RNA–Protein interactions for RNA: ENST00000494667.5

PRKD3-210, Transcript of protein kinase D3, humanhuman

TSL 1 (best)

Gene PRKD3, Length 4,326 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKD3-210ENST00000494667 TMEM219Q86XT9 240 aa3.75□□□□□ -1.81
PRKD3-210ENST00000494667 FOXC2Q99958 501 aa3.75□□□□□ -1.81
PRKD3-210ENST00000494667 TTTY13Q9BZ97 58 aa3.75□□□□□ -1.81
PRKD3-210ENST00000494667 SPRY4Q9C004 299 aa3.75□□□□□ -1.81
PRKD3-210ENST00000494667 IGHV3-43A0A0B4J1X8 118 aa3.74□□□□□ -1.81
PRKD3-210ENST00000494667 SLC25A20O43772 301 aa3.74□□□□□ -1.81
PRKD3-210ENST00000494667 SAA1P0DJI8 122 aaPredicted RBP3.74□□□□□ -1.81
PRKD3-210ENST00000494667 IGHV3-43DP0DP04 118 aa3.74□□□□□ -1.81
PRKD3-210ENST00000494667 NXPH1P58417 271 aa3.74□□□□□ -1.81
PRKD3-210ENST00000494667 MBNL2Q5VZF2 373 aaKnown RBP3.74□□□□□ -1.81
PRKD3-210ENST00000494667 NEXN-AS1Q8NBZ9 246 aa3.74□□□□□ -1.81
PRKD3-210ENST00000494667 AKIRIN1Q9H9L7 192 aaPredicted RBP3.74□□□□□ -1.81
PRKD3-210ENST00000494667 GNG12Q9UBI6 72 aa3.74□□□□□ -1.81
PRKD3-210ENST00000494667 H3BRN7 92 aa3.74□□□□□ -1.81
PRKD3-210ENST00000494667 H3BT86 120 aa3.74□□□□□ -1.81
PRKD3-210ENST00000494667 UQCRQO14949 82 aa3.74□□□□□ -1.81
PRKD3-210ENST00000494667 NDUFA7O95182 113 aa3.74□□□□□ -1.81
PRKD3-210ENST00000494667 TNFRSF6BO95407 300 aa3.74□□□□□ -1.81
PRKD3-210ENST00000494667 ACYP1P07311 99 aa3.74□□□□□ -1.81
PRKD3-210ENST00000494667 PRDX2P32119 198 aa3.74□□□□□ -1.81
PRKD3-210ENST00000494667 ATP5J2P56134 94 aa3.74□□□□□ -1.81
PRKD3-210ENST00000494667 MRGPRG-AS1Q2M3A8 158 aa3.74□□□□□ -1.81
PRKD3-210ENST00000494667 ZFP2Q6ZN57 461 aa3.74□□□□□ -1.81
PRKD3-210ENST00000494667 C3orf22Q8N5N4 141 aa3.74□□□□□ -1.81
PRKD3-210ENST00000494667 SRSF8Q9BRL6 282 aaKnown RBP3.74□□□□□ -1.81
PRKD3-210ENST00000494667 METRNQ9UJH8 293 aa3.74□□□□□ -1.81
PRKD3-210ENST00000494667 PRRC2BQ5JSZ5 2229 aaKnown RBP3.74□□□□□ -1.81
PRKD3-210ENST00000494667 IGKV1D-17A0A075B6S4 117 aa3.74□□□□□ -1.81
PRKD3-210ENST00000494667 TRAV40A0A0B4J280 105 aa3.74□□□□□ -1.81
PRKD3-210ENST00000494667 TIMM23O14925 209 aa3.74□□□□□ -1.81
PRKD3-210ENST00000494667 LHBP01229 141 aa3.74□□□□□ -1.81
PRKD3-210ENST00000494667 IGHV3-30P01768 117 aa3.74□□□□□ -1.81
PRKD3-210ENST00000494667 IGHV3-30-5P0DP03 117 aa3.74□□□□□ -1.81
PRKD3-210ENST00000494667 CRYGAP11844 174 aa3.74□□□□□ -1.81
PRKD3-210ENST00000494667 CXCL5P42830 114 aa3.74□□□□□ -1.81
PRKD3-210ENST00000494667 WT1-ASQ06250 92 aa3.74□□□□□ -1.81
PRKD3-210ENST00000494667 FAM201AQ5SY85 155 aa3.74□□□□□ -1.81
PRKD3-210ENST00000494667 TMEM170BQ5T4T1 132 aa3.74□□□□□ -1.81
PRKD3-210ENST00000494667 Q8N1Y9 231 aa3.74□□□□□ -1.81
PRKD3-210ENST00000494667 NRACQ8N912 160 aa3.74□□□□□ -1.81
PRKD3-210ENST00000494667 TOMM6Q96B49 74 aa3.74□□□□□ -1.81
PRKD3-210ENST00000494667 TIMD4Q96H15 378 aa3.74□□□□□ -1.81
PRKD3-210ENST00000494667 ZNF407Q9C0G0 2248 aa3.74□□□□□ -1.81
PRKD3-210ENST00000494667 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa3.74□□□□□ -1.81
PRKD3-210ENST00000494667 TRBV10-2A0A0K0K1G8 114 aa3.74□□□□□ -1.81
PRKD3-210ENST00000494667 IGLV2-23P01705 113 aa3.74□□□□□ -1.81
PRKD3-210ENST00000494667 HIST1H4AP62805 103 aaKnown RBP3.74□□□□□ -1.81
PRKD3-210ENST00000494667 LAGE3Q14657 143 aa3.74□□□□□ -1.81
PRKD3-210ENST00000494667 PLGLAQ15195 96 aa3.74□□□□□ -1.81
PRKD3-210ENST00000494667 MLANAQ16655 118 aa3.74□□□□□ -1.81
PRKD3-210ENST00000494667 PRNTQ86SH4 94 aa3.74□□□□□ -1.81
PRKD3-210ENST00000494667 DTX2Q86UW9 622 aa3.74□□□□□ -1.81
PRKD3-210ENST00000494667 LINC00311Q8N616 119 aa3.74□□□□□ -1.81
PRKD3-210ENST00000494667 MRAPQ8TCY5 172 aa3.74□□□□□ -1.81
PRKD3-210ENST00000494667 SHANK2-AS3Q9BTD1 123 aa3.74□□□□□ -1.81
PRKD3-210ENST00000494667 HIGD1AQ9Y241 93 aa3.74□□□□□ -1.81
PRKD3-210ENST00000494667 LOC389332A0A1B0GUA5 103 aa3.73□□□□□ -1.81
PRKD3-210ENST00000494667 LINC01548A6NM66 108 aa3.73□□□□□ -1.81
PRKD3-210ENST00000494667 DEFB108AA8MXU0 73 aa3.73□□□□□ -1.81
PRKD3-210ENST00000494667 WNT9BO14905 357 aa3.73□□□□□ -1.81
PRKD3-210ENST00000494667 SCRG1O75711 98 aa3.73□□□□□ -1.81
PRKD3-210ENST00000494667 IGFBP4P22692 258 aa3.73□□□□□ -1.81
PRKD3-210ENST00000494667 PAPPA-AS1Q5QFB9 102 aa3.73□□□□□ -1.81
PRKD3-210ENST00000494667 MDP1Q86V88 176 aa3.73□□□□□ -1.81
PRKD3-210ENST00000494667 FAM169BQ8N8A8 192 aa3.73□□□□□ -1.81
PRKD3-210ENST00000494667 FAM57AQ8TBR7 257 aa3.73□□□□□ -1.81
PRKD3-210ENST00000494667 C21orf62Q9NYP8 219 aa3.73□□□□□ -1.81
PRKD3-210ENST00000494667 MRPL36Q9P0J6 103 aaKnown RBP3.73□□□□□ -1.81
PRKD3-210ENST00000494667 TRAV8-4A0A0B4J246 113 aa3.73□□□□□ -1.81
PRKD3-210ENST00000494667 A0A0J9YX75 114 aa3.73□□□□□ -1.81
PRKD3-210ENST00000494667 A0A0J9YY99 117 aa3.73□□□□□ -1.81
PRKD3-210ENST00000494667 TRBV30A0A0K0K1B3 111 aa3.73□□□□□ -1.81
PRKD3-210ENST00000494667 SH2D1AO60880 128 aa3.73□□□□□ -1.81
PRKD3-210ENST00000494667 IGHV3-13P01766 116 aa3.73□□□□□ -1.81
PRKD3-210ENST00000494667 PRSS1P07477 247 aa3.73□□□□□ -1.81
PRKD3-210ENST00000494667 CFC1BP0CG36 223 aa3.73□□□□□ -1.81
PRKD3-210ENST00000494667 CFC1P0CG37 223 aa3.73□□□□□ -1.81
PRKD3-210ENST00000494667 C6orf15Q6UXA7 325 aaPredicted RBP3.73□□□□□ -1.81
PRKD3-210ENST00000494667 GOLT1AQ6ZVE7 132 aa3.73□□□□□ -1.81
PRKD3-210ENST00000494667 SLC25A29Q8N8R3 303 aa3.73□□□□□ -1.81
PRKD3-210ENST00000494667 PRR25Q96S07 402 aa3.73□□□□□ -1.81
PRKD3-210ENST00000494667 CRYGDP07320 174 aa3.73□□□□□ -1.81
PRKD3-210ENST00000494667 ORM2P19652 201 aa3.73□□□□□ -1.81
PRKD3-210ENST00000494667 DEFB132Q7Z7B7 95 aa3.73□□□□□ -1.81
PRKD3-210ENST00000494667 C15orf53Q8NAA6 179 aa3.73□□□□□ -1.81
PRKD3-210ENST00000494667 SCNM1Q9BWG6 230 aa3.73□□□□□ -1.81
PRKD3-210ENST00000494667 PRO1854Q9UHT4 67 aa3.73□□□□□ -1.81
PRKD3-210ENST00000494667 RPUSD1Q9UJJ7 312 aaKnown RBP3.73□□□□□ -1.81
PRKD3-210ENST00000494667 A0A096LPE4 126 aa3.72□□□□□ -1.81
PRKD3-210ENST00000494667 A0A1W2PPZ6 126 aa3.72□□□□□ -1.81
PRKD3-210ENST00000494667 ERCC8Q13216 396 aa3.72□□□□□ -1.81
PRKD3-210ENST00000494667 TDHQ8IZJ6 230 aa3.72□□□□□ -1.81
PRKD3-210ENST00000494667 OR13C6PQ8NH95 151 aa3.72□□□□□ -1.81
PRKD3-210ENST00000494667 TMEM263Q8WUH6 116 aaKnown RBP3.72□□□□□ -1.81
PRKD3-210ENST00000494667 NGBQ9NPG2 151 aa3.72□□□□□ -1.81
PRKD3-210ENST00000494667 SPAG17Q6Q759 2223 aa3.72□□□□□ -1.81
PRKD3-210ENST00000494667 ATXN8Q156A1 80 aa3.72□□□□□ -1.81
PRKD3-210ENST00000494667 AMELXQ99217 191 aa3.72□□□□□ -1.81
PRKD3-210ENST00000494667 RAXQ9Y2V3 346 aa3.72□□□□□ -1.81
PRKD3-210ENST00000494667 TRAV8-1A0A0A6YYK1 113 aa3.72□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms