RNA–Protein interactions for RNA: ENST00000489158.1

EXOSC1-211, Transcript of exosome component 1, humanhuman

TSL 2

Gene EXOSC1, Length 2,113 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC1-211ENST00000489158 CCDC144NLQ6NUI1 221 aa7.11□□□□□ -1.27
EXOSC1-211ENST00000489158 RBPMS2Q6ZRY4 209 aaKnown RBP7.11□□□□□ -1.27
EXOSC1-211ENST00000489158 LINC01356Q8N9X3 169 aa7.11□□□□□ -1.27
EXOSC1-211ENST00000489158 OR4C13Q8NGP0 309 aa7.11□□□□□ -1.27
EXOSC1-211ENST00000489158 OR1B1Q8NGR6 318 aa7.11□□□□□ -1.27
EXOSC1-211ENST00000489158 DAZAP1Q96EP5 407 aaKnown RBP7.11□□□□□ -1.27
EXOSC1-211ENST00000489158 MS4A6AQ9H2W1 248 aa7.11□□□□□ -1.27
EXOSC1-211ENST00000489158 SOX21Q9Y651 276 aaPredicted RBP7.11□□□□□ -1.27
EXOSC1-211ENST00000489158 SVEP1Q4LDE5 3571 aa7.11□□□□□ -1.27
EXOSC1-211ENST00000489158 ABCA2Q9BZC7 2435 aa7.1□□□□□ -1.27
EXOSC1-211ENST00000489158 GAGE12BA1L429 117 aa7.1□□□□□ -1.27
EXOSC1-211ENST00000489158 CGB1A6NKQ9 187 aa7.1□□□□□ -1.27
EXOSC1-211ENST00000489158 CSN3P07498 182 aa7.1□□□□□ -1.27
EXOSC1-211ENST00000489158 GPR183P32249 361 aa7.1□□□□□ -1.27
EXOSC1-211ENST00000489158 THAP8Q8NA92 274 aa7.1□□□□□ -1.27
EXOSC1-211ENST00000489158 VSTM2AQ8TAG5 236 aa7.1□□□□□ -1.27
EXOSC1-211ENST00000489158 SMIM12Q96EX1 92 aa7.1□□□□□ -1.27
EXOSC1-211ENST00000489158 RNF5Q99942 180 aa7.1□□□□□ -1.27
EXOSC1-211ENST00000489158 NDFIP1Q9BT67 221 aa7.1□□□□□ -1.27
EXOSC1-211ENST00000489158 ZNF492Q9P255 531 aa7.1□□□□□ -1.27
EXOSC1-211ENST00000489158 POLQO75417 2590 aa7.1□□□□□ -1.27
EXOSC1-211ENST00000489158 CENPEQ02224 2701 aa7.1□□□□□ -1.27
EXOSC1-211ENST00000489158 RNF223E7ERA6 249 aa7.1□□□□□ -1.27
EXOSC1-211ENST00000489158 J3QLI3 93 aa7.1□□□□□ -1.27
EXOSC1-211ENST00000489158 LTAP01374 205 aa7.1□□□□□ -1.27
EXOSC1-211ENST00000489158 HLA-DRB1P01911 266 aa7.1□□□□□ -1.27
EXOSC1-211ENST00000489158 NBEAP1P0C6P0 100 aa7.1□□□□□ -1.27
EXOSC1-211ENST00000489158 S100A7P31151 101 aa7.1□□□□□ -1.27
EXOSC1-211ENST00000489158 LGALS7P47929 136 aa7.1□□□□□ -1.27
EXOSC1-211ENST00000489158 CT83Q5H943 113 aa7.1□□□□□ -1.27
EXOSC1-211ENST00000489158 RUSC1-AS1Q66K80 236 aa7.1□□□□□ -1.27
EXOSC1-211ENST00000489158 MAPK1IP1LQ8NDC0 245 aa7.1□□□□□ -1.27
EXOSC1-211ENST00000489158 OR4A5Q8NH83 315 aa7.1□□□□□ -1.27
EXOSC1-211ENST00000489158 FMC1Q96HJ9 113 aa7.1□□□□□ -1.27
EXOSC1-211ENST00000489158 HSPB8Q9UJY1 196 aa7.1□□□□□ -1.27
EXOSC1-211ENST00000489158 NAV2Q8IVL1 2488 aa7.09□□□□□ -1.27
EXOSC1-211ENST00000489158 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP7.09□□□□□ -1.27
EXOSC1-211ENST00000489158 A0A1W2PPI3 338 aa7.09□□□□□ -1.27
EXOSC1-211ENST00000489158 SUB1P53999 127 aaKnown RBP eCLIP7.09□□□□□ -1.27
EXOSC1-211ENST00000489158 LINC01545Q5VT33 79 aa7.09□□□□□ -1.27
EXOSC1-211ENST00000489158 STXBP6Q8NFX7 210 aa7.09□□□□□ -1.27
EXOSC1-211ENST00000489158 Q96MF0 132 aa7.09□□□□□ -1.27
EXOSC1-211ENST00000489158 FOXC2Q99958 501 aa7.09□□□□□ -1.27
EXOSC1-211ENST00000489158 GFRA4Q9GZZ7 299 aa7.09□□□□□ -1.27
EXOSC1-211ENST00000489158 PEF1Q9UBV8 284 aaKnown RBP7.09□□□□□ -1.27
EXOSC1-211ENST00000489158 ABCA12Q86UK0 2595 aa7.09□□□□□ -1.27
EXOSC1-211ENST00000489158 MAST4O15021 2626 aa7.09□□□□□ -1.27
EXOSC1-211ENST00000489158 C7orf71A4D174 169 aa7.09□□□□□ -1.28
EXOSC1-211ENST00000489158 INS-IGF2F8WCM5 200 aa7.09□□□□□ -1.28
EXOSC1-211ENST00000489158 TIMM23O14925 209 aa7.09□□□□□ -1.28
EXOSC1-211ENST00000489158 TCRAP04437 139 aa7.09□□□□□ -1.28
EXOSC1-211ENST00000489158 COX8AP10176 69 aa7.09□□□□□ -1.28
EXOSC1-211ENST00000489158 C2orf91Q6ZV80 131 aa7.09□□□□□ -1.28
EXOSC1-211ENST00000489158 KRTAP1-3Q8IUG1 177 aa7.09□□□□□ -1.28
EXOSC1-211ENST00000489158 CIARTQ8N365 385 aaPredicted RBP7.09□□□□□ -1.28
EXOSC1-211ENST00000489158 C5orf17Q8NAS9 161 aa7.09□□□□□ -1.28
EXOSC1-211ENST00000489158 TMEM167AQ8TBQ9 72 aa7.09□□□□□ -1.28
EXOSC1-211ENST00000489158 CSTL1Q9H114 145 aa7.09□□□□□ -1.28
EXOSC1-211ENST00000489158 Q9H3A6 140 aa7.09□□□□□ -1.28
EXOSC1-211ENST00000489158 HIF1ANQ9NWT6 349 aa7.09□□□□□ -1.28
EXOSC1-211ENST00000489158 IGHV3OR16-10A0A075B7F0 116 aa7.08□□□□□ -1.28
EXOSC1-211ENST00000489158 TRAV40A0A0B4J280 105 aa7.08□□□□□ -1.28
EXOSC1-211ENST00000489158 K7ERU9 68 aa7.08□□□□□ -1.28
EXOSC1-211ENST00000489158 HAX1O00165 279 aa7.08□□□□□ -1.28
EXOSC1-211ENST00000489158 NCR2O95944 276 aa7.08□□□□□ -1.28
EXOSC1-211ENST00000489158 IGLC1P0CG04 106 aa7.08□□□□□ -1.28
EXOSC1-211ENST00000489158 HES1Q14469 280 aa7.08□□□□□ -1.28
EXOSC1-211ENST00000489158 VMA21Q3ZAQ7 101 aa7.08□□□□□ -1.28
EXOSC1-211ENST00000489158 Q71RC1 249 aaPredicted RBP7.08□□□□□ -1.28
EXOSC1-211ENST00000489158 BPIFA4PQ86YQ2 179 aa7.08□□□□□ -1.28
EXOSC1-211ENST00000489158 TEX45Q8NA69 505 aa7.08□□□□□ -1.28
EXOSC1-211ENST00000489158 MEGF9Q9H1U4 602 aa7.08□□□□□ -1.28
EXOSC1-211ENST00000489158 CSMD1Q96PZ7 3565 aa7.08□□□□□ -1.28
EXOSC1-211ENST00000489158 TRAV8-1A0A0A6YYK1 113 aa7.07□□□□□ -1.28
EXOSC1-211ENST00000489158 IGHV3-21A0A0B4J1V1 117 aa7.07□□□□□ -1.28
EXOSC1-211ENST00000489158 IGHV1-69DA0A0B4J2H0 117 aa7.07□□□□□ -1.28
EXOSC1-211ENST00000489158 CENPVL3A0A0U1RRI6 287 aa7.07□□□□□ -1.28
EXOSC1-211ENST00000489158 FAM231BA6NCW3 169 aa7.07□□□□□ -1.28
EXOSC1-211ENST00000489158 NPFFO15130 113 aa7.07□□□□□ -1.28
EXOSC1-211ENST00000489158 SLC25A17O43808 307 aa7.07□□□□□ -1.28
EXOSC1-211ENST00000489158 SAP30O75446 220 aa7.07□□□□□ -1.28
EXOSC1-211ENST00000489158 IGHV1-69P01742 117 aa7.07□□□□□ -1.28
EXOSC1-211ENST00000489158 APOHP02749 345 aaPredicted RBP7.07□□□□□ -1.28
EXOSC1-211ENST00000489158 SAA4P35542 130 aa7.07□□□□□ -1.28
EXOSC1-211ENST00000489158 TMEM97Q5BJF2 176 aa7.07□□□□□ -1.28
EXOSC1-211ENST00000489158 CFHR4Q92496 578 aa7.07□□□□□ -1.28
EXOSC1-211ENST00000489158 NAV3Q8IVL0 2385 aa7.07□□□□□ -1.28
EXOSC1-211ENST00000489158 GAGE10A6NGK3 116 aa7.07□□□□□ -1.28
EXOSC1-211ENST00000489158 NPIPB6E9PJ23 425 aa7.07□□□□□ -1.28
EXOSC1-211ENST00000489158 TGFAP01135 160 aa7.07□□□□□ -1.28
EXOSC1-211ENST00000489158 GP9P14770 177 aa7.07□□□□□ -1.28
EXOSC1-211ENST00000489158 PLGLAQ15195 96 aa7.07□□□□□ -1.28
EXOSC1-211ENST00000489158 PRNTQ86SH4 94 aa7.07□□□□□ -1.28
EXOSC1-211ENST00000489158 RITA1Q96K30 269 aa7.07□□□□□ -1.28
EXOSC1-211ENST00000489158 ZNF747Q9BV97 191 aa7.07□□□□□ -1.28
EXOSC1-211ENST00000489158 SELENOKQ9Y6D0 94 aa7.07□□□□□ -1.28
EXOSC1-211ENST00000489158 IGLV2-23P01705 113 aa7.06□□□□□ -1.28
EXOSC1-211ENST00000489158 IGHV4-31P0DP07 118 aa7.06□□□□□ -1.28
EXOSC1-211ENST00000489158 CNTFRP26992 372 aa7.06□□□□□ -1.28
EXOSC1-211ENST00000489158 RIPPLY3P57055 190 aa7.06□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms