RNA–Protein interactions for RNA: ENST00000490193.5

USP39-216, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 5

Gene USP39, Length 1,028 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-216ENST00000490193 HIGD1AQ9Y241 93 aa5.59□□□□□ -1.51
USP39-216ENST00000490193 ANKRD20A5PA0PJZ0 165 aa5.58□□□□□ -1.52
USP39-216ENST00000490193 SNURFLB1AK76 121 aa5.58□□□□□ -1.52
USP39-216ENST00000490193 MRPS12O15235 138 aaKnown RBP5.58□□□□□ -1.52
USP39-216ENST00000490193 ATP6V1G1O75348 118 aa5.58□□□□□ -1.52
USP39-216ENST00000490193 MED6O75586 246 aa5.58□□□□□ -1.52
USP39-216ENST00000490193 FUSP35637 526 aaKnown RBP eCLIP5.58□□□□□ -1.52
USP39-216ENST00000490193 RAP2BP61225 183 aa5.58□□□□□ -1.52
USP39-216ENST00000490193 KIR3DS1Q14943 382 aa5.58□□□□□ -1.52
USP39-216ENST00000490193 CTF1Q16619 201 aa5.58□□□□□ -1.52
USP39-216ENST00000490193 CYP2G1PQ6ZSU1 146 aa5.58□□□□□ -1.52
USP39-216ENST00000490193 S100A7AQ86SG5 101 aa5.58□□□□□ -1.52
USP39-216ENST00000490193 CLVS1Q8IUQ0 354 aaPredicted RBP5.58□□□□□ -1.52
USP39-216ENST00000490193 LRTM2Q8N967 370 aa5.58□□□□□ -1.52
USP39-216ENST00000490193 ZNF331Q9NQX6 463 aaPredicted RBP5.58□□□□□ -1.52
USP39-216ENST00000490193 SCP2D1Q9UJQ7 156 aa5.58□□□□□ -1.52
USP39-216ENST00000490193 RNF24Q9Y225 148 aa5.58□□□□□ -1.52
USP39-216ENST00000490193 K7EP13 123 aa5.57□□□□□ -1.52
USP39-216ENST00000490193 SYNGR2O43760 224 aa5.57□□□□□ -1.52
USP39-216ENST00000490193 HYPMO75409 117 aa5.57□□□□□ -1.52
USP39-216ENST00000490193 NXPH4O95158 308 aa5.57□□□□□ -1.52
USP39-216ENST00000490193 SMR3BP02814 79 aaPredicted RBP5.57□□□□□ -1.52
USP39-216ENST00000490193 IL5P05113 134 aa5.57□□□□□ -1.52
USP39-216ENST00000490193 LINC00869P0C866 280 aa5.57□□□□□ -1.52
USP39-216ENST00000490193 DNAH10OSP0CZ25 163 aa5.57□□□□□ -1.52
USP39-216ENST00000490193 SELENOTP62341 195 aa5.57□□□□□ -1.52
USP39-216ENST00000490193 AKR1C1Q04828 323 aa5.57□□□□□ -1.52
USP39-216ENST00000490193 LCN15Q6UWW0 184 aa5.57□□□□□ -1.52
USP39-216ENST00000490193 Q6ZSN1 163 aa5.57□□□□□ -1.52
USP39-216ENST00000490193 Q6ZTI0 123 aa5.57□□□□□ -1.52
USP39-216ENST00000490193 TMED4Q7Z7H5 227 aa5.57□□□□□ -1.52
USP39-216ENST00000490193 LRRC20Q8TCA0 184 aa5.57□□□□□ -1.52
USP39-216ENST00000490193 CHAC2Q8WUX2 184 aa5.57□□□□□ -1.52
USP39-216ENST00000490193 ODF3Q96PU9 254 aa5.57□□□□□ -1.52
USP39-216ENST00000490193 PYGO2Q9BRQ0 406 aa5.57□□□□□ -1.52
USP39-216ENST00000490193 SLC50A1Q9BRV3 221 aa5.57□□□□□ -1.52
USP39-216ENST00000490193 TMEM70Q9BUB7 260 aa5.57□□□□□ -1.52
USP39-216ENST00000490193 MDFICQ9P1T7 246 aa5.57□□□□□ -1.52
USP39-216ENST00000490193 PAIP2BQ9ULR5 123 aaKnown RBP5.57□□□□□ -1.52
USP39-216ENST00000490193 TNFRSF18Q9Y5U5 241 aa5.57□□□□□ -1.52
USP39-216ENST00000490193 HMCN2Q8NDA2 5059 aa5.57□□□□□ -1.52
USP39-216ENST00000490193 PMS2P5A8MQ11 134 aa5.56□□□□□ -1.52
USP39-216ENST00000490193 K7EPK0 472 aa5.56□□□□□ -1.52
USP39-216ENST00000490193 GCSHP23434 173 aa5.56□□□□□ -1.52
USP39-216ENST00000490193 TMEM128Q5BJH2 165 aa5.56□□□□□ -1.52
USP39-216ENST00000490193 CCDC190Q86UF4 302 aa5.56□□□□□ -1.52
USP39-216ENST00000490193 C11orf72Q8NBR9 251 aa5.56□□□□□ -1.52
USP39-216ENST00000490193 PARD6GQ9BYG4 376 aaPredicted RBP5.56□□□□□ -1.52
USP39-216ENST00000490193 TRGV2A0A075B6R0 118 aa5.55□□□□□ -1.52
USP39-216ENST00000490193 TRAV9-2A0A087WT02 112 aa5.55□□□□□ -1.52
USP39-216ENST00000490193 FNDC10F2Z333 226 aa5.55□□□□□ -1.52
USP39-216ENST00000490193 WRBO00258 174 aa5.55□□□□□ -1.52
USP39-216ENST00000490193 RGS5O15539 181 aa5.55□□□□□ -1.52
USP39-216ENST00000490193 ZNF324O75467 553 aaPredicted RBP5.55□□□□□ -1.52
USP39-216ENST00000490193 OR5G3P0C626 314 aa5.55□□□□□ -1.52
USP39-216ENST00000490193 SPANXN5Q5MJ07 72 aa5.55□□□□□ -1.52
USP39-216ENST00000490193 PXDC1Q5TGL8 231 aa5.55□□□□□ -1.52
USP39-216ENST00000490193 PATE2Q6UY27 113 aa5.55□□□□□ -1.52
USP39-216ENST00000490193 ZBTB8BQ8NAP8 495 aaPredicted RBP5.55□□□□□ -1.52
USP39-216ENST00000490193 ZNF680Q8NEM1 530 aa5.55□□□□□ -1.52
USP39-216ENST00000490193 LINC00467Q9BRT7 94 aa5.55□□□□□ -1.52
USP39-216ENST00000490193 NAA50Q9GZZ1 169 aaKnown RBP5.55□□□□□ -1.52
USP39-216ENST00000490193 STRAPQ9Y3F4 350 aaKnown RBP5.55□□□□□ -1.52
USP39-216ENST00000490193 ICOSQ9Y6W8 199 aa5.55□□□□□ -1.52
USP39-216ENST00000490193 DNAH8Q96JB1 4490 aa5.54□□□□□ -1.52
USP39-216ENST00000490193 TRAV12-3A0A0B4J271 114 aa5.54□□□□□ -1.52
USP39-216ENST00000490193 KRTAP29-1A8MX34 341 aaPredicted RBP5.54□□□□□ -1.52
USP39-216ENST00000490193 PRAC2D3DTV9 90 aa5.54□□□□□ -1.52
USP39-216ENST00000490193 NPIPB6E9PJ23 425 aa5.54□□□□□ -1.52
USP39-216ENST00000490193 H3BP45 60 aa5.54□□□□□ -1.52
USP39-216ENST00000490193 CTDSP2O14595 271 aa5.54□□□□□ -1.52
USP39-216ENST00000490193 TSC22D2O75157 780 aa5.54□□□□□ -1.52
USP39-216ENST00000490193 CT45A10P0DMU9 189 aa5.54□□□□□ -1.52
USP39-216ENST00000490193 PRB4P10163 310 aaPredicted RBP5.54□□□□□ -1.52
USP39-216ENST00000490193 LEPP41159 167 aa5.54□□□□□ -1.52
USP39-216ENST00000490193 IL18Q14116 193 aa5.54□□□□□ -1.52
USP39-216ENST00000490193 ANXA2RQ3ZCQ2 193 aa5.54□□□□□ -1.52
USP39-216ENST00000490193 TEPPQ6URK8 271 aa5.54□□□□□ -1.52
USP39-216ENST00000490193 ZNF431Q8TF32 576 aaPredicted RBP5.54□□□□□ -1.52
USP39-216ENST00000490193 SAT2Q96F10 170 aaPredicted RBP5.54□□□□□ -1.52
USP39-216ENST00000490193 ARL6Q9H0F7 186 aa5.54□□□□□ -1.52
USP39-216ENST00000490193 ARV1Q9H2C2 271 aa5.54□□□□□ -1.52
USP39-216ENST00000490193 GSN-AS1Q9NRJ2 163 aa5.54□□□□□ -1.52
USP39-216ENST00000490193 MCUBQ9NWR8 336 aa5.54□□□□□ -1.52
USP39-216ENST00000490193 MSRB1Q9NZV6 116 aa5.54□□□□□ -1.52
USP39-216ENST00000490193 PRO0255Q9UI72 69 aa5.54□□□□□ -1.52
USP39-216ENST00000490193 FUT9Q9Y231 359 aa5.54□□□□□ -1.52
USP39-216ENST00000490193 PXMP4Q9Y6I8 212 aa5.54□□□□□ -1.52
USP39-216ENST00000490193 LY96Q9Y6Y9 160 aa5.54□□□□□ -1.52
USP39-216ENST00000490193 TRAV6A0A075B6T7 132 aa5.53□□□□□ -1.52
USP39-216ENST00000490193 SMCO3A2RU48 225 aa5.53□□□□□ -1.52
USP39-216ENST00000490193 SLC17A3O00476 420 aa5.53□□□□□ -1.52
USP39-216ENST00000490193 SPINK4O60575 86 aa5.53□□□□□ -1.52
USP39-216ENST00000490193 IGLC2P0DOY2 106 aa5.53□□□□□ -1.52
USP39-216ENST00000490193 ANXA7P20073 488 aaKnown RBP5.53□□□□□ -1.52
USP39-216ENST00000490193 TCL1AP56279 114 aa5.53□□□□□ -1.52
USP39-216ENST00000490193 ID3Q02535 119 aa5.53□□□□□ -1.52
USP39-216ENST00000490193 SLAQ13239 276 aa5.53□□□□□ -1.52
USP39-216ENST00000490193 IBA57Q5T440 356 aaKnown RBP5.53□□□□□ -1.52
USP39-216ENST00000490193 LYPD5Q6UWN5 251 aa5.53□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms