RNA–Protein interactions for RNA: ENST00000489028.1

RFC4-213, Transcript of replication factor C subunit 4, humanhuman

TSL 3

Gene RFC4, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-213ENST00000489028 BATF3Q9NR55 127 aa1□□□□□ -2.25
RFC4-213ENST00000489028 TAS2R7Q9NYW3 318 aa1□□□□□ -2.25
RFC4-213ENST00000489028 TRAPPC2LQ9UL33 140 aa1□□□□□ -2.25
RFC4-213ENST00000489028 TPRKBQ9Y3C4 175 aa1□□□□□ -2.25
RFC4-213ENST00000489028 NUP98P52948 1817 aa1□□□□□ -2.25
RFC4-213ENST00000489028 ADGBQ8N7X0 1667 aa1□□□□□ -2.25
RFC4-213ENST00000489028 TRPM1Q7Z4N2 1603 aa1□□□□□ -2.25
RFC4-213ENST00000489028 KIAA1107Q9UPP5 1409 aa0.99□□□□□ -2.25
RFC4-213ENST00000489028 MED13Q9UHV7 2174 aa0.99□□□□□ -2.25
RFC4-213ENST00000489028 TRAV13-1A0A0B4J241 112 aa0.99□□□□□ -2.25
RFC4-213ENST00000489028 TRBV27A0A0K0K1C4 114 aa0.99□□□□□ -2.25
RFC4-213ENST00000489028 TRBV6-4A0A1B0GX49 114 aa0.99□□□□□ -2.25
RFC4-213ENST00000489028 F8W1H4 67 aa0.99□□□□□ -2.25
RFC4-213ENST00000489028 H3BMG7 143 aa0.99□□□□□ -2.25
RFC4-213ENST00000489028 J3KT08 172 aa0.99□□□□□ -2.25
RFC4-213ENST00000489028 NUPR1O60356 82 aa0.99□□□□□ -2.25
RFC4-213ENST00000489028 ARL14EPLP0DKL9 152 aa0.99□□□□□ -2.25
RFC4-213ENST00000489028 TPT1P13693 172 aaKnown RBP0.99□□□□□ -2.25
RFC4-213ENST00000489028 FABP4P15090 132 aa0.99□□□□□ -2.25
RFC4-213ENST00000489028 COX7CP15954 63 aa0.99□□□□□ -2.25
RFC4-213ENST00000489028 GDF5OSQ5U4N7 250 aa0.99□□□□□ -2.25
RFC4-213ENST00000489028 KRTAP26-1Q6PEX3 210 aa0.99□□□□□ -2.25
RFC4-213ENST00000489028 TMEM14EPQ6UXP3 125 aa0.99□□□□□ -2.25
RFC4-213ENST00000489028 DIRC1Q969H9 104 aa0.99□□□□□ -2.25
RFC4-213ENST00000489028 PRELID3AQ96N28 172 aa0.99□□□□□ -2.25
RFC4-213ENST00000489028 ZFP30Q9Y2G7 519 aa0.99□□□□□ -2.25
RFC4-213ENST00000489028 PIK3C2AO00443 1686 aa0.99□□□□□ -2.25
RFC4-213ENST00000489028 MYOFQ9NZM1 2061 aa0.98□□□□□ -2.25
RFC4-213ENST00000489028 A0A096LPI6 279 aa0.98□□□□□ -2.25
RFC4-213ENST00000489028 H3BRM9 83 aa0.98□□□□□ -2.25
RFC4-213ENST00000489028 LYNX1P0DP58 116 aa0.98□□□□□ -2.25
RFC4-213ENST00000489028 SCGB1A1P11684 91 aa0.98□□□□□ -2.25
RFC4-213ENST00000489028 LSM3P62310 102 aaKnown RBP0.98□□□□□ -2.25
RFC4-213ENST00000489028 VMA21Q3ZAQ7 101 aa0.98□□□□□ -2.25
RFC4-213ENST00000489028 TMEM229BQ8NBD8 167 aa0.98□□□□□ -2.25
RFC4-213ENST00000489028 Q8TAT8 98 aa0.98□□□□□ -2.25
RFC4-213ENST00000489028 ZC2HC1AQ96GY0 325 aa0.98□□□□□ -2.25
RFC4-213ENST00000489028 OR4C12Q96R67 309 aa0.98□□□□□ -2.25
RFC4-213ENST00000489028 TMEM14CQ9P0S9 112 aa0.98□□□□□ -2.25
RFC4-213ENST00000489028 RP1L1Q8IWN7 2480 aaPredicted RBP0.98□□□□□ -2.25
RFC4-213ENST00000489028 A2MP01023 1474 aa0.98□□□□□ -2.25
RFC4-213ENST00000489028 NUP210LQ5VU65 1888 aa0.97□□□□□ -2.25
RFC4-213ENST00000489028 ADGRB2O60241 1585 aa0.97□□□□□ -2.25
RFC4-213ENST00000489028 IGLV3-32A0A0A0MS00 114 aa0.97□□□□□ -2.25
RFC4-213ENST00000489028 A0A1B0GX51 115 aa0.97□□□□□ -2.25
RFC4-213ENST00000489028 C5orf67F2Z3F1 127 aa0.97□□□□□ -2.25
RFC4-213ENST00000489028 DEGS1O15121 323 aa0.97□□□□□ -2.25
RFC4-213ENST00000489028 CCL25O15444 150 aa0.97□□□□□ -2.25
RFC4-213ENST00000489028 DNAL4O96015 105 aa0.97□□□□□ -2.25
RFC4-213ENST00000489028 TRACP01848 142 aa0.97□□□□□ -2.25
RFC4-213ENST00000489028 RPS3P23396 243 aaKnown RBP eCLIP0.97□□□□□ -2.25
RFC4-213ENST00000489028 MAXP61244 160 aa0.97□□□□□ -2.25
RFC4-213ENST00000489028 PSG9Q00887 426 aa0.97□□□□□ -2.25
RFC4-213ENST00000489028 DIAPH2-AS1Q14236 149 aa0.97□□□□□ -2.25
RFC4-213ENST00000489028 OR8I2Q8N0Y5 310 aa0.97□□□□□ -2.25
RFC4-213ENST00000489028 FAM19A2Q8N3H0 131 aa0.97□□□□□ -2.25
RFC4-213ENST00000489028 TEX29Q8N6K0 151 aa0.97□□□□□ -2.25
RFC4-213ENST00000489028 OR5AK2Q8NH90 309 aa0.97□□□□□ -2.25
RFC4-213ENST00000489028 CCL4L1Q8NHW4 92 aa0.97□□□□□ -2.25
RFC4-213ENST00000489028 OBSCN-AS1Q96MR7 158 aa0.97□□□□□ -2.25
RFC4-213ENST00000489028 CST11Q9H112 138 aa0.97□□□□□ -2.25
RFC4-213ENST00000489028 TMEM138Q9NPI0 162 aa0.97□□□□□ -2.25
RFC4-213ENST00000489028 CBLN4Q9NTU7 201 aa0.97□□□□□ -2.25
RFC4-213ENST00000489028 SCN3AQ9NY46 2000 aa0.97□□□□□ -2.25
RFC4-213ENST00000489028 RFX7Q2KHR2 1363 aa0.96□□□□□ -2.26
RFC4-213ENST00000489028 LAMB4A4D0S4 1761 aa0.96□□□□□ -2.26
RFC4-213ENST00000489028 TRAV36DV7A0A075B6V5 113 aa0.96□□□□□ -2.26
RFC4-213ENST00000489028 TRAV16A0A0A6YYK6 109 aaPredicted RBP0.96□□□□□ -2.26
RFC4-213ENST00000489028 BORCS7-ASMTA0A0B4J1R7 106 aa0.96□□□□□ -2.26
RFC4-213ENST00000489028 LOC107984640A0A0U1RRK4 108 aa0.96□□□□□ -2.26
RFC4-213ENST00000489028 C9orf170A2RU37 121 aa0.96□□□□□ -2.26
RFC4-213ENST00000489028 DBIP07108 87 aaKnown RBP0.96□□□□□ -2.26
RFC4-213ENST00000489028 FREM3P0C091 2139 aa0.96□□□□□ -2.26
RFC4-213ENST00000489028 SAA1P0DJI8 122 aaPredicted RBP0.96□□□□□ -2.26
RFC4-213ENST00000489028 ZNF25P17030 456 aaPredicted RBP0.96□□□□□ -2.26
RFC4-213ENST00000489028 CRYGSP22914 178 aa0.96□□□□□ -2.26
RFC4-213ENST00000489028 GTF2A1P52655 376 aaPredicted RBP0.96□□□□□ -2.26
RFC4-213ENST00000489028 ALX1Q15699 326 aa0.96□□□□□ -2.26
RFC4-213ENST00000489028 CCDC153Q494R4 210 aa0.96□□□□□ -2.26
RFC4-213ENST00000489028 HAGHLQ6PII5 290 aaPredicted RBP0.96□□□□□ -2.26
RFC4-213ENST00000489028 LINC00322Q6ZN03 302 aaPredicted RBP0.96□□□□□ -2.26
RFC4-213ENST00000489028 MORN4Q8NDC4 146 aa0.96□□□□□ -2.26
RFC4-213ENST00000489028 ODF3Q96PU9 254 aa0.96□□□□□ -2.26
RFC4-213ENST00000489028 TAF9BQ9HBM6 251 aa0.96□□□□□ -2.26
RFC4-213ENST00000489028 HSPB8Q9UJY1 196 aa0.96□□□□□ -2.26
RFC4-213ENST00000489028 TNFSF18Q9UNG2 199 aa0.96□□□□□ -2.26
RFC4-213ENST00000489028 MYO5AQ9Y4I1 1855 aaKnown RBP0.96□□□□□ -2.26
RFC4-213ENST00000489028 FLG2Q5D862 2391 aaPredicted RBP0.96□□□□□ -2.26
RFC4-213ENST00000489028 FRMPD1Q5SYB0 1578 aa0.96□□□□□ -2.26
RFC4-213ENST00000489028 TCOF1Q13428 1488 aaKnown RBP0.95□□□□□ -2.26
RFC4-213ENST00000489028 LOC107986453A0A1B0GWG9 222 aa0.95□□□□□ -2.26
RFC4-213ENST00000489028 DPM2O94777 84 aa0.95□□□□□ -2.26
RFC4-213ENST00000489028 RPL22P35268 128 aaKnown RBP0.95□□□□□ -2.26
RFC4-213ENST00000489028 OR8B8Q15620 311 aa0.95□□□□□ -2.26
RFC4-213ENST00000489028 GLIPR1L1Q6UWM5 242 aa0.95□□□□□ -2.26
RFC4-213ENST00000489028 FOXI2Q6ZQN5 318 aa0.95□□□□□ -2.26
RFC4-213ENST00000489028 OR5A2Q8NGI9 324 aa0.95□□□□□ -2.26
RFC4-213ENST00000489028 BRK1Q8WUW1 75 aa0.95□□□□□ -2.26
RFC4-213ENST00000489028 NAT14Q8WUY8 206 aa0.95□□□□□ -2.26
RFC4-213ENST00000489028 CLEC2BQ92478 149 aa0.95□□□□□ -2.26
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms