RNA–Protein interactions for RNA: ENST00000488937.1

PRPF4-203, Transcript of pre-mRNA processing factor 4, humanhuman

TSL 3

Gene PRPF4, Length 567 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4-203ENST00000488937 Q6ZS52 159 aa1.95□□□□□ -2.1
PRPF4-203ENST00000488937 PKMYT1Q99640 499 aa1.95□□□□□ -2.1
PRPF4-203ENST00000488937 SNRNP25Q9BV90 132 aaKnown RBP1.95□□□□□ -2.1
PRPF4-203ENST00000488937 SLC35B3Q9H1N7 401 aa1.95□□□□□ -2.1
PRPF4-203ENST00000488937 DUSP21Q9H596 190 aa1.95□□□□□ -2.1
PRPF4-203ENST00000488937 CCDC167Q9P0B6 97 aa1.95□□□□□ -2.1
PRPF4-203ENST00000488937 KLK12Q9UKR0 248 aa1.95□□□□□ -2.1
PRPF4-203ENST00000488937 BOKQ9UMX3 212 aaPredicted RBP1.95□□□□□ -2.1
PRPF4-203ENST00000488937 ZFP30Q9Y2G7 519 aa1.95□□□□□ -2.1
PRPF4-203ENST00000488937 USP54Q70EL1 1684 aa1.95□□□□□ -2.1
PRPF4-203ENST00000488937 ZFYVE16Q7Z3T8 1539 aa1.95□□□□□ -2.1
PRPF4-203ENST00000488937 A2ML1A8K2U0 1454 aa1.94□□□□□ -2.1
PRPF4-203ENST00000488937 MYOM2P54296 1465 aa1.94□□□□□ -2.1
PRPF4-203ENST00000488937 TTC37Q6PGP7 1564 aa1.94□□□□□ -2.1
PRPF4-203ENST00000488937 ZNF609O15014 1411 aa1.94□□□□□ -2.1
PRPF4-203ENST00000488937 IGLV3-16A0A075B6K0 115 aa1.94□□□□□ -2.1
PRPF4-203ENST00000488937 TRAV40A0A0B4J280 105 aa1.94□□□□□ -2.1
PRPF4-203ENST00000488937 A0A1B0GVG6 124 aa1.94□□□□□ -2.1
PRPF4-203ENST00000488937 IFITM5A6NNB3 132 aa1.94□□□□□ -2.1
PRPF4-203ENST00000488937 ODF3BA8MYP8 253 aa1.94□□□□□ -2.1
PRPF4-203ENST00000488937 B4DSR2 109 aa1.94□□□□□ -2.1
PRPF4-203ENST00000488937 CCL25O15444 150 aa1.94□□□□□ -2.1
PRPF4-203ENST00000488937 PSCAO43653 123 aa1.94□□□□□ -2.1
PRPF4-203ENST00000488937 PITX3O75364 302 aa1.94□□□□□ -2.1
PRPF4-203ENST00000488937 CD3DP04234 171 aa1.94□□□□□ -2.1
PRPF4-203ENST00000488937 ZNF705BP0CI00 300 aaPredicted RBP1.94□□□□□ -2.1
PRPF4-203ENST00000488937 FABP4P15090 132 aa1.94□□□□□ -2.1
PRPF4-203ENST00000488937 GUCA1AP43080 201 aaPredicted RBP1.94□□□□□ -2.1
PRPF4-203ENST00000488937 PPP3R1P63098 170 aa1.94□□□□□ -2.1
PRPF4-203ENST00000488937 ASB16-AS1Q495Z4 193 aa1.94□□□□□ -2.1
PRPF4-203ENST00000488937 MEIG1Q5JSS6 88 aa1.94□□□□□ -2.1
PRPF4-203ENST00000488937 ZNF826PQ6ZT77 177 aa1.94□□□□□ -2.1
PRPF4-203ENST00000488937 C10orf111Q8N326 155 aa1.94□□□□□ -2.1
PRPF4-203ENST00000488937 DEDD2Q8WXF8 326 aa1.94□□□□□ -2.1
PRPF4-203ENST00000488937 CHCHD1Q96BP2 118 aaKnown RBP1.94□□□□□ -2.1
PRPF4-203ENST00000488937 PSORS1C2Q9UIG4 136 aa1.94□□□□□ -2.1
PRPF4-203ENST00000488937 LSM2Q9Y333 95 aaKnown RBP1.94□□□□□ -2.1
PRPF4-203ENST00000488937 SMARCA4P51532 1647 aa1.94□□□□□ -2.1
PRPF4-203ENST00000488937 PRDM2Q13029 1718 aa1.94□□□□□ -2.1
PRPF4-203ENST00000488937 TRBV20-1A0A075B6N2 111 aa1.93□□□□□ -2.1
PRPF4-203ENST00000488937 TRAV16A0A0A6YYK6 109 aaPredicted RBP1.93□□□□□ -2.1
PRPF4-203ENST00000488937 A0A0G2JMM0 328 aa1.93□□□□□ -2.1
PRPF4-203ENST00000488937 A0A0J9YX75 114 aa1.93□□□□□ -2.1
PRPF4-203ENST00000488937 A0A1W2PPB8 328 aa1.93□□□□□ -2.1
PRPF4-203ENST00000488937 A6NN06 94 aa1.93□□□□□ -2.1
PRPF4-203ENST00000488937 A8MU10 97 aa1.93□□□□□ -2.1
PRPF4-203ENST00000488937 KIR3DP1A8MWS1 328 aa1.93□□□□□ -2.1
PRPF4-203ENST00000488937 CCDC179H3BU77 68 aa1.93□□□□□ -2.1
PRPF4-203ENST00000488937 CD14P08571 375 aa1.93□□□□□ -2.1
PRPF4-203ENST00000488937 AKAIN1P0CW23 69 aa1.93□□□□□ -2.1
PRPF4-203ENST00000488937 SAA1P0DJI8 122 aaPredicted RBP1.93□□□□□ -2.1
PRPF4-203ENST00000488937 TPT1P13693 172 aaKnown RBP1.93□□□□□ -2.1
PRPF4-203ENST00000488937 HIST1H1BP16401 226 aaKnown RBP1.93□□□□□ -2.1
PRPF4-203ENST00000488937 GNG4P50150 75 aa1.93□□□□□ -2.1
PRPF4-203ENST00000488937 ESRGQ1W209 222 aa1.93□□□□□ -2.1
PRPF4-203ENST00000488937 TEX261Q6UWH6 196 aa1.93□□□□□ -2.1
PRPF4-203ENST00000488937 SLC35E3Q7Z769 313 aa1.93□□□□□ -2.1
PRPF4-203ENST00000488937 KRTAP11-1Q8IUC1 163 aa1.93□□□□□ -2.1
PRPF4-203ENST00000488937 ATOH7Q8N100 152 aa1.93□□□□□ -2.1
PRPF4-203ENST00000488937 Q8N814 137 aa1.93□□□□□ -2.1
PRPF4-203ENST00000488937 PSMF1Q92530 271 aa1.93□□□□□ -2.1
PRPF4-203ENST00000488937 C20orf166-AS1Q96NR2 134 aa1.93□□□□□ -2.1
PRPF4-203ENST00000488937 RETNLBQ9BQ08 111 aa1.93□□□□□ -2.1
PRPF4-203ENST00000488937 HIGD2AQ9BW72 106 aa1.93□□□□□ -2.1
PRPF4-203ENST00000488937 TAS2R4Q9NYW5 299 aa1.93□□□□□ -2.1
PRPF4-203ENST00000488937 METTL1Q9UBP6 276 aaKnown RBP1.93□□□□□ -2.1
PRPF4-203ENST00000488937 BCORL1Q5H9F3 1711 aa1.93□□□□□ -2.1
PRPF4-203ENST00000488937 PZPP20742 1482 aa1.93□□□□□ -2.1
PRPF4-203ENST00000488937 RB1CC1Q8TDY2 1594 aa1.93□□□□□ -2.1
PRPF4-203ENST00000488937 TRPM7Q96QT4 1865 aa1.92□□□□□ -2.1
PRPF4-203ENST00000488937 EML5Q05BV3 1969 aa1.92□□□□□ -2.1
PRPF4-203ENST00000488937 COL11A1P12107 1806 aaPredicted RBP1.92□□□□□ -2.1
PRPF4-203ENST00000488937 TRAV12-2A0A075B6T6 113 aa1.92□□□□□ -2.1
PRPF4-203ENST00000488937 A0A1W2PNM2 257 aa1.92□□□□□ -2.1
PRPF4-203ENST00000488937 SYNGR2O43760 224 aa1.92□□□□□ -2.1
PRPF4-203ENST00000488937 TNFP01375 233 aa1.92□□□□□ -2.1
PRPF4-203ENST00000488937 PYYP10082 97 aa1.92□□□□□ -2.1
PRPF4-203ENST00000488937 SLC25A4P12235 298 aa1.92□□□□□ -2.1
PRPF4-203ENST00000488937 HRES1P13985 223 aa1.92□□□□□ -2.1
PRPF4-203ENST00000488937 LSM3P62310 102 aaKnown RBP1.92□□□□□ -2.1
PRPF4-203ENST00000488937 BLCAPP62952 87 aa1.92□□□□□ -2.1
PRPF4-203ENST00000488937 MOBPQ13875 183 aa1.92□□□□□ -2.1
PRPF4-203ENST00000488937 NUMA1Q14980 2115 aa1.92□□□□□ -2.1
PRPF4-203ENST00000488937 HMGN2P46Q86SG4 172 aa1.92□□□□□ -2.1
PRPF4-203ENST00000488937 ACBD7Q8N6N7 88 aa1.92□□□□□ -2.1
PRPF4-203ENST00000488937 POP5Q969H6 163 aaKnown RBP1.92□□□□□ -2.1
PRPF4-203ENST00000488937 NABP2Q9BQ15 211 aa1.92□□□□□ -2.1
PRPF4-203ENST00000488937 CXCL16Q9H2A7 254 aa1.92□□□□□ -2.1
PRPF4-203ENST00000488937 FKBP11Q9NYL4 201 aa1.92□□□□□ -2.1
PRPF4-203ENST00000488937 PRO0461Q9UI25 63 aa1.92□□□□□ -2.1
PRPF4-203ENST00000488937 RPL26L1Q9UNX3 145 aaKnown RBP1.92□□□□□ -2.1
PRPF4-203ENST00000488937 IER3IP1Q9Y5U9 82 aa1.92□□□□□ -2.1
PRPF4-203ENST00000488937 LAMB2P55268 1798 aa1.92□□□□□ -2.1
PRPF4-203ENST00000488937 SEC16AO15027 2179 aa1.92□□□□□ -2.1
PRPF4-203ENST00000488937 SLIT3O75094 1523 aa1.91□□□□□ -2.1
PRPF4-203ENST00000488937 COL24A1Q17RW2 1714 aa1.91□□□□□ -2.1
PRPF4-203ENST00000488937 SIPA1L2Q9P2F8 1722 aaPredicted RBP1.91□□□□□ -2.1
PRPF4-203ENST00000488937 ANKRD26Q9UPS8 1709 aa1.91□□□□□ -2.1
PRPF4-203ENST00000488937 MICAL3Q7RTP6 2002 aa1.91□□□□□ -2.1
PRPF4-203ENST00000488937 MUC4Q99102 2169 aa1.91□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms