RNA–Protein interactions for RNA: ENST00000487010.1

COL3A1-206, Transcript of collagen type III alpha 1 chain, humanhuman

TSL 2

Gene COL3A1, Length 2,054 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL3A1-206ENST00000487010 ADAMTSL5Q6ZMM2 481 aa9.55□□□□□ -0.88
COL3A1-206ENST00000487010 OR4X2Q8NGF9 303 aa9.55□□□□□ -0.88
COL3A1-206ENST00000487010 PRR25Q96S07 402 aa9.55□□□□□ -0.88
COL3A1-206ENST00000487010 B9A039 149 aa9.54□□□□□ -0.88
COL3A1-206ENST00000487010 H3BUT2 72 aa9.54□□□□□ -0.88
COL3A1-206ENST00000487010 MFAP4P55083 255 aa9.54□□□□□ -0.88
COL3A1-206ENST00000487010 TCTAP57738 103 aa9.54□□□□□ -0.88
COL3A1-206ENST00000487010 KIR3DS1Q14943 382 aa9.54□□□□□ -0.88
COL3A1-206ENST00000487010 TWIST1Q15672 202 aa9.54□□□□□ -0.88
COL3A1-206ENST00000487010 FER1L6-AS1Q8NA97 138 aa9.54□□□□□ -0.88
COL3A1-206ENST00000487010 ZNF48Q96MX3 618 aaPredicted RBP9.54□□□□□ -0.88
COL3A1-206ENST00000487010 COL25A1Q9BXS0 654 aaPredicted RBP9.54□□□□□ -0.88
COL3A1-206ENST00000487010 NPFFR1Q9GZQ6 430 aa9.54□□□□□ -0.88
COL3A1-206ENST00000487010 PKDREJQ9NTG1 2253 aa9.54□□□□□ -0.88
COL3A1-206ENST00000487010 NPBQ8NG41 125 aa9.54□□□□□ -0.88
COL3A1-206ENST00000487010 FANCD2OSQ96PS1 177 aa9.54□□□□□ -0.88
COL3A1-206ENST00000487010 HILPDAQ9Y5L2 63 aa9.54□□□□□ -0.88
COL3A1-206ENST00000487010 IGLV11-55A0A075B6I3 123 aa9.53□□□□□ -0.88
COL3A1-206ENST00000487010 A0A0G2JLM5 398 aa9.53□□□□□ -0.88
COL3A1-206ENST00000487010 A0A1W2PRD5 423 aa9.53□□□□□ -0.88
COL3A1-206ENST00000487010 A0A1W2PRF3 423 aa9.53□□□□□ -0.88
COL3A1-206ENST00000487010 A0A1W2PRM7 423 aa9.53□□□□□ -0.88
COL3A1-206ENST00000487010 FBLL1A6NHQ2 334 aaKnown RBP9.53□□□□□ -0.88
COL3A1-206ENST00000487010 F8W735 103 aaPredicted RBP9.53□□□□□ -0.88
COL3A1-206ENST00000487010 K7EP34 96 aa9.53□□□□□ -0.88
COL3A1-206ENST00000487010 NDUFA3O95167 84 aa9.53□□□□□ -0.88
COL3A1-206ENST00000487010 IGLC6P0CF74 106 aa9.53□□□□□ -0.88
COL3A1-206ENST00000487010 PCP2Q8IVA1 136 aa9.53□□□□□ -0.88
COL3A1-206ENST00000487010 CFHR4Q92496 578 aa9.53□□□□□ -0.88
COL3A1-206ENST00000487010 CSTL1Q9H114 145 aa9.53□□□□□ -0.88
COL3A1-206ENST00000487010 MEGF9Q9H1U4 602 aa9.53□□□□□ -0.88
COL3A1-206ENST00000487010 ONECUT1Q9UBC0 465 aa9.53□□□□□ -0.88
COL3A1-206ENST00000487010 SAP30O75446 220 aa9.52□□□□□ -0.88
COL3A1-206ENST00000487010 RPL7P18124 248 aaKnown RBP9.52□□□□□ -0.88
COL3A1-206ENST00000487010 BMI1P35226 326 aa9.52□□□□□ -0.88
COL3A1-206ENST00000487010 NMUP48645 174 aa9.52□□□□□ -0.88
COL3A1-206ENST00000487010 ZNF80P51504 273 aaPredicted RBP9.52□□□□□ -0.88
COL3A1-206ENST00000487010 ZNF575Q86XF7 245 aa9.52□□□□□ -0.88
COL3A1-206ENST00000487010 ABHD17AQ96GS6 310 aa9.52□□□□□ -0.88
COL3A1-206ENST00000487010 DPM3Q9P2X0 92 aa9.52□□□□□ -0.88
COL3A1-206ENST00000487010 DKK2Q9UBU2 259 aa9.52□□□□□ -0.88
COL3A1-206ENST00000487010 LINC01546A6NGU7 62 aa9.52□□□□□ -0.89
COL3A1-206ENST00000487010 NPIPB5A8MRT5 1133 aa9.52□□□□□ -0.89
COL3A1-206ENST00000487010 LY6G5BQ8NDX9 201 aa9.52□□□□□ -0.89
COL3A1-206ENST00000487010 OR2K2Q8NGT1 345 aa9.52□□□□□ -0.89
COL3A1-206ENST00000487010 RNF185Q96GF1 192 aa9.52□□□□□ -0.89
COL3A1-206ENST00000487010 VGLL1Q99990 258 aa9.52□□□□□ -0.89
COL3A1-206ENST00000487010 NAA38Q9BRA0 125 aaKnown RBP9.52□□□□□ -0.89
COL3A1-206ENST00000487010 RP1L1Q8IWN7 2480 aaPredicted RBP9.52□□□□□ -0.89
COL3A1-206ENST00000487010 SRSF2Q01130 221 aaKnown RBP9.51□□□□□ -0.89
COL3A1-206ENST00000487010 PRSS57Q6UWY2 283 aa9.51□□□□□ -0.89
COL3A1-206ENST00000487010 WFDC3Q8IUB2 231 aa9.51□□□□□ -0.89
COL3A1-206ENST00000487010 Q8TAT8 98 aa9.51□□□□□ -0.89
COL3A1-206ENST00000487010 PIFOQ8TCI5 191 aa9.51□□□□□ -0.89
COL3A1-206ENST00000487010 IGFBPL1Q8WX77 278 aa9.51□□□□□ -0.89
COL3A1-206ENST00000487010 OTOGLQ3ZCN5 2332 aa9.51□□□□□ -0.89
COL3A1-206ENST00000487010 CD3EP07766 207 aa9.51□□□□□ -0.89
COL3A1-206ENST00000487010 C5orf64Q2M2E5 130 aa9.51□□□□□ -0.89
COL3A1-206ENST00000487010 OR11H6Q8NGC7 330 aa9.51□□□□□ -0.89
COL3A1-206ENST00000487010 RAB37Q96AX2 223 aa9.51□□□□□ -0.89
COL3A1-206ENST00000487010 PSMG3-AS1Q96PY0 264 aa9.51□□□□□ -0.89
COL3A1-206ENST00000487010 MAP1LC3AQ9H492 121 aa9.51□□□□□ -0.89
COL3A1-206ENST00000487010 C21orf62Q9NYP8 219 aa9.51□□□□□ -0.89
COL3A1-206ENST00000487010 SMAD5-AS1Q9Y6J3 95 aa9.51□□□□□ -0.89
COL3A1-206ENST00000487010 ZZEF1O43149 2961 aa9.5□□□□□ -0.89
COL3A1-206ENST00000487010 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP9.5□□□□□ -0.89
COL3A1-206ENST00000487010 IGHG4P01861 327 aa9.5□□□□□ -0.89
COL3A1-206ENST00000487010 TTC9CQ8N5M4 171 aa9.5□□□□□ -0.89
COL3A1-206ENST00000487010 C18orf15Q96N68 181 aa9.5□□□□□ -0.89
COL3A1-206ENST00000487010 MSRB1Q9NZV6 116 aa9.5□□□□□ -0.89
COL3A1-206ENST00000487010 A0A1W2PPM0 123 aa9.49□□□□□ -0.89
COL3A1-206ENST00000487010 G3V4G9 280 aa9.49□□□□□ -0.89
COL3A1-206ENST00000487010 CEACAM3P40198 252 aa9.49□□□□□ -0.89
COL3A1-206ENST00000487010 PSMG4Q5JS54 123 aa9.49□□□□□ -0.89
COL3A1-206ENST00000487010 IGFL4Q6B9Z1 124 aa9.49□□□□□ -0.89
COL3A1-206ENST00000487010 ZNF562Q6V9R5 426 aa9.49□□□□□ -0.89
COL3A1-206ENST00000487010 Q8NA96 180 aa9.49□□□□□ -0.89
COL3A1-206ENST00000487010 ARPC1AQ92747 370 aa9.49□□□□□ -0.89
COL3A1-206ENST00000487010 CNFNQ9BYD5 112 aa9.49□□□□□ -0.89
COL3A1-206ENST00000487010 ZMAT4Q9H898 229 aa9.49□□□□□ -0.89
COL3A1-206ENST00000487010 IGHV3-23P01764 117 aa9.49□□□□□ -0.89
COL3A1-206ENST00000487010 ORM1P02763 201 aa9.49□□□□□ -0.89
COL3A1-206ENST00000487010 HLA-DMBP28068 263 aa9.49□□□□□ -0.89
COL3A1-206ENST00000487010 FCER1GP30273 86 aa9.49□□□□□ -0.89
COL3A1-206ENST00000487010 LEPP41159 167 aa9.49□□□□□ -0.89
COL3A1-206ENST00000487010 HES1Q14469 280 aa9.49□□□□□ -0.89
COL3A1-206ENST00000487010 NEGR1Q7Z3B1 354 aa9.49□□□□□ -0.89
COL3A1-206ENST00000487010 OR5A1Q8NGJ0 315 aa9.49□□□□□ -0.89
COL3A1-206ENST00000487010 SELENOKQ9Y6D0 94 aa9.49□□□□□ -0.89
COL3A1-206ENST00000487010 PCNX1Q96RV3 2341 aa9.48□□□□□ -0.89
COL3A1-206ENST00000487010 FABP5P3A8MUU1 101 aa9.48□□□□□ -0.89
COL3A1-206ENST00000487010 GAS8-AS1O95177 125 aa9.48□□□□□ -0.89
COL3A1-206ENST00000487010 NDPQ00604 133 aa9.48□□□□□ -0.89
COL3A1-206ENST00000487010 ODF1Q14990 250 aa9.48□□□□□ -0.89
COL3A1-206ENST00000487010 ZNF672Q499Z4 452 aaPredicted RBP9.48□□□□□ -0.89
COL3A1-206ENST00000487010 NXT2Q9NPJ8 142 aaKnown RBP9.48□□□□□ -0.89
COL3A1-206ENST00000487010 HHLA3Q9XRX5 114 aa9.48□□□□□ -0.89
COL3A1-206ENST00000487010 SPCS1Q9Y6A9 102 aa9.48□□□□□ -0.89
COL3A1-206ENST00000487010 LAMA5O15230 3695 aa9.48□□□□□ -0.89
COL3A1-206ENST00000487010 DMXL2Q8TDJ6 3036 aa9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms