RNA–Protein interactions for RNA: ENST00000493886.5

VCP-207, Transcript of valosin containing protein, humanhuman

TSL 2

Gene VCP, Length 2,942 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-207ENST00000493886 PSG8Q9UQ74 426 aa10.83□□□□□ -0.68
VCP-207ENST00000493886 TRAV8-1A0A0A6YYK1 113 aa10.82□□□□□ -0.68
VCP-207ENST00000493886 TSPAN13O95857 204 aa10.82□□□□□ -0.68
VCP-207ENST00000493886 Q56UQ5 140 aa10.82□□□□□ -0.68
VCP-207ENST00000493886 OR4B1Q8NGF8 309 aa10.82□□□□□ -0.68
VCP-207ENST00000493886 FANCD2OSQ96PS1 177 aa10.82□□□□□ -0.68
VCP-207ENST00000493886 SLC25A39Q9BZJ4 359 aaPredicted RBP10.82□□□□□ -0.68
VCP-207ENST00000493886 UQCR10Q9UDW1 63 aa10.82□□□□□ -0.68
VCP-207ENST00000493886 TP73-AS1Q9UF72 201 aa10.82□□□□□ -0.68
VCP-207ENST00000493886 IGLV11-55A0A075B6I3 123 aa10.82□□□□□ -0.68
VCP-207ENST00000493886 FAM106CPP0CH98 169 aa10.82□□□□□ -0.68
VCP-207ENST00000493886 TTC9CQ8N5M4 171 aa10.82□□□□□ -0.68
VCP-207ENST00000493886 MRPL27Q9P0M9 148 aaKnown RBP10.82□□□□□ -0.68
VCP-207ENST00000493886 SAA4P35542 130 aa10.81□□□□□ -0.68
VCP-207ENST00000493886 FAM120AOSQ5T036 256 aa10.81□□□□□ -0.68
VCP-207ENST00000493886 MBD6Q96DN6 1003 aa10.81□□□□□ -0.68
VCP-207ENST00000493886 EPDR1Q9UM22 224 aa10.81□□□□□ -0.68
VCP-207ENST00000493886 S4R3C0 116 aa10.81□□□□□ -0.68
VCP-207ENST00000493886 M0R2Z0 102 aa10.81□□□□□ -0.68
VCP-207ENST00000493886 C1RLQ9NZP8 487 aa10.81□□□□□ -0.68
VCP-207ENST00000493886 RPL32P62910 135 aaKnown RBP10.81□□□□□ -0.68
VCP-207ENST00000493886 Q8N9W7 124 aa10.81□□□□□ -0.68
VCP-207ENST00000493886 DAZAP1Q96EP5 407 aaKnown RBP10.81□□□□□ -0.68
VCP-207ENST00000493886 GRAMD2BQ96HH9 432 aa10.81□□□□□ -0.68
VCP-207ENST00000493886 TIMM8BQ9Y5J9 83 aaPredicted RBP10.81□□□□□ -0.68
VCP-207ENST00000493886 IGHV7-81A0A0B4J1V7 117 aa10.8□□□□□ -0.68
VCP-207ENST00000493886 TGFAP01135 160 aa10.8□□□□□ -0.68
VCP-207ENST00000493886 PGLYRP4Q96LB8 373 aa10.8□□□□□ -0.68
VCP-207ENST00000493886 CCL19Q99731 98 aa10.8□□□□□ -0.68
VCP-207ENST00000493886 UFC1Q9Y3C8 167 aa10.8□□□□□ -0.68
VCP-207ENST00000493886 CFAP46Q8IYW2 2715 aa10.8□□□□□ -0.68
VCP-207ENST00000493886 ACACBO00763 2458 aa10.8□□□□□ -0.68
VCP-207ENST00000493886 CTRLP40313 264 aa10.8□□□□□ -0.68
VCP-207ENST00000493886 TMEM14CQ9P0S9 112 aa10.8□□□□□ -0.68
VCP-207ENST00000493886 HIST1H1EP10412 219 aaKnown RBP10.79□□□□□ -0.68
VCP-207ENST00000493886 EGR2P11161 476 aaPredicted RBP10.79□□□□□ -0.68
VCP-207ENST00000493886 MFAP4P55083 255 aa10.79□□□□□ -0.68
VCP-207ENST00000493886 COX19Q49B96 90 aa10.79□□□□□ -0.68
VCP-207ENST00000493886 ZNF491Q8N8L2 437 aa10.79□□□□□ -0.68
VCP-207ENST00000493886 Q9H3A6 140 aa10.79□□□□□ -0.68
VCP-207ENST00000493886 NPFFO15130 113 aa10.79□□□□□ -0.68
VCP-207ENST00000493886 EBLN2Q6P2I7 272 aa10.79□□□□□ -0.68
VCP-207ENST00000493886 RNF125Q96EQ8 232 aa10.79□□□□□ -0.68
VCP-207ENST00000493886 HLA-DRB1P01911 266 aa10.78□□□□□ -0.68
VCP-207ENST00000493886 IL4P05112 153 aa10.78□□□□□ -0.68
VCP-207ENST00000493886 IGLC2P0DOY2 106 aa10.78□□□□□ -0.68
VCP-207ENST00000493886 IGLC3P0DOY3 106 aa10.78□□□□□ -0.68
VCP-207ENST00000493886 PIP4P2Q8N4L2 257 aa10.78□□□□□ -0.68
VCP-207ENST00000493886 PIMREGQ9BSJ6 248 aa10.78□□□□□ -0.68
VCP-207ENST00000493886 SHANK2-AS3Q9BTD1 123 aa10.78□□□□□ -0.68
VCP-207ENST00000493886 C7orf69Q9H7B7 122 aa10.78□□□□□ -0.68
VCP-207ENST00000493886 IGSF10Q6WRI0 2623 aa10.78□□□□□ -0.68
VCP-207ENST00000493886 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP10.78□□□□□ -0.68
VCP-207ENST00000493886 FAM181BA6NEQ2 426 aa10.78□□□□□ -0.68
VCP-207ENST00000493886 H3BRN7 92 aa10.78□□□□□ -0.68
VCP-207ENST00000493886 FAM231DQ6ZW35 169 aa10.78□□□□□ -0.68
VCP-207ENST00000493886 EXOC3-AS1Q8N2X6 119 aa10.78□□□□□ -0.68
VCP-207ENST00000493886 CENPVL3A0A0U1RRI6 287 aa10.78□□□□□ -0.68
VCP-207ENST00000493886 F8W735 103 aaPredicted RBP10.78□□□□□ -0.68
VCP-207ENST00000493886 TM4SF20Q53R12 229 aa10.78□□□□□ -0.68
VCP-207ENST00000493886 SPATA12Q7Z6I5 190 aa10.78□□□□□ -0.68
VCP-207ENST00000493886 CIARTQ8N365 385 aaPredicted RBP10.78□□□□□ -0.68
VCP-207ENST00000493886 GTSF1Q8WW33 167 aa10.78□□□□□ -0.68
VCP-207ENST00000493886 C21orf62Q9NYP8 219 aa10.78□□□□□ -0.68
VCP-207ENST00000493886 KLF12Q9Y4X4 402 aa10.78□□□□□ -0.68
VCP-207ENST00000493886 IGHV4-61A0A0C4DH41 118 aa10.77□□□□□ -0.69
VCP-207ENST00000493886 WI2-2373I1.2A0A1W2PRP0 233 aa10.77□□□□□ -0.69
VCP-207ENST00000493886 OR2J3O76001 311 aa10.77□□□□□ -0.69
VCP-207ENST00000493886 TSPOP30536 169 aa10.77□□□□□ -0.69
VCP-207ENST00000493886 PSG9Q00887 426 aa10.77□□□□□ -0.69
VCP-207ENST00000493886 GPR82Q96P67 336 aa10.77□□□□□ -0.69
VCP-207ENST00000493886 TAX1BP3O14907 124 aa10.77□□□□□ -0.69
VCP-207ENST00000493886 P01737 135 aa10.77□□□□□ -0.69
VCP-207ENST00000493886 ZNF138P52744 262 aa10.77□□□□□ -0.69
VCP-207ENST00000493886 PAX8Q06710 450 aa10.77□□□□□ -0.69
VCP-207ENST00000493886 LINC00173Q6ZV60 143 aa10.77□□□□□ -0.69
VCP-207ENST00000493886 C10orf105Q8TEF2 133 aa10.77□□□□□ -0.69
VCP-207ENST00000493886 MRAP2Q96G30 205 aa10.77□□□□□ -0.69
VCP-207ENST00000493886 MCRIP2Q9BUT9 160 aaKnown RBP10.77□□□□□ -0.69
VCP-207ENST00000493886 RPP21Q9H633 154 aaKnown RBP10.77□□□□□ -0.69
VCP-207ENST00000493886 OTORQ9NRC9 128 aa10.77□□□□□ -0.69
VCP-207ENST00000493886 TCRAP04437 139 aa10.76□□□□□ -0.69
VCP-207ENST00000493886 BPIFA4PQ86YQ2 179 aa10.76□□□□□ -0.69
VCP-207ENST00000493886 B5MCH6 92 aa10.76□□□□□ -0.69
VCP-207ENST00000493886 IGHV3-23P01764 117 aa10.76□□□□□ -0.69
VCP-207ENST00000493886 GOLT1AQ6ZVE7 132 aa10.76□□□□□ -0.69
VCP-207ENST00000493886 PRNTQ86SH4 94 aa10.76□□□□□ -0.69
VCP-207ENST00000493886 DOPEY1Q5JWR5 2465 aa10.76□□□□□ -0.69
VCP-207ENST00000493886 ABCA2Q9BZC7 2435 aa10.76□□□□□ -0.69
VCP-207ENST00000493886 ZNF207O43670 478 aaKnown RBP10.75□□□□□ -0.69
VCP-207ENST00000493886 FCGR2BP31994 310 aaPredicted RBP10.75□□□□□ -0.69
VCP-207ENST00000493886 HBBP68871 147 aa10.75□□□□□ -0.69
VCP-207ENST00000493886 WIPF2Q8TF74 440 aaPredicted RBP10.75□□□□□ -0.69
VCP-207ENST00000493886 URB1-AS1Q96HZ7 61 aa10.75□□□□□ -0.69
VCP-207ENST00000493886 NAA38Q9BRA0 125 aaKnown RBP10.75□□□□□ -0.69
VCP-207ENST00000493886 MAP1AP78559 2803 aaPredicted RBP10.75□□□□□ -0.69
VCP-207ENST00000493886 OR4F17Q8NGA8 305 aa10.75□□□□□ -0.69
VCP-207ENST00000493886 FMC1Q96HJ9 113 aa10.75□□□□□ -0.69
VCP-207ENST00000493886 TMUB1Q9BVT8 246 aa10.75□□□□□ -0.69
VCP-207ENST00000493886 TRAV8-6A0A0B4J262 113 aa10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms