RNA–Protein interactions for RNA: ENST00000489419.1

CSMD2-209, Transcript of CUB and Sushi multiple domains 2, humanhuman

TSL 2

Gene CSMD2, Length 2,431 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD2-209ENST00000489419 RNF125Q96EQ8 232 aa6.95□□□□□ -1.3
CSMD2-209ENST00000489419 ZNF331Q9NQX6 463 aaPredicted RBP6.95□□□□□ -1.3
CSMD2-209ENST00000489419 NAT8BQ9UHF3 227 aa6.95□□□□□ -1.3
CSMD2-209ENST00000489419 SMG1Q96Q15 3661 aaKnown RBP6.95□□□□□ -1.3
CSMD2-209ENST00000489419 ZNF462Q96JM2 2506 aa6.95□□□□□ -1.3
CSMD2-209ENST00000489419 TRAV8-6A0A0B4J262 113 aa6.95□□□□□ -1.3
CSMD2-209ENST00000489419 A0A1W2PRD5 423 aa6.95□□□□□ -1.3
CSMD2-209ENST00000489419 A0A1W2PRF3 423 aa6.95□□□□□ -1.3
CSMD2-209ENST00000489419 A0A1W2PRM7 423 aa6.95□□□□□ -1.3
CSMD2-209ENST00000489419 CD24P25063 80 aa6.95□□□□□ -1.3
CSMD2-209ENST00000489419 GNG5P63218 68 aa6.95□□□□□ -1.3
CSMD2-209ENST00000489419 OR10J3Q5JRS4 329 aa6.95□□□□□ -1.3
CSMD2-209ENST00000489419 ATP5L2Q7Z4Y8 100 aa6.95□□□□□ -1.3
CSMD2-209ENST00000489419 PRSS22Q9GZN4 317 aa6.95□□□□□ -1.3
CSMD2-209ENST00000489419 TRBV19A0A075B6N1 114 aa6.94□□□□□ -1.3
CSMD2-209ENST00000489419 FAM231BA6NCW3 169 aa6.94□□□□□ -1.3
CSMD2-209ENST00000489419 UQCRFS1P47985 274 aa6.94□□□□□ -1.3
CSMD2-209ENST00000489419 PDE6HQ13956 83 aa6.94□□□□□ -1.3
CSMD2-209ENST00000489419 Q8N976 141 aa6.94□□□□□ -1.3
CSMD2-209ENST00000489419 Q8N9W7 124 aa6.94□□□□□ -1.3
CSMD2-209ENST00000489419 CMTM2Q8TAZ6 248 aa6.94□□□□□ -1.3
CSMD2-209ENST00000489419 AJUBAQ96IF1 538 aa6.94□□□□□ -1.3
CSMD2-209ENST00000489419 DUX5Q96PT3 197 aa6.94□□□□□ -1.3
CSMD2-209ENST00000489419 NDFIP1Q9BT67 221 aa6.94□□□□□ -1.3
CSMD2-209ENST00000489419 FAM103A1Q9BTL3 118 aaKnown RBP6.94□□□□□ -1.3
CSMD2-209ENST00000489419 C21orf62Q9NYP8 219 aa6.94□□□□□ -1.3
CSMD2-209ENST00000489419 SOX21Q9Y651 276 aaPredicted RBP6.94□□□□□ -1.3
CSMD2-209ENST00000489419 IGHV7-81A0A0B4J1V7 117 aa6.93□□□□□ -1.3
CSMD2-209ENST00000489419 GAGE10A6NGK3 116 aa6.93□□□□□ -1.3
CSMD2-209ENST00000489419 A8MWL6 223 aa6.93□□□□□ -1.3
CSMD2-209ENST00000489419 C19orf84I3L1E1 186 aa6.93□□□□□ -1.3
CSMD2-209ENST00000489419 NUPR1O60356 82 aa6.93□□□□□ -1.3
CSMD2-209ENST00000489419 TPPP2P59282 170 aa6.93□□□□□ -1.3
CSMD2-209ENST00000489419 TMEM256Q8N2U0 113 aa6.93□□□□□ -1.3
CSMD2-209ENST00000489419 FAM168AQ92567 244 aa6.93□□□□□ -1.3
CSMD2-209ENST00000489419 RCHY1Q96PM5 261 aa6.93□□□□□ -1.3
CSMD2-209ENST00000489419 GFRA4Q9GZZ7 299 aa6.93□□□□□ -1.3
CSMD2-209ENST00000489419 C19orf71A6NCJ1 209 aa6.93□□□□□ -1.3
CSMD2-209ENST00000489419 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP6.93□□□□□ -1.3
CSMD2-209ENST00000489419 MRPS12O15235 138 aaKnown RBP6.93□□□□□ -1.3
CSMD2-209ENST00000489419 IL4P05112 153 aa6.93□□□□□ -1.3
CSMD2-209ENST00000489419 EGR2P11161 476 aaPredicted RBP6.93□□□□□ -1.3
CSMD2-209ENST00000489419 NUP35Q8NFH5 326 aa6.93□□□□□ -1.3
CSMD2-209ENST00000489419 NRGNQ92686 78 aa6.93□□□□□ -1.3
CSMD2-209ENST00000489419 BPESC1Q9GZL8 116 aa6.93□□□□□ -1.3
CSMD2-209ENST00000489419 NPFFR1Q9GZQ6 430 aa6.93□□□□□ -1.3
CSMD2-209ENST00000489419 ATRXP46100 2492 aa6.93□□□□□ -1.3
CSMD2-209ENST00000489419 SPTBN4Q9H254 2564 aa6.93□□□□□ -1.3
CSMD2-209ENST00000489419 A0A087WX48 190 aa6.92□□□□□ -1.3
CSMD2-209ENST00000489419 SMAD7O15105 426 aaKnown RBP6.92□□□□□ -1.3
CSMD2-209ENST00000489419 ZNF207O43670 478 aaKnown RBP6.92□□□□□ -1.3
CSMD2-209ENST00000489419 TCL1AP56279 114 aa6.92□□□□□ -1.3
CSMD2-209ENST00000489419 NDPQ00604 133 aa6.92□□□□□ -1.3
CSMD2-209ENST00000489419 KLF17Q5JT82 389 aaPredicted RBP6.92□□□□□ -1.3
CSMD2-209ENST00000489419 BAGE3Q86Y29 109 aa6.92□□□□□ -1.3
CSMD2-209ENST00000489419 TMEM75Q8N9X5 138 aa6.92□□□□□ -1.3
CSMD2-209ENST00000489419 FAM110DQ8TAY7 271 aaPredicted RBP6.92□□□□□ -1.3
CSMD2-209ENST00000489419 RPP21Q9H633 154 aaKnown RBP6.92□□□□□ -1.3
CSMD2-209ENST00000489419 TP53TG3Q9ULZ0 132 aa6.92□□□□□ -1.3
CSMD2-209ENST00000489419 ARHGAP32A7KAX9 2087 aa6.92□□□□□ -1.3
CSMD2-209ENST00000489419 TMEM213A2RRL7 107 aa6.92□□□□□ -1.3
CSMD2-209ENST00000489419 GRIFINA4D1Z8 144 aa6.92□□□□□ -1.3
CSMD2-209ENST00000489419 NPIPB6E9PJ23 425 aa6.92□□□□□ -1.3
CSMD2-209ENST00000489419 F8W735 103 aaPredicted RBP6.92□□□□□ -1.3
CSMD2-209ENST00000489419 NPFFO15130 113 aa6.92□□□□□ -1.3
CSMD2-209ENST00000489419 APCSP02743 223 aa6.92□□□□□ -1.3
CSMD2-209ENST00000489419 FRMD6-AS1P0C7T7 363 aa6.92□□□□□ -1.3
CSMD2-209ENST00000489419 HIST1H1AQ02539 215 aaPredicted RBP6.92□□□□□ -1.3
CSMD2-209ENST00000489419 PAX8Q06710 450 aa6.92□□□□□ -1.3
CSMD2-209ENST00000489419 Q56UQ5 140 aa6.92□□□□□ -1.3
CSMD2-209ENST00000489419 ZNF414Q96IQ9 312 aa6.92□□□□□ -1.3
CSMD2-209ENST00000489419 HIVEP3Q5T1R4 2406 aa6.92□□□□□ -1.3
CSMD2-209ENST00000489419 TMEM189A5PLL7 270 aa6.91□□□□□ -1.3
CSMD2-209ENST00000489419 SMIM9A6NGZ8 99 aa6.91□□□□□ -1.3
CSMD2-209ENST00000489419 IGLV2-11P01706 119 aa6.91□□□□□ -1.3
CSMD2-209ENST00000489419 P01737 135 aa6.91□□□□□ -1.3
CSMD2-209ENST00000489419 IGHV4-39P01824 125 aa6.91□□□□□ -1.3
CSMD2-209ENST00000489419 SAA4P35542 130 aa6.91□□□□□ -1.3
CSMD2-209ENST00000489419 MRPL54Q6P161 138 aaKnown RBP6.91□□□□□ -1.3
CSMD2-209ENST00000489419 SIGLEC15Q6ZMC9 328 aa6.91□□□□□ -1.3
CSMD2-209ENST00000489419 Q86TA4 180 aa6.91□□□□□ -1.3
CSMD2-209ENST00000489419 HSPB9Q9BQS6 159 aa6.91□□□□□ -1.3
CSMD2-209ENST00000489419 NBASA2RRP1 2371 aa6.91□□□□□ -1.3
CSMD2-209ENST00000489419 COL6A6A6NMZ7 2263 aa6.91□□□□□ -1.3
CSMD2-209ENST00000489419 CENPVL3A0A0U1RRI6 287 aa6.91□□□□□ -1.3
CSMD2-209ENST00000489419 HIGD1CA8MV81 97 aa6.91□□□□□ -1.3
CSMD2-209ENST00000489419 BMPR1BO00238 502 aa6.91□□□□□ -1.3
CSMD2-209ENST00000489419 CD5LO43866 347 aa6.91□□□□□ -1.3
CSMD2-209ENST00000489419 SPINK4O60575 86 aa6.91□□□□□ -1.3
CSMD2-209ENST00000489419 SERF1AO75920 110 aa6.91□□□□□ -1.3
CSMD2-209ENST00000489419 OR2J3O76001 311 aa6.91□□□□□ -1.3
CSMD2-209ENST00000489419 CA1P00915 261 aaPredicted RBP6.91□□□□□ -1.3
CSMD2-209ENST00000489419 RPL7P18124 248 aaKnown RBP6.91□□□□□ -1.3
CSMD2-209ENST00000489419 FOXI2Q6ZQN5 318 aa6.91□□□□□ -1.3
CSMD2-209ENST00000489419 ASCL2Q99929 193 aa6.91□□□□□ -1.3
CSMD2-209ENST00000489419 GNB4Q9HAV0 340 aa6.91□□□□□ -1.3
CSMD2-209ENST00000489419 FBXL7Q9UJT9 491 aa6.91□□□□□ -1.3
CSMD2-209ENST00000489419 HRNRQ86YZ3 2850 aaPredicted RBP6.9□□□□□ -1.3
CSMD2-209ENST00000489419 TEX48A0A1B0GUV7 120 aa6.9□□□□□ -1.3
CSMD2-209ENST00000489419 A0A1B0GXF2 115 aa6.9□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms