208ENST00000494780 WDR83OSQ9Y284 106 aa16.11■□□□□ 0.17
COL27A1-208ENST00000494780 FAM25EA8MYX2 175 aa16.1■□□□□ 0.17
COL27A1-208ENST00000494780 CST7O76096 145 aa16.1■□□□□ 0.17
COL27A1-208ENST00000494780 KRTAP1-5Q9BYS1 174 aa16.1■□□□□ 0.17
COL27A1-208ENST00000494780 C11orf1Q9H5F2 150 aa16.1■□□□□ 0.17
COL27A1-208ENST00000494780 A0A1W2PPQ1 181 aa16.09■□□□□ 0.17
COL27A1-208ENST00000494780 FAM24AA6NFZ4 105 aa16.09■□□□□ 0.17
COL27A1-208ENST00000494780 RPL29P47914 159 aaKnown RBP16.09■□□□□ 0.17
COL27A1-208ENST00000494780 ESRGQ1W209 222 aa16.09■□□□□ 0.17
COL27A1-208ENST00000494780 VWC2Q2TAL6 325 aa16.09■□□□□ 0.17
COL27A1-208ENST00000494780 C12orf45Q8N5I9 185 aaPredicted RBP16.09■□□□□ 0.17
COL27A1-208ENST00000494780 MRPL53Q96EL3 112 aaKnown RBP16.09■□□□□ 0.17
COL27A1-208ENST00000494780 ZNF586Q9NXT0 402 aa16.09■□□□□ 0.17
COL27A1-208ENST00000494780 MRPS16Q9Y3D3 137 aaKnown RBP16.09■□□□□ 0.17
COL27A1-208ENST00000494780 HSPG2P98160 4391 aa16.09■□□□□ 0.17
COL27A1-208ENST00000494780 C5orf51A6NDU8 294 aa16.08■□□□□ 0.16
COL27A1-208ENST00000494780 PLA2G10O15496 165 aa16.08■□□□□ 0.16
COL27A1-208ENST00000494780 SLC25A5P05141 298 aaKnown RBP16.08■□□□□ 0.16
COL27A1-208ENST00000494780 BTF3P20290 206 aaKnown RBP16.08■□□□□ 0.16
COL27A1-208ENST00000494780 PVALBP20472 110 aaPredicted RBP16.08■□□□□ 0.16
COL27A1-208ENST00000494780 SPATA12Q7Z6I5 190 aa16.08■□□□□ 0.16
COL27A1-208ENST00000494780 MAPKAPK5-AS1Q8N8E1 139 aa16.08■□□□□ 0.16
COL27A1-208ENST00000494780 SLC39A9Q9NUM3 307 aa16.08■□□□□ 0.16
COL27A1-208ENST00000494780 LYRM1O43325 122 aa16.07■□□□□ 0.16
COL27A1-208ENST00000494780 Q6ZTI0 123 aa16.07■□□□□ 0.16
COL27A1-208ENST00000494780 ZNF680Q8NEM1 530 aa16.07■□□□□ 0.16
COL27A1-208ENST00000494780 C2orf50Q96LR7 162 aa16.07■□□□□ 0.16
COL27A1-208ENST00000494780 TMPRSS5Q9H3S3 457 aa16.07■□□□□ 0.16
COL27A1-208ENST00000494780 LRP1BQ9NZR2 4599 aa16.06■□□□□ 0.16
COL27A1-208ENST00000494780 TRBV19A0A075B6N1 114 aa16.06■□□□□ 0.16
COL27A1-208ENST00000494780 TCRBP04435 133 aa16.06■□□□□ 0.16
COL27A1-208ENST00000494780 S100A11P31949 105 aa16.06■□□□□ 0.16
COL27A1-208ENST00000494780 SULT1A1P50225 295 aa16.06■□□□□ 0.16
COL27A1-208ENST00000494780 CHAC2Q8WUX2 184 aa16.06■□□□□ 0.16
COL27A1-208ENST00000494780 C18orf15Q96N68 181 aa16.06■□□□□ 0.16
COL27A1-208ENST00000494780 LYRM2Q9NU23 88 aaPredicted RBP16.06■□□□□ 0.16
COL27A1-208ENST00000494780 TMEM14CQ9P0S9 112 aa16.06■□□□□ 0.16
COL27A1-208ENST00000494780 PRELID1Q9Y255 219 aa16.06■□□□□ 0.16
COL27A1-208ENST00000494780 UBE2L5PA0A1B0GUS4 154 aa16.05■□□□□ 0.16
COL27A1-208ENST00000494780 C7orf71A4D174 169 aa16.05■□□□□ 0.16
COL27A1-208ENST00000494780 BAXQ07812 192 aa16.05■□□□□ 0.16
COL27A1-208ENST00000494780 LINC00477Q96M19 166 aa16.05■□□□□ 0.16
COL27A1-208ENST00000494780 SEC22CQ9BRL7 303 aa16.05■□□□□ 0.16
COL27A1-208ENST00000494780 LINC00467Q9BRT7 94 aa16.05■□□□□ 0.16
COL27A1-208ENST00000494780 TRAV6A0A075B6T7 132 aa16.04■□□□□ 0.16
COL27A1-208ENST00000494780 M0R3E3 92 aa16.04■□□□□ 0.16
COL27A1-208ENST00000494780 HIST1H1EP10412 219 aaKnown RBP16.04■□□□□ 0.16
COL27A1-208ENST00000494780 ERCC8Q13216 396 aa16.04■□□□□ 0.16
COL27A1-208ENST00000494780 PDE6HQ13956 83 aa16.04■□□□□ 0.16
COL27A1-208ENST00000494780 C11orf72Q8NBR9 251 aa16.04■□□□□ 0.16
COL27A1-208ENST00000494780 FAM19A4Q96LR4 140 aa16.04■□□□□ 0.16
COL27A1-208ENST00000494780 GSN-AS1Q9NRJ2 163 aa16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms