RNA–Protein interactions for RNA: ENST00000489794.1

VPS26A-206, Transcript of VPS26, retromer complex component A, humanhuman

TSL 3 BASIC

Gene VPS26A, Length 928 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-206ENST00000489794 ZFC3H1O60293 1989 aaKnown RBP1.98□□□□□ -2.09
VPS26A-206ENST00000489794 FN1P02751 2386 aaKnown RBP1.97□□□□□ -2.09
VPS26A-206ENST00000489794 TRAV14DV4A0A0A6YYC5 116 aa1.97□□□□□ -2.09
VPS26A-206ENST00000489794 hDV103S1A0JD37 113 aa1.97□□□□□ -2.09
VPS26A-206ENST00000489794 CDK6Q00534 326 aa1.97□□□□□ -2.09
VPS26A-206ENST00000489794 HSD17B12Q53GQ0 312 aa1.97□□□□□ -2.09
VPS26A-206ENST00000489794 TMEM14EPQ6UXP3 125 aa1.97□□□□□ -2.09
VPS26A-206ENST00000489794 CLECL1Q8IZS7 167 aa1.97□□□□□ -2.09
VPS26A-206ENST00000489794 SFT2D1Q8WV19 159 aa1.97□□□□□ -2.09
VPS26A-206ENST00000489794 RAB37Q96AX2 223 aa1.97□□□□□ -2.09
VPS26A-206ENST00000489794 HYLS1Q96M11 299 aa1.97□□□□□ -2.09
VPS26A-206ENST00000489794 VPS25Q9BRG1 176 aa1.97□□□□□ -2.09
VPS26A-206ENST00000489794 GGACTQ9BVM4 153 aa1.97□□□□□ -2.09
VPS26A-206ENST00000489794 BANF2Q9H503 90 aa1.97□□□□□ -2.09
VPS26A-206ENST00000489794 TPT1P8Q9HAU6 139 aa1.97□□□□□ -2.09
VPS26A-206ENST00000489794 OR5AC2Q9NZP5 309 aa1.97□□□□□ -2.09
VPS26A-206ENST00000489794 KIAA1107Q9UPP5 1409 aa1.97□□□□□ -2.09
VPS26A-206ENST00000489794 PEG3Q9GZU2 1588 aa1.97□□□□□ -2.09
VPS26A-206ENST00000489794 CCDC171Q6TFL3 1326 aa1.96□□□□□ -2.1
VPS26A-206ENST00000489794 TCRAP04437 139 aa1.96□□□□□ -2.1
VPS26A-206ENST00000489794 TPT1P13693 172 aaKnown RBP1.96□□□□□ -2.1
VPS26A-206ENST00000489794 BRS3P32247 399 aa1.96□□□□□ -2.1
VPS26A-206ENST00000489794 MRPS36P82909 103 aaKnown RBP1.96□□□□□ -2.1
VPS26A-206ENST00000489794 FP248Q71RG6 208 aaPredicted RBP1.96□□□□□ -2.1
VPS26A-206ENST00000489794 CLEC2BQ92478 149 aa1.96□□□□□ -2.1
VPS26A-206ENST00000489794 MUCL1Q96DR8 90 aa1.96□□□□□ -2.1
VPS26A-206ENST00000489794 OR4C12Q96R67 309 aa1.96□□□□□ -2.1
VPS26A-206ENST00000489794 FKBP11Q9NYL4 201 aa1.96□□□□□ -2.1
VPS26A-206ENST00000489794 TPRKBQ9Y3C4 175 aa1.96□□□□□ -2.1
VPS26A-206ENST00000489794 KDM5CP41229 1560 aa1.96□□□□□ -2.1
VPS26A-206ENST00000489794 BAZ2BQ9UIF8 2168 aaKnown RBP1.96□□□□□ -2.1
VPS26A-206ENST00000489794 FREM1Q5H8C1 2179 aa1.95□□□□□ -2.1
VPS26A-206ENST00000489794 CR1P17927 2039 aa1.95□□□□□ -2.1
VPS26A-206ENST00000489794 TCRBV4S1A1TA0A5B7 111 aa1.95□□□□□ -2.1
VPS26A-206ENST00000489794 M0R2Z0 102 aa1.95□□□□□ -2.1
VPS26A-206ENST00000489794 SLC25A5P05141 298 aaKnown RBP1.95□□□□□ -2.1
VPS26A-206ENST00000489794 CD2P06729 351 aa1.95□□□□□ -2.1
VPS26A-206ENST00000489794 EVI2AP22794 236 aa1.95□□□□□ -2.1
VPS26A-206ENST00000489794 DSCR4P56555 118 aaPredicted RBP1.95□□□□□ -2.1
VPS26A-206ENST00000489794 GLYATL3Q5SZD4 288 aa1.95□□□□□ -2.1
VPS26A-206ENST00000489794 COA5Q86WW8 74 aa1.95□□□□□ -2.1
VPS26A-206ENST00000489794 MED12LQ86YW9 2145 aa1.95□□□□□ -2.1
VPS26A-206ENST00000489794 MYLKQ15746 1914 aa1.95□□□□□ -2.1
VPS26A-206ENST00000489794 FANCMQ8IYD8 2048 aa1.95□□□□□ -2.1
VPS26A-206ENST00000489794 COL4A5P29400 1685 aa1.94□□□□□ -2.1
VPS26A-206ENST00000489794 TRAV16A0A0A6YYK6 109 aaPredicted RBP1.94□□□□□ -2.1
VPS26A-206ENST00000489794 TRAV10A0A0B4J240 114 aa1.94□□□□□ -2.1
VPS26A-206ENST00000489794 EFCAB10A6NFE3 127 aa1.94□□□□□ -2.1
VPS26A-206ENST00000489794 C5orf67F2Z3F1 127 aa1.94□□□□□ -2.1
VPS26A-206ENST00000489794 HBDP02042 147 aa1.94□□□□□ -2.1
VPS26A-206ENST00000489794 PRB1P04280 392 aa1.94□□□□□ -2.1
VPS26A-206ENST00000489794 ZNF93P35789 620 aaPredicted RBP1.94□□□□□ -2.1
VPS26A-206ENST00000489794 PDE6HQ13956 83 aa1.94□□□□□ -2.1
VPS26A-206ENST00000489794 ARPINQ7Z6K5 226 aa1.94□□□□□ -2.1
VPS26A-206ENST00000489794 OR4S1Q8NGB4 309 aa1.94□□□□□ -2.1
VPS26A-206ENST00000489794 Q96M85 177 aa1.94□□□□□ -2.1
VPS26A-206ENST00000489794 PAIP2BQ9ULR5 123 aaKnown RBP1.94□□□□□ -2.1
VPS26A-206ENST00000489794 MGAMO43451 1857 aa1.94□□□□□ -2.1
VPS26A-206ENST00000489794 TANC2Q9HCD6 1990 aa1.94□□□□□ -2.1
VPS26A-206ENST00000489794 SYNJ1O43426 1573 aa1.93□□□□□ -2.1
VPS26A-206ENST00000489794 OVOS2A0A0J9YW53 1432 aa1.93□□□□□ -2.1
VPS26A-206ENST00000489794 OVOS2Q6IE36 1432 aa1.93□□□□□ -2.1
VPS26A-206ENST00000489794 CDK5RAP2Q96SN8 1893 aa1.93□□□□□ -2.1
VPS26A-206ENST00000489794 E7EUB6 86 aa1.93□□□□□ -2.1
VPS26A-206ENST00000489794 UQCRQO14949 82 aa1.93□□□□□ -2.1
VPS26A-206ENST00000489794 CIRBPQ14011 172 aaKnown RBP1.93□□□□□ -2.1
VPS26A-206ENST00000489794 CCL4L1Q8NHW4 92 aa1.93□□□□□ -2.1
VPS26A-206ENST00000489794 MAGOHBQ96A72 148 aaKnown RBP1.93□□□□□ -2.1
VPS26A-206ENST00000489794 TNFSF18Q9UNG2 199 aa1.93□□□□□ -2.1
VPS26A-206ENST00000489794 RFX7Q2KHR2 1363 aa1.93□□□□□ -2.1
VPS26A-206ENST00000489794 PCDH15Q96QU1 1955 aa1.92□□□□□ -2.1
VPS26A-206ENST00000489794 TRAV27A0A087WT01 109 aa1.92□□□□□ -2.1
VPS26A-206ENST00000489794 A0A096LPI6 279 aa1.92□□□□□ -2.1
VPS26A-206ENST00000489794 LOC107986453A0A1B0GWG9 222 aa1.92□□□□□ -2.1
VPS26A-206ENST00000489794 C9orf170A2RU37 121 aa1.92□□□□□ -2.1
VPS26A-206ENST00000489794 SMIM24O75264 130 aa1.92□□□□□ -2.1
VPS26A-206ENST00000489794 ERC2-IT1O76042 136 aa1.92□□□□□ -2.1
VPS26A-206ENST00000489794 TRACP01848 142 aa1.92□□□□□ -2.1
VPS26A-206ENST00000489794 DIAPH2-AS1Q14236 149 aa1.92□□□□□ -2.1
VPS26A-206ENST00000489794 HAGHLQ6PII5 290 aaPredicted RBP1.92□□□□□ -2.1
VPS26A-206ENST00000489794 C2orf82Q6UX34 121 aa1.92□□□□□ -2.1
VPS26A-206ENST00000489794 Q6ZRN7 208 aaPredicted RBP1.92□□□□□ -2.1
VPS26A-206ENST00000489794 RPS19BP1Q86WX3 136 aaKnown RBP1.92□□□□□ -2.1
VPS26A-206ENST00000489794 OR5AK2Q8NH90 309 aa1.92□□□□□ -2.1
VPS26A-206ENST00000489794 Q8TAT8 98 aa1.92□□□□□ -2.1
VPS26A-206ENST00000489794 LPAR5Q9H1C0 372 aa1.92□□□□□ -2.1
VPS26A-206ENST00000489794 CRCT1Q9UGL9 99 aa1.92□□□□□ -2.1
VPS26A-206ENST00000489794 CHCHD2Q9Y6H1 151 aaPredicted RBP1.92□□□□□ -2.1
VPS26A-206ENST00000489794 SCN3AQ9NY46 2000 aa1.91□□□□□ -2.1
VPS26A-206ENST00000489794 TRBV6-8A0A0A6YYG3 113 aa1.91□□□□□ -2.1
VPS26A-206ENST00000489794 TRBV6-5A0A0K0K1A5 114 aa1.91□□□□□ -2.1
VPS26A-206ENST00000489794 CCDC160A6NGH7 325 aa1.91□□□□□ -2.1
VPS26A-206ENST00000489794 ZNF727A8MUV8 499 aa1.91□□□□□ -2.1
VPS26A-206ENST00000489794 J3QR89 54 aa1.91□□□□□ -2.1
VPS26A-206ENST00000489794 K7ERU9 68 aa1.91□□□□□ -2.1
VPS26A-206ENST00000489794 GPX1P07203 203 aa1.91□□□□□ -2.1
VPS26A-206ENST00000489794 IGLC6P0CF74 106 aa1.91□□□□□ -2.1
VPS26A-206ENST00000489794 SAA1P0DJI8 122 aaPredicted RBP1.91□□□□□ -2.1
VPS26A-206ENST00000489794 SLC25A4P12235 298 aa1.91□□□□□ -2.1
VPS26A-206ENST00000489794 LSM3P62310 102 aaKnown RBP1.91□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms