RNA–Protein interactions for RNA: ENST00000487565.5

GARNL3-218, Transcript of GTPase activating Rap/RanGAP domain like 3, human

TSL 4

Gene GARNL3, Length 554 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
GARNL3-218	ENST00000487565	IGLC2	P0DOY2	106 aa		5.76	□□□□□ -1.49
GARNL3-218	ENST00000487565	HIST1H1E	P10412	219 aa	Known RBP	5.76	□□□□□ -1.49
GARNL3-218	ENST00000487565	INSL3	P51460	131 aa		5.76	□□□□□ -1.49
GARNL3-218	ENST00000487565	IFITM2	Q01629	132 aa		5.76	□□□□□ -1.49
GARNL3-218	ENST00000487565	FOXI1	Q12951	378 aa		5.76	□□□□□ -1.49
GARNL3-218	ENST00000487565	GUK1	Q16774	197 aa		5.76	□□□□□ -1.49
GARNL3-218	ENST00000487565	DEFB114	Q30KQ6	69 aa		5.76	□□□□□ -1.49
GARNL3-218	ENST00000487565	CD300E	Q496F6	205 aa	Predicted RBP	5.76	□□□□□ -1.49
GARNL3-218	ENST00000487565	LCN12	Q6JVE5	192 aa		5.76	□□□□□ -1.49
GARNL3-218	ENST00000487565	TMEM61	Q8N0U2	210 aa		5.76	□□□□□ -1.49
GARNL3-218	ENST00000487565	SPATA3	Q8NHX4	192 aa		5.76	□□□□□ -1.49
GARNL3-218	ENST00000487565	MBD3L1	Q8WWY6	194 aa		5.76	□□□□□ -1.49
GARNL3-218	ENST00000487565	NRN1	Q9NPD7	142 aa		5.76	□□□□□ -1.49
GARNL3-218	ENST00000487565	TRAV1-1	A0A0B4J248	108 aa		5.75	□□□□□ -1.49
GARNL3-218	ENST00000487565	OR4C46	A6NHA9	309 aa		5.75	□□□□□ -1.49
GARNL3-218	ENST00000487565	DNASE2	O00115	360 aa	Predicted RBP	5.75	□□□□□ -1.49
GARNL3-218	ENST00000487565	TSPAN4	O14817	238 aa		5.75	□□□□□ -1.49
GARNL3-218	ENST00000487565	MRPS12	O15235	138 aa	Known RBP	5.75	□□□□□ -1.49
GARNL3-218	ENST00000487565	IGLV1-51	P01701	117 aa		5.75	□□□□□ -1.49
GARNL3-218	ENST00000487565	NMB	P08949	121 aa		5.75	□□□□□ -1.49
GARNL3-218	ENST00000487565	SNRPC	P09234	159 aa	Known RBP	5.75	□□□□□ -1.49
GARNL3-218	ENST00000487565	IGLL1	P15814	213 aa		5.75	□□□□□ -1.49
GARNL3-218	ENST00000487565	TFPI2	P48307	235 aa		5.75	□□□□□ -1.49
GARNL3-218	ENST00000487565	PSMB3	P49720	205 aa		5.75	□□□□□ -1.49
GARNL3-218	ENST00000487565	PPT1	P50897	306 aa		5.75	□□□□□ -1.49
GARNL3-218	ENST00000487565	PAFAH1B2	P68402	229 aa		5.75	□□□□□ -1.49
GARNL3-218	ENST00000487565	PDE6H	Q13956	83 aa		5.75	□□□□□ -1.49
GARNL3-218	ENST00000487565	GUCA2B	Q16661	112 aa		5.75	□□□□□ -1.49
GARNL3-218	ENST00000487565	UNQ5830/PRO19650/PRO19816	Q6UY13	95 aa		5.75	□□□□□ -1.49
GARNL3-218	ENST00000487565	WFDC9	Q8NEX5	89 aa		5.75	□□□□□ -1.49
GARNL3-218	ENST00000487565	BLNK	Q8WV28	456 aa		5.75	□□□□□ -1.49
GARNL3-218	ENST00000487565	PCNP	Q8WW12	178 aa	Known RBP	5.75	□□□□□ -1.49
GARNL3-218	ENST00000487565	FXYD5	Q96DB9	178 aa		5.75	□□□□□ -1.49
GARNL3-218	ENST00000487565	SPAG8	Q99932	426 aa	Predicted RBP	5.75	□□□□□ -1.49
GARNL3-218	ENST00000487565	SLC50A1	Q9BRV3	221 aa		5.75	□□□□□ -1.49
GARNL3-218	ENST00000487565	HRH4	Q9H3N8	390 aa		5.75	□□□□□ -1.49
GARNL3-218	ENST00000487565	MANBAL	Q9NQG1	85 aa		5.75	□□□□□ -1.49
GARNL3-218	ENST00000487565	GNG13	Q9P2W3	67 aa		5.75	□□□□□ -1.49
GARNL3-218	ENST00000487565	TRBV19	A0A075B6N1	114 aa		5.74	□□□□□ -1.49
GARNL3-218	ENST00000487565	TRAV2	A0A0B4J234	112 aa		5.74	□□□□□ -1.49
GARNL3-218	ENST00000487565		H3BQ15	152 aa		5.74	□□□□□ -1.49
GARNL3-218	ENST00000487565	SLC17A3	O00476	420 aa		5.74	□□□□□ -1.49
GARNL3-218	ENST00000487565	ZNF253	O75346	499 aa		5.74	□□□□□ -1.49
GARNL3-218	ENST00000487565	NBEAP1	P0C6P0	100 aa		5.74	□□□□□ -1.49
GARNL3-218	ENST00000487565	ID1	P41134	155 aa		5.74	□□□□□ -1.49
GARNL3-218	ENST00000487565	UBE2G2	P60604	165 aa		5.74	□□□□□ -1.49
GARNL3-218	ENST00000487565	CLLU1	Q5K131	121 aa		5.74	□□□□□ -1.49
GARNL3-218	ENST00000487565	FAM90A2P	Q658T7	463 aa		5.74	□□□□□ -1.49
GARNL3-218	ENST00000487565	KRTAP5-3	Q6L8H2	238 aa		5.74	□□□□□ -1.49
GARNL3-218	ENST00000487565	GBGT1	Q8N5D6	347 aa		5.74	□□□□□ -1.49
GARNL3-218	ENST00000487565	MS4A6A	Q9H2W1	248 aa		5.74	□□□□□ -1.49
GARNL3-218	ENST00000487565	AAMDC	Q9H7C9	122 aa		5.74	□□□□□ -1.49
GARNL3-218	ENST00000487565	ZNF586	Q9NXT0	402 aa		5.74	□□□□□ -1.49
GARNL3-218	ENST00000487565	SMAD5-AS1	Q9Y6J3	95 aa		5.74	□□□□□ -1.49
GARNL3-218	ENST00000487565	ARL2-SNX15	V9GYD0	113 aa		5.74	□□□□□ -1.49
GARNL3-218	ENST00000487565	DNHD1	Q96M86	4753 aa		5.74	□□□□□ -1.49
GARNL3-218	ENST00000487565	MGAM2	Q2M2H8	2515 aa		5.73	□□□□□ -1.49
GARNL3-218	ENST00000487565	ISLR	O14498	428 aa		5.73	□□□□□ -1.49
GARNL3-218	ENST00000487565	SOCS3	O14543	225 aa		5.73	□□□□□ -1.49
GARNL3-218	ENST00000487565	BCL2	P10415	239 aa		5.73	□□□□□ -1.49
GARNL3-218	ENST00000487565	SNRPD3	P62318	126 aa	Known RBP	5.73	□□□□□ -1.49
GARNL3-218	ENST00000487565	PSG9	Q00887	426 aa		5.73	□□□□□ -1.49
GARNL3-218	ENST00000487565		Q9H3A6	140 aa		5.73	□□□□□ -1.49
GARNL3-218	ENST00000487565	ZNF331	Q9NQX6	463 aa	Predicted RBP	5.73	□□□□□ -1.49
GARNL3-218	ENST00000487565	OTOR	Q9NRC9	128 aa		5.73	□□□□□ -1.49
GARNL3-218	ENST00000487565		A0A1W2PRE2	83 aa		5.72	□□□□□ -1.49
GARNL3-218	ENST00000487565	IZUMO1R	A6ND01	250 aa		5.72	□□□□□ -1.49
GARNL3-218	ENST00000487565	FAM74A7	A6NL05	159 aa		5.72	□□□□□ -1.49
GARNL3-218	ENST00000487565	GGTLC3	B5MD39	225 aa		5.72	□□□□□ -1.49
GARNL3-218	ENST00000487565		K7EQG2	157 aa		5.72	□□□□□ -1.49
GARNL3-218	ENST00000487565	PAGE4	O60829	102 aa		5.72	□□□□□ -1.49
GARNL3-218	ENST00000487565	NDUFB4	O95168	129 aa		5.72	□□□□□ -1.49
GARNL3-218	ENST00000487565	ZNF688	P0C7X2	276 aa		5.72	□□□□□ -1.49
GARNL3-218	ENST00000487565	TAGLN2	P37802	199 aa	Known RBP	5.72	□□□□□ -1.49
GARNL3-218	ENST00000487565	RAN	P62826	216 aa	Known RBP	5.72	□□□□□ -1.49
GARNL3-218	ENST00000487565	CCL20	P78556	96 aa		5.72	□□□□□ -1.49
GARNL3-218	ENST00000487565	HAGH	Q16775	308 aa		5.72	□□□□□ -1.49
GARNL3-218	ENST00000487565	PSMG4	Q5JS54	123 aa		5.72	□□□□□ -1.49
GARNL3-218	ENST00000487565	CST9LP1	Q5W188	147 aa		5.72	□□□□□ -1.49
GARNL3-218	ENST00000487565	GTSCR1	Q86UQ5	136 aa		5.72	□□□□□ -1.49
GARNL3-218	ENST00000487565	LYPD1	Q8N2G4	141 aa		5.72	□□□□□ -1.49
GARNL3-218	ENST00000487565	RNF182	Q8N6D2	247 aa		5.72	□□□□□ -1.49
GARNL3-218	ENST00000487565	ZNF738	Q8NE65	137 aa		5.72	□□□□□ -1.49
GARNL3-218	ENST00000487565	LYPD6B	Q8NI32	183 aa		5.72	□□□□□ -1.49
GARNL3-218	ENST00000487565	CMTM2	Q8TAZ6	248 aa		5.72	□□□□□ -1.49
GARNL3-218	ENST00000487565	SUN5	Q8TC36	379 aa		5.72	□□□□□ -1.49
GARNL3-218	ENST00000487565	DCANP1	Q8TF63	244 aa		5.72	□□□□□ -1.49
GARNL3-218	ENST00000487565	MRPL53	Q96EL3	112 aa	Known RBP	5.72	□□□□□ -1.49
GARNL3-218	ENST00000487565	C17orf77	Q96MU5	243 aa		5.72	□□□□□ -1.49
GARNL3-218	ENST00000487565	LINC00052	Q96N35	136 aa		5.72	□□□□□ -1.49
GARNL3-218	ENST00000487565	CLEC5A	Q9NY25	188 aa		5.72	□□□□□ -1.49
GARNL3-218	ENST00000487565	RPH3AL	Q9UNE2	315 aa		5.72	□□□□□ -1.49
GARNL3-218	ENST00000487565	YTHDF2	Q9Y5A9	579 aa	Known RBP	5.72	□□□□□ -1.49
GARNL3-218	ENST00000487565	TRAV8-2	A0A0B4J237	113 aa		5.71	□□□□□ -1.5
GARNL3-218	ENST00000487565	LOC102723971	A0A1B0GUV8	181 aa		5.71	□□□□□ -1.5
GARNL3-218	ENST00000487565	C11orf94	C9JXX5	98 aa		5.71	□□□□□ -1.5
GARNL3-218	ENST00000487565	SLC25A5	P05141	298 aa	Known RBP	5.71	□□□□□ -1.5
GARNL3-218	ENST00000487565	CSN1S1	P47710	185 aa		5.71	□□□□□ -1.5
GARNL3-218	ENST00000487565	ATP5G3	P48201	142 aa		5.71	□□□□□ -1.5
GARNL3-218	ENST00000487565	EXOC3-AS1	Q8N2X6	119 aa		5.71	□□□□□ -1.5

Retrieved 100 of 20,778 RNA–protein pairs in 31 ms