RNA–Protein interactions for RNA: ENST00000488249.1

RBM28-207, Transcript of RNA binding motif protein 28, humanhuman

TSL 3

Gene RBM28, Length 570 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM28-207ENST00000488249 PATE2Q6UY27 113 aa1.97□□□□□ -2.09
RBM28-207ENST00000488249 LINC00299Q6ZSB3 139 aa1.97□□□□□ -2.09
RBM28-207ENST00000488249 KRTAP5-5Q701N2 237 aaPredicted RBP1.97□□□□□ -2.09
RBM28-207ENST00000488249 AMN1Q8IY45 258 aa1.97□□□□□ -2.09
RBM28-207ENST00000488249 ZFAND2AQ8N6M9 145 aa1.97□□□□□ -2.09
RBM28-207ENST00000488249 C3orf56Q8N813 242 aa1.97□□□□□ -2.09
RBM28-207ENST00000488249 C15orf56Q8N910 161 aa1.97□□□□□ -2.09
RBM28-207ENST00000488249 C10orf82Q8WW14 230 aa1.97□□□□□ -2.09
RBM28-207ENST00000488249 S100A13Q99584 98 aa1.97□□□□□ -2.09
RBM28-207ENST00000488249 PKMYT1Q99640 499 aa1.97□□□□□ -2.09
RBM28-207ENST00000488249 C11orf1Q9H5F2 150 aa1.97□□□□□ -2.09
RBM28-207ENST00000488249 ASF1BQ9NVP2 202 aa1.97□□□□□ -2.09
RBM28-207ENST00000488249 KLK12Q9UKR0 248 aa1.97□□□□□ -2.09
RBM28-207ENST00000488249 RPL26L1Q9UNX3 145 aaKnown RBP1.97□□□□□ -2.09
RBM28-207ENST00000488249 PIKFYVEQ9Y2I7 2098 aa1.97□□□□□ -2.09
RBM28-207ENST00000488249 CHD3Q12873 2000 aaKnown RBP1.96□□□□□ -2.09
RBM28-207ENST00000488249 SIPA1L1O43166 1804 aa1.96□□□□□ -2.1
RBM28-207ENST00000488249 NUP98P52948 1817 aa1.96□□□□□ -2.1
RBM28-207ENST00000488249 PXDNLA1KZ92 1463 aa1.96□□□□□ -2.1
RBM28-207ENST00000488249 ADGRL1O94910 1474 aa1.96□□□□□ -2.1
RBM28-207ENST00000488249 IGLV11-55A0A075B6I3 123 aa1.96□□□□□ -2.1
RBM28-207ENST00000488249 IGLV3-9A0A075B6K5 115 aa1.96□□□□□ -2.1
RBM28-207ENST00000488249 TRAV16A0A0A6YYK6 109 aaPredicted RBP1.96□□□□□ -2.1
RBM28-207ENST00000488249 A0A0D9SG52 128 aa1.96□□□□□ -2.1
RBM28-207ENST00000488249 RBAKDNA6NC62 111 aa1.96□□□□□ -2.1
RBM28-207ENST00000488249 A8MWP4 228 aa1.96□□□□□ -2.1
RBM28-207ENST00000488249 K7ERS5 55 aa1.96□□□□□ -2.1
RBM28-207ENST00000488249 BPY2O14599 106 aa1.96□□□□□ -2.1
RBM28-207ENST00000488249 NDUFB6O95139 128 aa1.96□□□□□ -2.1
RBM28-207ENST00000488249 IGHV3-7P01780 117 aa1.96□□□□□ -2.1
RBM28-207ENST00000488249 GYPBP06028 91 aa1.96□□□□□ -2.1
RBM28-207ENST00000488249 IGHV1-8P0DP01 117 aa1.96□□□□□ -2.1
RBM28-207ENST00000488249 CCL5P13501 91 aa1.96□□□□□ -2.1
RBM28-207ENST00000488249 SS18Q15532 418 aa1.96□□□□□ -2.1
RBM28-207ENST00000488249 SPRNQ5BIV9 151 aa1.96□□□□□ -2.1
RBM28-207ENST00000488249 FAM78AQ5JUQ0 283 aa1.96□□□□□ -2.1
RBM28-207ENST00000488249 ZFP2Q6ZN57 461 aa1.96□□□□□ -2.1
RBM28-207ENST00000488249 SIGLECL1Q8N7X8 197 aa1.96□□□□□ -2.1
RBM28-207ENST00000488249 CIRBP-AS1Q8TBR5 109 aa1.96□□□□□ -2.1
RBM28-207ENST00000488249 C10orf105Q8TEF2 133 aa1.96□□□□□ -2.1
RBM28-207ENST00000488249 MRPS24Q96EL2 167 aaKnown RBP1.96□□□□□ -2.1
RBM28-207ENST00000488249 DSCR8Q96T75 97 aa1.96□□□□□ -2.1
RBM28-207ENST00000488249 UPK3BQ9BT76 320 aa1.96□□□□□ -2.1
RBM28-207ENST00000488249 CHCHD7Q9BUK0 85 aa1.96□□□□□ -2.1
RBM28-207ENST00000488249 GABARAPL1Q9H0R8 117 aa1.96□□□□□ -2.1
RBM28-207ENST00000488249 XAGE1AQ9HD64 81 aa1.96□□□□□ -2.1
RBM28-207ENST00000488249 SMCO4Q9NRQ5 59 aa1.96□□□□□ -2.1
RBM28-207ENST00000488249 TPRKBQ9Y3C4 175 aa1.96□□□□□ -2.1
RBM28-207ENST00000488249 MAGI3Q5TCQ9 1506 aa1.96□□□□□ -2.1
RBM28-207ENST00000488249 ANAPC1Q9H1A4 1944 aa1.95□□□□□ -2.1
RBM28-207ENST00000488249 INO80Q9ULG1 1556 aaPredicted RBP1.95□□□□□ -2.1
RBM28-207ENST00000488249 ABCC5O15440 1437 aa1.95□□□□□ -2.1
RBM28-207ENST00000488249 A6NED7 52 aa1.95□□□□□ -2.1
RBM28-207ENST00000488249 FAM24AA6NFZ4 105 aa1.95□□□□□ -2.1
RBM28-207ENST00000488249 ZNF737O75373 536 aa1.95□□□□□ -2.1
RBM28-207ENST00000488249 UBL3O95164 117 aa1.95□□□□□ -2.1
RBM28-207ENST00000488249 INSP01308 110 aa1.95□□□□□ -2.1
RBM28-207ENST00000488249 IGKV1D-33P01593 117 aa1.95□□□□□ -2.1
RBM28-207ENST00000488249 IGKV1-33P01594 117 aa1.95□□□□□ -2.1
RBM28-207ENST00000488249 HLA-DQA1P01909 254 aa1.95□□□□□ -2.1
RBM28-207ENST00000488249 TRGV3P03979 118 aa1.95□□□□□ -2.1
RBM28-207ENST00000488249 IGHV3-30-3P0DP02 117 aa1.95□□□□□ -2.1
RBM28-207ENST00000488249 SLC25A4P12235 298 aa1.95□□□□□ -2.1
RBM28-207ENST00000488249 PTHLHP12272 177 aa1.95□□□□□ -2.1
RBM28-207ENST00000488249 FUSP35637 526 aaKnown RBP eCLIP1.95□□□□□ -2.1
RBM28-207ENST00000488249 PCBD1P61457 104 aa1.95□□□□□ -2.1
RBM28-207ENST00000488249 NPC2P61916 151 aa1.95□□□□□ -2.1
RBM28-207ENST00000488249 BLCAPP62952 87 aa1.95□□□□□ -2.1
RBM28-207ENST00000488249 CDK5R1Q15078 307 aa1.95□□□□□ -2.1
RBM28-207ENST00000488249 NOXRED1Q6NXP6 359 aa1.95□□□□□ -2.1
RBM28-207ENST00000488249 NTM-AS1Q6ZSK4 140 aa1.95□□□□□ -2.1
RBM28-207ENST00000488249 FP248Q71RG6 208 aaPredicted RBP1.95□□□□□ -2.1
RBM28-207ENST00000488249 OR5AS1Q8N127 324 aa1.95□□□□□ -2.1
RBM28-207ENST00000488249 FAM216BQ8N7L0 139 aa1.95□□□□□ -2.1
RBM28-207ENST00000488249 CNEP1R1Q8N9A8 125 aa1.95□□□□□ -2.1
RBM28-207ENST00000488249 LINC00301Q8NCQ3 95 aa1.95□□□□□ -2.1
RBM28-207ENST00000488249 ATP6V0E2Q8NHE4 81 aa1.95□□□□□ -2.1
RBM28-207ENST00000488249 CLDND2Q8NHS1 167 aa1.95□□□□□ -2.1
RBM28-207ENST00000488249 S100ZQ8WXG8 99 aa1.95□□□□□ -2.1
RBM28-207ENST00000488249 SCGB3A1Q96QR1 104 aa1.95□□□□□ -2.1
RBM28-207ENST00000488249 RPP21Q9H633 154 aaKnown RBP1.95□□□□□ -2.1
RBM28-207ENST00000488249 UQCR10Q9UDW1 63 aa1.95□□□□□ -2.1
RBM28-207ENST00000488249 HHLA3Q9XRX5 114 aa1.95□□□□□ -2.1
RBM28-207ENST00000488249 KIF21AQ7Z4S6 1674 aa1.95□□□□□ -2.1
RBM28-207ENST00000488249 ROBO1Q9Y6N7 1651 aa1.95□□□□□ -2.1
RBM28-207ENST00000488249 HELZP42694 1942 aaKnown RBP1.95□□□□□ -2.1
RBM28-207ENST00000488249 TMEM131LA2VDJ0 1609 aa1.95□□□□□ -2.1
RBM28-207ENST00000488249 ARHGEF28Q8N1W1 1705 aaKnown RBP1.94□□□□□ -2.1
RBM28-207ENST00000488249 DIP2BQ9P265 1576 aa1.94□□□□□ -2.1
RBM28-207ENST00000488249 SBF2Q86WG5 1849 aa1.94□□□□□ -2.1
RBM28-207ENST00000488249 CASKIN1Q8WXD9 1431 aa1.94□□□□□ -2.1
RBM28-207ENST00000488249 IGLV3-16A0A075B6K0 115 aa1.94□□□□□ -2.1
RBM28-207ENST00000488249 IGLC7A0M8Q6 106 aa1.94□□□□□ -2.1
RBM28-207ENST00000488249 C19orf71A6NCJ1 209 aa1.94□□□□□ -2.1
RBM28-207ENST00000488249 LECT2O14960 151 aa1.94□□□□□ -2.1
RBM28-207ENST00000488249 SLC25A20O43772 301 aa1.94□□□□□ -2.1
RBM28-207ENST00000488249 SNCGO76070 127 aa1.94□□□□□ -2.1
RBM28-207ENST00000488249 SFT2D2O95562 160 aa1.94□□□□□ -2.1
RBM28-207ENST00000488249 CYB5AP00167 134 aa1.94□□□□□ -2.1
RBM28-207ENST00000488249 SLC25A6P12236 298 aa1.94□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms