RNA–Protein interactions for RNA: ENST00000487234.1

TMEM50A-204, Transcript of transmembrane protein 50A, humanhuman

TSL 3

Gene TMEM50A, Length 511 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM50A-204ENST00000487234 CROCCP2Q86T23 111 aa0.85□□□□□ -2.27
TMEM50A-204ENST00000487234 OR5AS1Q8N127 324 aa0.85□□□□□ -2.27
TMEM50A-204ENST00000487234 LRRC18Q8N456 261 aa0.85□□□□□ -2.27
TMEM50A-204ENST00000487234 CCL4L1Q8NHW4 92 aa0.85□□□□□ -2.27
TMEM50A-204ENST00000487234 PSMF1Q92530 271 aa0.85□□□□□ -2.27
TMEM50A-204ENST00000487234 NIT2Q9NQR4 276 aa0.85□□□□□ -2.27
TMEM50A-204ENST00000487234 NCOA6Q14686 2063 aaPredicted RBP0.85□□□□□ -2.27
TMEM50A-204ENST00000487234 FREM3P0C091 2139 aa0.85□□□□□ -2.27
TMEM50A-204ENST00000487234 KIAA1549Q9HCM3 1950 aa0.85□□□□□ -2.27
TMEM50A-204ENST00000487234 C9orf170A2RU37 121 aa0.84□□□□□ -2.27
TMEM50A-204ENST00000487234 C5orf67F2Z3F1 127 aa0.84□□□□□ -2.27
TMEM50A-204ENST00000487234 FAM107AO95990 144 aa0.84□□□□□ -2.27
TMEM50A-204ENST00000487234 MT-ND6P03923 174 aa0.84□□□□□ -2.27
TMEM50A-204ENST00000487234 S100GP29377 79 aa0.84□□□□□ -2.27
TMEM50A-204ENST00000487234 SDC2P34741 201 aa0.84□□□□□ -2.27
TMEM50A-204ENST00000487234 OR9Q1Q8NGQ5 310 aa0.84□□□□□ -2.27
TMEM50A-204ENST00000487234 BORCS5Q969J3 196 aa0.84□□□□□ -2.27
TMEM50A-204ENST00000487234 CCDC115Q96NT0 180 aa0.84□□□□□ -2.27
TMEM50A-204ENST00000487234 TCEAL2Q9H3H9 227 aaPredicted RBP0.84□□□□□ -2.27
TMEM50A-204ENST00000487234 TRAPPC2LQ9UL33 140 aa0.84□□□□□ -2.27
TMEM50A-204ENST00000487234 C22orf24Q9Y442 160 aa0.84□□□□□ -2.27
TMEM50A-204ENST00000487234 UNC13CQ8NB66 2214 aa0.84□□□□□ -2.28
TMEM50A-204ENST00000487234 PLXNA4Q9HCM2 1894 aa0.84□□□□□ -2.28
TMEM50A-204ENST00000487234 DLG5Q8TDM6 1919 aa0.83□□□□□ -2.28
TMEM50A-204ENST00000487234 MCM3APO60318 1980 aa0.83□□□□□ -2.28
TMEM50A-204ENST00000487234 TNRC6AQ8NDV7 1962 aaKnown RBP0.83□□□□□ -2.28
TMEM50A-204ENST00000487234 TRBV7-6A0A0J9YX20 115 aa0.83□□□□□ -2.28
TMEM50A-204ENST00000487234 F8W1H4 67 aa0.83□□□□□ -2.28
TMEM50A-204ENST00000487234 LYRM1O43325 122 aa0.83□□□□□ -2.28
TMEM50A-204ENST00000487234 COX7CP15954 63 aa0.83□□□□□ -2.28
TMEM50A-204ENST00000487234 MRPS36P82909 103 aaKnown RBP0.83□□□□□ -2.28
TMEM50A-204ENST00000487234 AKAP14Q86UN6 197 aa0.83□□□□□ -2.28
TMEM50A-204ENST00000487234 LINC00269Q8N2A0 174 aa0.83□□□□□ -2.28
TMEM50A-204ENST00000487234 MCEEQ96PE7 176 aa0.83□□□□□ -2.28
TMEM50A-204ENST00000487234 MRPL57Q9BQC6 102 aaKnown RBP0.83□□□□□ -2.28
TMEM50A-204ENST00000487234 CECR2Q9BXF3 1484 aa0.83□□□□□ -2.28
TMEM50A-204ENST00000487234 HEATR1Q9H583 2144 aaKnown RBP0.83□□□□□ -2.28
TMEM50A-204ENST00000487234 COL24A1Q17RW2 1714 aa0.83□□□□□ -2.28
TMEM50A-204ENST00000487234 ANKRD30AQ9BXX3 1397 aa0.83□□□□□ -2.28
TMEM50A-204ENST00000487234 KIAA1107Q9UPP5 1409 aa0.82□□□□□ -2.28
TMEM50A-204ENST00000487234 MGAMO43451 1857 aa0.82□□□□□ -2.28
TMEM50A-204ENST00000487234 PIK3C2AO00443 1686 aa0.82□□□□□ -2.28
TMEM50A-204ENST00000487234 TRBV27A0A0K0K1C4 114 aa0.82□□□□□ -2.28
TMEM50A-204ENST00000487234 TSTD3H0UI37 97 aa0.82□□□□□ -2.28
TMEM50A-204ENST00000487234 KLF7O75840 302 aaPredicted RBP0.82□□□□□ -2.28
TMEM50A-204ENST00000487234 DNAL4O96015 105 aa0.82□□□□□ -2.28
TMEM50A-204ENST00000487234 FABP4P15090 132 aa0.82□□□□□ -2.28
TMEM50A-204ENST00000487234 RPS28P62857 69 aaKnown RBP0.82□□□□□ -2.28
TMEM50A-204ENST00000487234 KRTAP5-10Q6L8G5 202 aa0.82□□□□□ -2.28
TMEM50A-204ENST00000487234 LINC00322Q6ZN03 302 aaPredicted RBP0.82□□□□□ -2.28
TMEM50A-204ENST00000487234 FOXI2Q6ZQN5 318 aa0.82□□□□□ -2.28
TMEM50A-204ENST00000487234 LINC00305Q7Z4B0 112 aa0.82□□□□□ -2.28
TMEM50A-204ENST00000487234 TEN1Q86WV5 123 aa0.82□□□□□ -2.28
TMEM50A-204ENST00000487234 OR5H6Q8NGV6 325 aa0.82□□□□□ -2.28
TMEM50A-204ENST00000487234 OR10AG1Q8NH19 301 aa0.82□□□□□ -2.28
TMEM50A-204ENST00000487234 GINS2Q9Y248 185 aa0.82□□□□□ -2.28
TMEM50A-204ENST00000487234 TRAV13-1A0A0B4J241 112 aa0.81□□□□□ -2.28
TMEM50A-204ENST00000487234 LOC107984640A0A0U1RRK4 108 aa0.81□□□□□ -2.28
TMEM50A-204ENST00000487234 H3BMG7 143 aa0.81□□□□□ -2.28
TMEM50A-204ENST00000487234 FOXA3P55318 350 aaPredicted RBP0.81□□□□□ -2.28
TMEM50A-204ENST00000487234 NDUFA6P56556 154 aa0.81□□□□□ -2.28
TMEM50A-204ENST00000487234 PSG9Q00887 426 aa0.81□□□□□ -2.28
TMEM50A-204ENST00000487234 MIR22HGQ0VDD5 57 aa0.81□□□□□ -2.28
TMEM50A-204ENST00000487234 GKN2Q86XP6 184 aa0.81□□□□□ -2.28
TMEM50A-204ENST00000487234 TEX29Q8N6K0 151 aa0.81□□□□□ -2.28
TMEM50A-204ENST00000487234 TMEM35BQ8NCS4 154 aa0.81□□□□□ -2.28
TMEM50A-204ENST00000487234 ZNF431Q8TF32 576 aaPredicted RBP0.81□□□□□ -2.28
TMEM50A-204ENST00000487234 SKA2Q8WVK7 121 aaPredicted RBP0.81□□□□□ -2.28
TMEM50A-204ENST00000487234 PRELID3AQ96N28 172 aa0.81□□□□□ -2.28
TMEM50A-204ENST00000487234 OR4C12Q96R67 309 aa0.81□□□□□ -2.28
TMEM50A-204ENST00000487234 LXNQ9BS40 222 aa0.81□□□□□ -2.28
TMEM50A-204ENST00000487234 CBLN4Q9NTU7 201 aa0.81□□□□□ -2.28
TMEM50A-204ENST00000487234 TPRKBQ9Y3C4 175 aa0.81□□□□□ -2.28
TMEM50A-204ENST00000487234 HSPB11Q9Y547 144 aa0.81□□□□□ -2.28
TMEM50A-204ENST00000487234 ROS1P08922 2347 aa0.81□□□□□ -2.28
TMEM50A-204ENST00000487234 AHNAK2Q8IVF2 5795 aa0.81□□□□□ -2.28
TMEM50A-204ENST00000487234 MUC16Q8WXI7 14507 aa0.8□□□□□ -2.28
TMEM50A-204ENST00000487234 TCOF1Q13428 1488 aaKnown RBP0.8□□□□□ -2.28
TMEM50A-204ENST00000487234 ARAP1Q96P48 1450 aa0.8□□□□□ -2.28
TMEM50A-204ENST00000487234 CIRBPQ14011 172 aaKnown RBP0.8□□□□□ -2.28
TMEM50A-204ENST00000487234 DIAPH2-AS1Q14236 149 aa0.8□□□□□ -2.28
TMEM50A-204ENST00000487234 VMA21Q3ZAQ7 101 aa0.8□□□□□ -2.28
TMEM50A-204ENST00000487234 ZCCHC23Q6ZST2 131 aa0.8□□□□□ -2.28
TMEM50A-204ENST00000487234 TMEM229BQ8NBD8 167 aa0.8□□□□□ -2.28
TMEM50A-204ENST00000487234 MORN4Q8NDC4 146 aa0.8□□□□□ -2.28
TMEM50A-204ENST00000487234 OR4B1Q8NGF8 309 aa0.8□□□□□ -2.28
TMEM50A-204ENST00000487234 CST11Q9H112 138 aa0.8□□□□□ -2.28
TMEM50A-204ENST00000487234 TMEM14CQ9P0S9 112 aa0.8□□□□□ -2.28
TMEM50A-204ENST00000487234 FAM135BQ49AJ0 1406 aa0.8□□□□□ -2.28
TMEM50A-204ENST00000487234 NUP210Q8TEM1 1887 aaPredicted RBP0.8□□□□□ -2.28
TMEM50A-204ENST00000487234 COL1A1P02452 1464 aaPredicted RBP0.8□□□□□ -2.28
TMEM50A-204ENST00000487234 UNC13AQ9UPW8 1703 aa0.79□□□□□ -2.28
TMEM50A-204ENST00000487234 H3BRM9 83 aa0.79□□□□□ -2.28
TMEM50A-204ENST00000487234 IGHV3-33P01772 117 aa0.79□□□□□ -2.28
TMEM50A-204ENST00000487234 MAXP61244 160 aa0.79□□□□□ -2.28
TMEM50A-204ENST00000487234 Q5XG85 94 aa0.79□□□□□ -2.28
TMEM50A-204ENST00000487234 HAGHLQ6PII5 290 aaPredicted RBP0.79□□□□□ -2.28
TMEM50A-204ENST00000487234 NAT14Q8WUY8 206 aa0.79□□□□□ -2.28
TMEM50A-204ENST00000487234 CLEC2BQ92478 149 aa0.79□□□□□ -2.28
TMEM50A-204ENST00000487234 NABP2Q9BQ15 211 aa0.79□□□□□ -2.28
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms