RNA–Protein interactions for RNA: ENST00000494465.5

ATG4B-225, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 5

Gene ATG4B, Length 2,365 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-225ENST00000494465 ZC2HC1AQ96GY0 325 aa12.66□□□□□ -0.38
ATG4B-225ENST00000494465 FOXC2Q99958 501 aa12.66□□□□□ -0.38
ATG4B-225ENST00000494465 SERTM2A0A1B0GWG4 89 aa12.65□□□□□ -0.38
ATG4B-225ENST00000494465 TMEM89A2RUT3 159 aa12.65□□□□□ -0.38
ATG4B-225ENST00000494465 IFITM10A6NMD0 228 aa12.65□□□□□ -0.38
ATG4B-225ENST00000494465 CHEK1O14757 476 aa12.65□□□□□ -0.38
ATG4B-225ENST00000494465 CBLN1P23435 193 aa12.65□□□□□ -0.38
ATG4B-225ENST00000494465 CSN1S1P47710 185 aa12.65□□□□□ -0.38
ATG4B-225ENST00000494465 SLC35B1P78383 322 aa12.65□□□□□ -0.38
ATG4B-225ENST00000494465 GFI1BQ5VTD9 330 aa12.65□□□□□ -0.38
ATG4B-225ENST00000494465 SIGLECL1Q8N7X8 197 aa12.65□□□□□ -0.38
ATG4B-225ENST00000494465 GLMPQ8WWB7 406 aa12.65□□□□□ -0.38
ATG4B-225ENST00000494465 IGKV2-40A0A087WW87 121 aaPredicted RBP12.65□□□□□ -0.38
ATG4B-225ENST00000494465 NPIPB6E9PJ23 425 aa12.65□□□□□ -0.38
ATG4B-225ENST00000494465 SPINK4O60575 86 aa12.65□□□□□ -0.38
ATG4B-225ENST00000494465 IGKV2D-40P01614 121 aaPredicted RBP12.65□□□□□ -0.38
ATG4B-225ENST00000494465 FAM209BQ5JX69 171 aa12.65□□□□□ -0.38
ATG4B-225ENST00000494465 TSKUQ8WUA8 353 aa12.65□□□□□ -0.38
ATG4B-225ENST00000494465 NPFFR1Q9GZQ6 430 aa12.65□□□□□ -0.38
ATG4B-225ENST00000494465 RPP21Q9H633 154 aaKnown RBP12.65□□□□□ -0.38
ATG4B-225ENST00000494465 IZUMO1RA6ND01 250 aa12.64□□□□□ -0.39
ATG4B-225ENST00000494465 ZNF705FA8MVS1 300 aaPredicted RBP12.64□□□□□ -0.39
ATG4B-225ENST00000494465 CDX1P47902 265 aaPredicted RBP12.64□□□□□ -0.39
ATG4B-225ENST00000494465 CT83Q5H943 113 aa12.64□□□□□ -0.39
ATG4B-225ENST00000494465 LCN12Q6JVE5 192 aa12.64□□□□□ -0.39
ATG4B-225ENST00000494465 NUP35Q8NFH5 326 aa12.64□□□□□ -0.39
ATG4B-225ENST00000494465 DUX5Q96PT3 197 aa12.64□□□□□ -0.39
ATG4B-225ENST00000494465 NEU1Q99519 415 aa12.64□□□□□ -0.39
ATG4B-225ENST00000494465 SONP18583 2426 aaKnown RBP12.64□□□□□ -0.39
ATG4B-225ENST00000494465 TRAV8-2A0A0B4J237 113 aa12.63□□□□□ -0.39
ATG4B-225ENST00000494465 P01737 135 aa12.63□□□□□ -0.39
ATG4B-225ENST00000494465 RNF182Q8N6D2 247 aa12.63□□□□□ -0.39
ATG4B-225ENST00000494465 SLC50A1Q9BRV3 221 aa12.63□□□□□ -0.39
ATG4B-225ENST00000494465 PEF1Q9UBV8 284 aaKnown RBP12.63□□□□□ -0.39
ATG4B-225ENST00000494465 CRIP1P50238 77 aa12.63□□□□□ -0.39
ATG4B-225ENST00000494465 LINC00518Q8N0U6 118 aa12.63□□□□□ -0.39
ATG4B-225ENST00000494465 GBGT1Q8N5D6 347 aa12.63□□□□□ -0.39
ATG4B-225ENST00000494465 C8orf49Q96NF6 230 aa12.63□□□□□ -0.39
ATG4B-225ENST00000494465 VGLL1Q99990 258 aa12.63□□□□□ -0.39
ATG4B-225ENST00000494465 GNB1LQ9BYB4 327 aa12.63□□□□□ -0.39
ATG4B-225ENST00000494465 RPLP1P05386 114 aaKnown RBP12.62□□□□□ -0.39
ATG4B-225ENST00000494465 COA6Q5JTJ3 125 aaKnown RBP12.62□□□□□ -0.39
ATG4B-225ENST00000494465 C8orf86Q6ZUL3 223 aa12.62□□□□□ -0.39
ATG4B-225ENST00000494465 HIST3H2BBQ8N257 126 aa12.62□□□□□ -0.39
ATG4B-225ENST00000494465 Q8N2B8 174 aa12.62□□□□□ -0.39
ATG4B-225ENST00000494465 MYOZ3Q8TDC0 251 aa12.62□□□□□ -0.39
ATG4B-225ENST00000494465 NAT8BQ9UHF3 227 aa12.62□□□□□ -0.39
ATG4B-225ENST00000494465 HIGD1CA8MV81 97 aa12.62□□□□□ -0.39
ATG4B-225ENST00000494465 PRAC2D3DTV9 90 aa12.62□□□□□ -0.39
ATG4B-225ENST00000494465 MRPL54Q6P161 138 aaKnown RBP12.62□□□□□ -0.39
ATG4B-225ENST00000494465 TMEM136Q6ZRR5 245 aa12.62□□□□□ -0.39
ATG4B-225ENST00000494465 COX8CQ7Z4L0 72 aa12.62□□□□□ -0.39
ATG4B-225ENST00000494465 GTSF1Q8WW33 167 aa12.62□□□□□ -0.39
ATG4B-225ENST00000494465 MRPL18Q9H0U6 180 aaKnown RBP12.62□□□□□ -0.39
ATG4B-225ENST00000494465 SNURFLB1AK76 121 aa12.61□□□□□ -0.39
ATG4B-225ENST00000494465 MEOX2P50222 304 aa12.61□□□□□ -0.39
ATG4B-225ENST00000494465 GPHB5Q86YW7 130 aa12.61□□□□□ -0.39
ATG4B-225ENST00000494465 DAZAP1Q96EP5 407 aaKnown RBP12.61□□□□□ -0.39
ATG4B-225ENST00000494465 XKRY2A2RUG3 117 aa12.61□□□□□ -0.39
ATG4B-225ENST00000494465 FOXE3Q13461 319 aa12.61□□□□□ -0.39
ATG4B-225ENST00000494465 TCF24Q7RTU0 167 aa12.61□□□□□ -0.39
ATG4B-225ENST00000494465 ANK3Q12955 4377 aaKnown RBP12.6□□□□□ -0.39
ATG4B-225ENST00000494465 ACANP16112 2415 aa12.6□□□□□ -0.39
ATG4B-225ENST00000494465 A8MWL6 223 aa12.6□□□□□ -0.39
ATG4B-225ENST00000494465 TEX29Q8N6K0 151 aa12.6□□□□□ -0.39
ATG4B-225ENST00000494465 PRR25Q96S07 402 aa12.6□□□□□ -0.39
ATG4B-225ENST00000494465 GPR61Q9BZJ8 451 aa12.6□□□□□ -0.39
ATG4B-225ENST00000494465 FBLL1A6NHQ2 334 aaKnown RBP12.59□□□□□ -0.39
ATG4B-225ENST00000494465 RPL19P84098 196 aaKnown RBP12.59□□□□□ -0.39
ATG4B-225ENST00000494465 TM4SF20Q53R12 229 aa12.59□□□□□ -0.39
ATG4B-225ENST00000494465 RNF152Q8N8N0 203 aa12.59□□□□□ -0.39
ATG4B-225ENST00000494465 OR4B1Q8NGF8 309 aa12.59□□□□□ -0.39
ATG4B-225ENST00000494465 Q8TAT8 98 aa12.59□□□□□ -0.39
ATG4B-225ENST00000494465 WIPF2Q8TF74 440 aaPredicted RBP12.59□□□□□ -0.39
ATG4B-225ENST00000494465 ELANEP08246 267 aa12.59□□□□□ -0.39
ATG4B-225ENST00000494465 PDZD11Q5EBL8 140 aa12.59□□□□□ -0.39
ATG4B-225ENST00000494465 WDR73Q6P4I2 378 aa12.59□□□□□ -0.39
ATG4B-225ENST00000494465 TMEM86BQ8N661 226 aa12.59□□□□□ -0.39
ATG4B-225ENST00000494465 GFRA4Q9GZZ7 299 aa12.59□□□□□ -0.39
ATG4B-225ENST00000494465 CUBNO60494 3623 aa12.58□□□□□ -0.39
ATG4B-225ENST00000494465 IGHV7-4-1A0A0J9YVY3 117 aa12.58□□□□□ -0.4
ATG4B-225ENST00000494465 CD5LO43866 347 aa12.58□□□□□ -0.4
ATG4B-225ENST00000494465 COX19Q49B96 90 aa12.58□□□□□ -0.4
ATG4B-225ENST00000494465 GDF5OSQ5U4N7 250 aa12.58□□□□□ -0.4
ATG4B-225ENST00000494465 MRPL53Q96EL3 112 aaKnown RBP12.58□□□□□ -0.4
ATG4B-225ENST00000494465 DAZ1Q9NQZ3 744 aaKnown RBP12.58□□□□□ -0.4
ATG4B-225ENST00000494465 FASNP49327 2511 aaKnown RBP12.58□□□□□ -0.4
ATG4B-225ENST00000494465 RBAKDNA6NC62 111 aa12.58□□□□□ -0.4
ATG4B-225ENST00000494465 MT-ND6P03923 174 aa12.58□□□□□ -0.4
ATG4B-225ENST00000494465 S100A8P05109 93 aa12.58□□□□□ -0.4
ATG4B-225ENST00000494465 EDN2P20800 178 aa12.58□□□□□ -0.4
ATG4B-225ENST00000494465 ERCC8Q13216 396 aa12.58□□□□□ -0.4
ATG4B-225ENST00000494465 SAPCD1Q5SSQ6 148 aa12.58□□□□□ -0.4
ATG4B-225ENST00000494465 RASL11AQ6T310 242 aa12.58□□□□□ -0.4
ATG4B-225ENST00000494465 OR2D3Q8NGH3 330 aa12.58□□□□□ -0.4
ATG4B-225ENST00000494465 A0A1B0GXF2 115 aa12.57□□□□□ -0.4
ATG4B-225ENST00000494465 FAM231BA6NCW3 169 aa12.57□□□□□ -0.4
ATG4B-225ENST00000494465 SOCS3O14543 225 aa12.57□□□□□ -0.4
ATG4B-225ENST00000494465 GZMBP10144 247 aa12.57□□□□□ -0.4
ATG4B-225ENST00000494465 HECTD1Q9ULT8 2610 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 80.8 ms