RNA–Protein interactions for RNA: ENST00000489048.1

NEB-215, Transcript of nebulin, humanhuman

TSL 1 (best)

Gene NEB, Length 2,738 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEB-215ENST00000489048 NPYP01303 97 aa8.58□□□□□ -1.04
NEB-215ENST00000489048 BMI1P35226 326 aa8.58□□□□□ -1.04
NEB-215ENST00000489048 PRB3Q04118 309 aaPredicted RBP8.58□□□□□ -1.04
NEB-215ENST00000489048 KIR3DS1Q14943 382 aa8.58□□□□□ -1.04
NEB-215ENST00000489048 ZNF575Q86XF7 245 aa8.58□□□□□ -1.04
NEB-215ENST00000489048 FANCD2OSQ96PS1 177 aa8.58□□□□□ -1.04
NEB-215ENST00000489048 FER1L6-AS1Q8NA97 138 aa8.57□□□□□ -1.04
NEB-215ENST00000489048 OR11H6Q8NGC7 330 aa8.57□□□□□ -1.04
NEB-215ENST00000489048 ABHD17AQ96GS6 310 aa8.57□□□□□ -1.04
NEB-215ENST00000489048 CSTL1Q9H114 145 aa8.57□□□□□ -1.04
NEB-215ENST00000489048 ZMAT4Q9H898 229 aa8.57□□□□□ -1.04
NEB-215ENST00000489048 THYN1Q9P016 225 aa8.57□□□□□ -1.04
NEB-215ENST00000489048 EGR2P11161 476 aaPredicted RBP8.57□□□□□ -1.04
NEB-215ENST00000489048 RPL7P18124 248 aaKnown RBP8.57□□□□□ -1.04
NEB-215ENST00000489048 CKS2P33552 79 aa8.57□□□□□ -1.04
NEB-215ENST00000489048 UQCRFS1P47985 274 aa8.57□□□□□ -1.04
NEB-215ENST00000489048 LINC01559Q495D7 138 aa8.57□□□□□ -1.04
NEB-215ENST00000489048 BCL6BQ8N143 479 aaPredicted RBP8.57□□□□□ -1.04
NEB-215ENST00000489048 RNF185Q96GF1 192 aa8.57□□□□□ -1.04
NEB-215ENST00000489048 AP1S3Q96PC3 154 aa8.57□□□□□ -1.04
NEB-215ENST00000489048 TMSB15BA0A087X1C1 80 aa8.56□□□□□ -1.04
NEB-215ENST00000489048 TTC9CQ8N5M4 171 aa8.56□□□□□ -1.04
NEB-215ENST00000489048 CUL9Q8IWT3 2517 aa8.56□□□□□ -1.04
NEB-215ENST00000489048 IGKV2-40A0A087WW87 121 aaPredicted RBP8.56□□□□□ -1.04
NEB-215ENST00000489048 A0A0G2JLM5 398 aa8.56□□□□□ -1.04
NEB-215ENST00000489048 IGKV2D-40P01614 121 aaPredicted RBP8.56□□□□□ -1.04
NEB-215ENST00000489048 OR5A1Q8NGJ0 315 aa8.56□□□□□ -1.04
NEB-215ENST00000489048 HIGD1BQ9P298 99 aa8.56□□□□□ -1.04
NEB-215ENST00000489048 DPM3Q9P2X0 92 aa8.56□□□□□ -1.04
NEB-215ENST00000489048 C5orf64Q2M2E5 130 aa8.55□□□□□ -1.04
NEB-215ENST00000489048 NEGR1Q7Z3B1 354 aa8.55□□□□□ -1.04
NEB-215ENST00000489048 H3BUT2 72 aa8.55□□□□□ -1.04
NEB-215ENST00000489048 IGHG4P01861 327 aa8.55□□□□□ -1.04
NEB-215ENST00000489048 ZNF80P51504 273 aaPredicted RBP8.55□□□□□ -1.04
NEB-215ENST00000489048 TWIST1Q15672 202 aa8.55□□□□□ -1.04
NEB-215ENST00000489048 OR2K2Q8NGT1 345 aa8.55□□□□□ -1.04
NEB-215ENST00000489048 MAP1LC3AQ9H492 121 aa8.55□□□□□ -1.04
NEB-215ENST00000489048 SMG1Q96Q15 3661 aaKnown RBP8.55□□□□□ -1.04
NEB-215ENST00000489048 A0A1W2PPM0 123 aa8.54□□□□□ -1.04
NEB-215ENST00000489048 ODF3BA8MYP8 253 aa8.54□□□□□ -1.04
NEB-215ENST00000489048 SMKR1H3BMG3 65 aa8.54□□□□□ -1.04
NEB-215ENST00000489048 PRB4P10163 310 aaPredicted RBP8.54□□□□□ -1.04
NEB-215ENST00000489048 HLA-DRB4P13762 266 aa8.54□□□□□ -1.04
NEB-215ENST00000489048 FCER1GP30273 86 aa8.54□□□□□ -1.04
NEB-215ENST00000489048 KLF17Q5JT82 389 aaPredicted RBP8.54□□□□□ -1.04
NEB-215ENST00000489048 MEGF9Q9H1U4 602 aa8.54□□□□□ -1.04
NEB-215ENST00000489048 C21orf62Q9NYP8 219 aa8.54□□□□□ -1.04
NEB-215ENST00000489048 SMAD5-AS1Q9Y6J3 95 aa8.54□□□□□ -1.04
NEB-215ENST00000489048 HLA-DRB4X5D2U9 266 aa8.54□□□□□ -1.04
NEB-215ENST00000489048 G3V4G9 280 aa8.54□□□□□ -1.04
NEB-215ENST00000489048 CD3EP07766 207 aa8.54□□□□□ -1.04
NEB-215ENST00000489048 ZNF562Q6V9R5 426 aa8.54□□□□□ -1.04
NEB-215ENST00000489048 PCP2Q8IVA1 136 aa8.54□□□□□ -1.04
NEB-215ENST00000489048 NXT2Q9NPJ8 142 aaKnown RBP8.54□□□□□ -1.04
NEB-215ENST00000489048 DKK2Q9UBU2 259 aa8.54□□□□□ -1.04
NEB-215ENST00000489048 LYNX1G3V0Z9 82 aa8.53□□□□□ -1.04
NEB-215ENST00000489048 SAP30O75446 220 aa8.53□□□□□ -1.04
NEB-215ENST00000489048 LYNX1P0DP58 116 aa8.53□□□□□ -1.04
NEB-215ENST00000489048 FXYD7P58549 80 aa8.53□□□□□ -1.04
NEB-215ENST00000489048 ODF1Q14990 250 aa8.53□□□□□ -1.04
NEB-215ENST00000489048 Q8NA96 180 aa8.53□□□□□ -1.04
NEB-215ENST00000489048 ONECUT1Q9UBC0 465 aa8.53□□□□□ -1.04
NEB-215ENST00000489048 HILPDAQ9Y5L2 63 aa8.53□□□□□ -1.04
NEB-215ENST00000489048 EVI2AP22794 236 aa8.53□□□□□ -1.04
NEB-215ENST00000489048 S100A7P31151 101 aa8.53□□□□□ -1.04
NEB-215ENST00000489048 ARPC1AQ92747 370 aa8.53□□□□□ -1.04
NEB-215ENST00000489048 VGLL1Q99990 258 aa8.53□□□□□ -1.04
NEB-215ENST00000489048 M0R1W7 72 aa8.52□□□□□ -1.04
NEB-215ENST00000489048 SCGB2A1O75556 95 aa8.52□□□□□ -1.04
NEB-215ENST00000489048 NMUP48645 174 aa8.52□□□□□ -1.04
NEB-215ENST00000489048 SMPXQ9UHP9 88 aa8.52□□□□□ -1.04
NEB-215ENST00000489048 HHLA3Q9XRX5 114 aa8.52□□□□□ -1.04
NEB-215ENST00000489048 S4R3C0 116 aa8.52□□□□□ -1.04
NEB-215ENST00000489048 ZGRF1Q86YA3 2104 aa8.52□□□□□ -1.05
NEB-215ENST00000489048 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP8.52□□□□□ -1.05
NEB-215ENST00000489048 RBAKDNA6NC62 111 aa8.52□□□□□ -1.05
NEB-215ENST00000489048 KRTAP21-3Q3LHN1 58 aa8.52□□□□□ -1.05
NEB-215ENST00000489048 Q8N6K4 173 aa8.52□□□□□ -1.05
NEB-215ENST00000489048 PRSS47A8MTI9 375 aa8.52□□□□□ -1.05
NEB-215ENST00000489048 FABP5P3A8MUU1 101 aa8.52□□□□□ -1.05
NEB-215ENST00000489048 SMIM17P0DL12 118 aa8.52□□□□□ -1.05
NEB-215ENST00000489048 NDPQ00604 133 aa8.52□□□□□ -1.05
NEB-215ENST00000489048 TCF15Q12870 199 aa8.52□□□□□ -1.05
NEB-215ENST00000489048 KLK9Q2XQG4 91 aa8.52□□□□□ -1.05
NEB-215ENST00000489048 ZNF672Q499Z4 452 aaPredicted RBP8.52□□□□□ -1.05
NEB-215ENST00000489048 PRSS57Q6UWY2 283 aa8.52□□□□□ -1.05
NEB-215ENST00000489048 Q8TAT8 98 aa8.52□□□□□ -1.05
NEB-215ENST00000489048 KLK9Q9UKQ9 250 aa8.52□□□□□ -1.05
NEB-215ENST00000489048 TNFRSF6BO95407 300 aa8.51□□□□□ -1.05
NEB-215ENST00000489048 CTSGP08311 255 aa8.51□□□□□ -1.05
NEB-215ENST00000489048 LEPP41159 167 aa8.51□□□□□ -1.05
NEB-215ENST00000489048 SH3BGRL2Q9UJC5 107 aa8.51□□□□□ -1.05
NEB-215ENST00000489048 SPCS1Q9Y6A9 102 aa8.51□□□□□ -1.05
NEB-215ENST00000489048 BSNQ9UPA5 3926 aa8.51□□□□□ -1.05
NEB-215ENST00000489048 IGLV2-18A0A075B6J9 118 aa8.51□□□□□ -1.05
NEB-215ENST00000489048 ATP5LO75964 103 aa8.51□□□□□ -1.05
NEB-215ENST00000489048 SMIM13P0DJ93 91 aa8.51□□□□□ -1.05
NEB-215ENST00000489048 EBI3Q14213 229 aa8.51□□□□□ -1.05
NEB-215ENST00000489048 Q8N8P6 123 aa8.51□□□□□ -1.05
NEB-215ENST00000489048 ASPMQ8IZT6 3477 aa8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms