RNA–Protein interactions for RNA: ENST00000487709.1

HMGB1P36-201, Transcript of high mobility group box 1 pseudogene 36, humanhuman

BASIC

Gene HMGB1P36, Length 576 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P36-201ENST00000487709 PIK3C2AO00443 1686 aa1.27□□□□□ -2.21
HMGB1P36-201ENST00000487709 KIAA1107Q9UPP5 1409 aa1.27□□□□□ -2.21
HMGB1P36-201ENST00000487709 LOC107986453A0A1B0GWG9 222 aa1.27□□□□□ -2.21
HMGB1P36-201ENST00000487709 hDV103S1A0JD37 113 aa1.27□□□□□ -2.21
HMGB1P36-201ENST00000487709 CCDC160A6NGH7 325 aa1.27□□□□□ -2.21
HMGB1P36-201ENST00000487709 NCR2O95944 276 aa1.27□□□□□ -2.21
HMGB1P36-201ENST00000487709 TCRAP04437 139 aa1.27□□□□□ -2.21
HMGB1P36-201ENST00000487709 SAA1P0DJI8 122 aaPredicted RBP1.27□□□□□ -2.21
HMGB1P36-201ENST00000487709 KDELR1P24390 212 aa1.27□□□□□ -2.21
HMGB1P36-201ENST00000487709 SSR2P43308 183 aa1.27□□□□□ -2.21
HMGB1P36-201ENST00000487709 ROMO1P60602 79 aa1.27□□□□□ -2.21
HMGB1P36-201ENST00000487709 SELENOWP63302 87 aa1.27□□□□□ -2.21
HMGB1P36-201ENST00000487709 QRFPP83859 136 aa1.27□□□□□ -2.21
HMGB1P36-201ENST00000487709 CDK6Q00534 326 aa1.27□□□□□ -2.21
HMGB1P36-201ENST00000487709 HAGHLQ6PII5 290 aaPredicted RBP1.27□□□□□ -2.21
HMGB1P36-201ENST00000487709 C2orf82Q6UX34 121 aa1.27□□□□□ -2.21
HMGB1P36-201ENST00000487709 FP248Q71RG6 208 aaPredicted RBP1.27□□□□□ -2.21
HMGB1P36-201ENST00000487709 CTAGE3PQ8IX95 158 aa1.27□□□□□ -2.21
HMGB1P36-201ENST00000487709 OR5D14Q8NGL3 314 aa1.27□□□□□ -2.21
HMGB1P36-201ENST00000487709 C10orf105Q8TEF2 133 aa1.27□□□□□ -2.21
HMGB1P36-201ENST00000487709 MUCL1Q96DR8 90 aa1.27□□□□□ -2.21
HMGB1P36-201ENST00000487709 HYLS1Q96M11 299 aa1.27□□□□□ -2.21
HMGB1P36-201ENST00000487709 Q96M85 177 aa1.27□□□□□ -2.21
HMGB1P36-201ENST00000487709 TP53RKQ96S44 253 aa1.27□□□□□ -2.21
HMGB1P36-201ENST00000487709 CGREF1Q99674 301 aa1.27□□□□□ -2.21
HMGB1P36-201ENST00000487709 ERG28Q9UKR5 140 aa1.27□□□□□ -2.21
HMGB1P36-201ENST00000487709 SCN10AQ9Y5Y9 1956 aa1.27□□□□□ -2.21
HMGB1P36-201ENST00000487709 MAST2Q6P0Q8 1798 aa1.26□□□□□ -2.21
HMGB1P36-201ENST00000487709 DLC1Q96QB1 1528 aa1.26□□□□□ -2.21
HMGB1P36-201ENST00000487709 NISCHQ9Y2I1 1504 aa1.26□□□□□ -2.21
HMGB1P36-201ENST00000487709 TCOF1Q13428 1488 aaKnown RBP1.26□□□□□ -2.21
HMGB1P36-201ENST00000487709 RFX7Q2KHR2 1363 aa1.26□□□□□ -2.21
HMGB1P36-201ENST00000487709 IGKV3-7A0A075B6H7 116 aa1.26□□□□□ -2.21
HMGB1P36-201ENST00000487709 TRAV27A0A087WT01 109 aa1.26□□□□□ -2.21
HMGB1P36-201ENST00000487709 TRAV12-1A0A0B4J245 112 aa1.26□□□□□ -2.21
HMGB1P36-201ENST00000487709 FAM92AA1XBS5 289 aa1.26□□□□□ -2.21
HMGB1P36-201ENST00000487709 HBDP02042 147 aa1.26□□□□□ -2.21
HMGB1P36-201ENST00000487709 SLC25A5P05141 298 aaKnown RBP1.26□□□□□ -2.21
HMGB1P36-201ENST00000487709 TSPAN19P0C672 248 aa1.26□□□□□ -2.21
HMGB1P36-201ENST00000487709 HIST1H1BP16401 226 aaKnown RBP1.26□□□□□ -2.21
HMGB1P36-201ENST00000487709 DNAJB13P59910 316 aa1.26□□□□□ -2.21
HMGB1P36-201ENST00000487709 COPZ1P61923 177 aa1.26□□□□□ -2.21
HMGB1P36-201ENST00000487709 RPS25P62851 125 aaKnown RBP1.26□□□□□ -2.21
HMGB1P36-201ENST00000487709 CIRBPQ14011 172 aaKnown RBP1.26□□□□□ -2.21
HMGB1P36-201ENST00000487709 ZNF846Q147U1 533 aa1.26□□□□□ -2.21
HMGB1P36-201ENST00000487709 Q1T7F1 81 aa1.26□□□□□ -2.21
HMGB1P36-201ENST00000487709 GLYATL3Q5SZD4 288 aa1.26□□□□□ -2.21
HMGB1P36-201ENST00000487709 LINC00311Q8N616 119 aa1.26□□□□□ -2.21
HMGB1P36-201ENST00000487709 OR5AK2Q8NH90 309 aa1.26□□□□□ -2.21
HMGB1P36-201ENST00000487709 SFT2D1Q8WV19 159 aa1.26□□□□□ -2.21
HMGB1P36-201ENST00000487709 ARL11Q969Q4 196 aa1.26□□□□□ -2.21
HMGB1P36-201ENST00000487709 LPAR5Q9H1C0 372 aa1.26□□□□□ -2.21
HMGB1P36-201ENST00000487709 TAF9BQ9HBM6 251 aa1.26□□□□□ -2.21
HMGB1P36-201ENST00000487709 NIT2Q9NQR4 276 aa1.26□□□□□ -2.21
HMGB1P36-201ENST00000487709 TNFSF18Q9UNG2 199 aa1.26□□□□□ -2.21
HMGB1P36-201ENST00000487709 PTPRBP23467 1997 aa1.26□□□□□ -2.21
HMGB1P36-201ENST00000487709 HELZ2Q9BYK8 2649 aaKnown RBP1.26□□□□□ -2.21
HMGB1P36-201ENST00000487709 ECM29Q5VYK3 1845 aa1.26□□□□□ -2.21
HMGB1P36-201ENST00000487709 TRPM1Q7Z4N2 1603 aa1.26□□□□□ -2.21
HMGB1P36-201ENST00000487709 ARHGEF11O15085 1522 aa1.25□□□□□ -2.21
HMGB1P36-201ENST00000487709 FAM135BQ49AJ0 1406 aa1.25□□□□□ -2.21
HMGB1P36-201ENST00000487709 IGKV2D-26A0A0A0MRZ7 120 aa1.25□□□□□ -2.21
HMGB1P36-201ENST00000487709 TRAV14DV4A0A0A6YYC5 116 aa1.25□□□□□ -2.21
HMGB1P36-201ENST00000487709 PNMA8CA0A1B0GUJ8 204 aa1.25□□□□□ -2.21
HMGB1P36-201ENST00000487709 TCRBV4S1A1TA0A5B7 111 aa1.25□□□□□ -2.21
HMGB1P36-201ENST00000487709 E7EUB6 86 aa1.25□□□□□ -2.21
HMGB1P36-201ENST00000487709 MRPS14O60783 128 aaKnown RBP1.25□□□□□ -2.21
HMGB1P36-201ENST00000487709 TRACP01848 142 aa1.25□□□□□ -2.21
HMGB1P36-201ENST00000487709 APOC1P02654 83 aa1.25□□□□□ -2.21
HMGB1P36-201ENST00000487709 RBP4P02753 201 aa1.25□□□□□ -2.21
HMGB1P36-201ENST00000487709 IGLC6P0CF74 106 aa1.25□□□□□ -2.21
HMGB1P36-201ENST00000487709 HLA-DRB4P13762 266 aa1.25□□□□□ -2.21
HMGB1P36-201ENST00000487709 S100A1P23297 94 aa1.25□□□□□ -2.21
HMGB1P36-201ENST00000487709 BRS3P32247 399 aa1.25□□□□□ -2.21
HMGB1P36-201ENST00000487709 AKR1D1P51857 326 aa1.25□□□□□ -2.21
HMGB1P36-201ENST00000487709 DSCR4P56555 118 aaPredicted RBP1.25□□□□□ -2.21
HMGB1P36-201ENST00000487709 RRAS2P62070 204 aaPredicted RBP1.25□□□□□ -2.21
HMGB1P36-201ENST00000487709 WHAMMP3Q1A5X7 153 aa1.25□□□□□ -2.21
HMGB1P36-201ENST00000487709 C1orf134Q5TEV5 83 aa1.25□□□□□ -2.21
HMGB1P36-201ENST00000487709 GLIPR1L1Q6UWM5 242 aa1.25□□□□□ -2.21
HMGB1P36-201ENST00000487709 ARPINQ7Z6K5 226 aa1.25□□□□□ -2.21
HMGB1P36-201ENST00000487709 Q8N814 137 aa1.25□□□□□ -2.21
HMGB1P36-201ENST00000487709 C9orf163Q8N9P6 203 aa1.25□□□□□ -2.21
HMGB1P36-201ENST00000487709 OR10AC1Q8NH08 325 aa1.25□□□□□ -2.21
HMGB1P36-201ENST00000487709 ZNF431Q8TF32 576 aaPredicted RBP1.25□□□□□ -2.21
HMGB1P36-201ENST00000487709 C4orf3Q8WVX3 66 aa1.25□□□□□ -2.21
HMGB1P36-201ENST00000487709 CLEC2BQ92478 149 aa1.25□□□□□ -2.21
HMGB1P36-201ENST00000487709 RAB37Q96AX2 223 aa1.25□□□□□ -2.21
HMGB1P36-201ENST00000487709 SNURFQ9Y675 71 aa1.25□□□□□ -2.21
HMGB1P36-201ENST00000487709 HLA-DRB4X5D2U9 266 aa1.25□□□□□ -2.21
HMGB1P36-201ENST00000487709 ARHGEF28Q8N1W1 1705 aaKnown RBP1.25□□□□□ -2.21
HMGB1P36-201ENST00000487709 SMARCA4P51532 1647 aa1.25□□□□□ -2.21
HMGB1P36-201ENST00000487709 DOCK3Q8IZD9 2030 aa1.25□□□□□ -2.21
HMGB1P36-201ENST00000487709 BICRAQ9NZM4 1560 aa1.25□□□□□ -2.21
HMGB1P36-201ENST00000487709 WDR90Q96KV7 1748 aa1.24□□□□□ -2.21
HMGB1P36-201ENST00000487709 A0A1B0GV90 55 aa1.24□□□□□ -2.21
HMGB1P36-201ENST00000487709 ZNF727A8MUV8 499 aa1.24□□□□□ -2.21
HMGB1P36-201ENST00000487709 FAM25AB3EWG3 89 aa1.24□□□□□ -2.21
HMGB1P36-201ENST00000487709 FAM25CB3EWG5 89 aa1.24□□□□□ -2.21
HMGB1P36-201ENST00000487709 FAM25GB3EWG6 89 aa1.24□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms