RNA–Protein interactions for RNA: ENST00000486711.1

SMC4-218, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 621 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-218ENST00000486711 ZC2HC1AQ96GY0 325 aa1.12□□□□□ -2.23
SMC4-218ENST00000486711 CARD19Q96LW7 228 aa1.12□□□□□ -2.23
SMC4-218ENST00000486711 WFDC10AQ9H1F0 79 aa1.12□□□□□ -2.23
SMC4-218ENST00000486711 KIAA1549Q9HCM3 1950 aa1.12□□□□□ -2.23
SMC4-218ENST00000486711 TRPM1Q7Z4N2 1603 aa1.11□□□□□ -2.23
SMC4-218ENST00000486711 DCAF1Q9Y4B6 1507 aa1.11□□□□□ -2.23
SMC4-218ENST00000486711 C5orf58C9J3I9 102 aa1.11□□□□□ -2.23
SMC4-218ENST00000486711 EFNA4P52798 201 aa1.11□□□□□ -2.23
SMC4-218ENST00000486711 SELENOSQ9BQE4 189 aa1.11□□□□□ -2.23
SMC4-218ENST00000486711 CST11Q9H112 138 aa1.11□□□□□ -2.23
SMC4-218ENST00000486711 MYO5AQ9Y4I1 1855 aaKnown RBP1.11□□□□□ -2.23
SMC4-218ENST00000486711 MCM3APO60318 1980 aa1.1□□□□□ -2.23
SMC4-218ENST00000486711 MUC16Q8WXI7 14507 aa1.1□□□□□ -2.23
SMC4-218ENST00000486711 PEAK1Q9H792 1746 aa1.1□□□□□ -2.23
SMC4-218ENST00000486711 TECPR2O15040 1411 aa1.1□□□□□ -2.23
SMC4-218ENST00000486711 SDC2P34741 201 aa1.1□□□□□ -2.23
SMC4-218ENST00000486711 PRB3Q04118 309 aaPredicted RBP1.1□□□□□ -2.23
SMC4-218ENST00000486711 SPATA45Q537H7 98 aa1.1□□□□□ -2.23
SMC4-218ENST00000486711 KRTAP5-10Q6L8G5 202 aa1.1□□□□□ -2.23
SMC4-218ENST00000486711 ANGPTL5Q86XS5 388 aa1.1□□□□□ -2.23
SMC4-218ENST00000486711 OR4C12Q96R67 309 aa1.1□□□□□ -2.23
SMC4-218ENST00000486711 EFCAB11Q9BUY7 163 aa1.1□□□□□ -2.23
SMC4-218ENST00000486711 LRTM1Q9HBL6 345 aa1.1□□□□□ -2.23
SMC4-218ENST00000486711 EEA1Q15075 1411 aa1.09□□□□□ -2.23
SMC4-218ENST00000486711 TRAPPC8Q9Y2L5 1435 aa1.09□□□□□ -2.23
SMC4-218ENST00000486711 TRAV23DV6A0A075B6W5 121 aa1.09□□□□□ -2.23
SMC4-218ENST00000486711 A0A1W2PPM0 123 aa1.09□□□□□ -2.23
SMC4-218ENST00000486711 A0A1W2PRE2 83 aa1.09□□□□□ -2.23
SMC4-218ENST00000486711 GABARAPH6UMI1 98 aa1.09□□□□□ -2.23
SMC4-218ENST00000486711 FAM107AO95990 144 aa1.09□□□□□ -2.23
SMC4-218ENST00000486711 IGLV3-1P01715 115 aa1.09□□□□□ -2.23
SMC4-218ENST00000486711 FABP4P15090 132 aa1.09□□□□□ -2.23
SMC4-218ENST00000486711 S100A11P31949 105 aa1.09□□□□□ -2.23
SMC4-218ENST00000486711 DIAPH2-AS1Q14236 149 aa1.09□□□□□ -2.23
SMC4-218ENST00000486711 Q8N6K4 173 aa1.09□□□□□ -2.23
SMC4-218ENST00000486711 OR5H6Q8NGV6 325 aa1.09□□□□□ -2.23
SMC4-218ENST00000486711 E9PCH4 1651 aa1.09□□□□□ -2.24
SMC4-218ENST00000486711 MGAMO43451 1857 aa1.09□□□□□ -2.24
SMC4-218ENST00000486711 NUP210LQ5VU65 1888 aa1.08□□□□□ -2.24
SMC4-218ENST00000486711 PIK3C2AO00443 1686 aa1.08□□□□□ -2.24
SMC4-218ENST00000486711 COL1A1P02452 1464 aaPredicted RBP1.08□□□□□ -2.24
SMC4-218ENST00000486711 IFNA21P01568 189 aa1.08□□□□□ -2.24
SMC4-218ENST00000486711 MIR22HGQ0VDD5 57 aa1.08□□□□□ -2.24
SMC4-218ENST00000486711 LINC00575Q6W349 94 aa1.08□□□□□ -2.24
SMC4-218ENST00000486711 FOXI2Q6ZQN5 318 aa1.08□□□□□ -2.24
SMC4-218ENST00000486711 KIAA1107Q9UPP5 1409 aa1.07□□□□□ -2.24
SMC4-218ENST00000486711 H7BYZ3 331 aa1.07□□□□□ -2.24
SMC4-218ENST00000486711 PGRMC1O00264 195 aaKnown RBP1.07□□□□□ -2.24
SMC4-218ENST00000486711 TFAMQ00059 246 aaKnown RBP1.07□□□□□ -2.24
SMC4-218ENST00000486711 OR10AC1Q8NH08 325 aa1.07□□□□□ -2.24
SMC4-218ENST00000486711 DIRC1Q969H9 104 aa1.07□□□□□ -2.24
SMC4-218ENST00000486711 SMPXQ9UHP9 88 aa1.07□□□□□ -2.24
SMC4-218ENST00000486711 FRMPD1Q5SYB0 1578 aa1.07□□□□□ -2.24
SMC4-218ENST00000486711 HEATR1Q9H583 2144 aaKnown RBP1.06□□□□□ -2.24
SMC4-218ENST00000486711 IGHV3-33P01772 117 aa1.06□□□□□ -2.24
SMC4-218ENST00000486711 TPT1P13693 172 aaKnown RBP1.06□□□□□ -2.24
SMC4-218ENST00000486711 LINC00299Q6ZSB3 139 aa1.06□□□□□ -2.24
SMC4-218ENST00000486711 SMIM15Q7Z3B0 74 aa1.06□□□□□ -2.24
SMC4-218ENST00000486711 LINC00305Q7Z4B0 112 aa1.06□□□□□ -2.24
SMC4-218ENST00000486711 OR5AK2Q8NH90 309 aa1.06□□□□□ -2.24
SMC4-218ENST00000486711 ANP32BQ92688 251 aaKnown RBP1.06□□□□□ -2.24
SMC4-218ENST00000486711 PRELID3AQ96N28 172 aa1.06□□□□□ -2.24
SMC4-218ENST00000486711 LXNQ9BS40 222 aa1.06□□□□□ -2.24
SMC4-218ENST00000486711 MYLKQ15746 1914 aa1.05□□□□□ -2.24
SMC4-218ENST00000486711 MYH2Q9UKX2 1941 aa1.05□□□□□ -2.24
SMC4-218ENST00000486711 ADGBQ8N7X0 1667 aa1.05□□□□□ -2.24
SMC4-218ENST00000486711 TRACP01848 142 aa1.05□□□□□ -2.24
SMC4-218ENST00000486711 CASC2Q6XLA1 102 aa1.05□□□□□ -2.24
SMC4-218ENST00000486711 CCL4L1Q8NHW4 92 aa1.05□□□□□ -2.24
SMC4-218ENST00000486711 GRPEL2Q8TAA5 225 aa1.05□□□□□ -2.24
SMC4-218ENST00000486711 THEM6Q8WUY1 208 aa1.05□□□□□ -2.24
SMC4-218ENST00000486711 RMND5BQ96G75 393 aaPredicted RBP1.05□□□□□ -2.24
SMC4-218ENST00000486711 BOKQ9UMX3 212 aaPredicted RBP1.05□□□□□ -2.24
SMC4-218ENST00000486711 N4BP2Q86UW6 1770 aaPredicted RBP1.05□□□□□ -2.24
SMC4-218ENST00000486711 CEP162Q5TB80 1403 aa1.05□□□□□ -2.24
SMC4-218ENST00000486711 ALPK3Q96L96 1907 aa1.05□□□□□ -2.24
SMC4-218ENST00000486711 SAMD13Q5VXD3 122 aa1.04□□□□□ -2.24
SMC4-218ENST00000486711 LINC00269Q8N2A0 174 aa1.04□□□□□ -2.24
SMC4-218ENST00000486711 TAF9BQ9HBM6 251 aa1.04□□□□□ -2.24
SMC4-218ENST00000486711 MED31Q9Y3C7 131 aa1.04□□□□□ -2.24
SMC4-218ENST00000486711 KTN1Q86UP2 1357 aaKnown RBP1.04□□□□□ -2.24
SMC4-218ENST00000486711 FREM3P0C091 2139 aa1.04□□□□□ -2.24
SMC4-218ENST00000486711 ZCCHC6Q5VYS8 1495 aaKnown RBP1.04□□□□□ -2.24
SMC4-218ENST00000486711 COL24A1Q17RW2 1714 aa1.03□□□□□ -2.24
SMC4-218ENST00000486711 PLXNA4Q9HCM2 1894 aa1.03□□□□□ -2.24
SMC4-218ENST00000486711 TRAV13-1A0A0B4J241 112 aa1.03□□□□□ -2.24
SMC4-218ENST00000486711 C3orf85A0A1B0GTC6 90 aa1.03□□□□□ -2.24
SMC4-218ENST00000486711 S100GP29377 79 aa1.03□□□□□ -2.24
SMC4-218ENST00000486711 SRP9P49458 86 aaKnown RBP1.03□□□□□ -2.24
SMC4-218ENST00000486711 MAXP61244 160 aa1.03□□□□□ -2.24
SMC4-218ENST00000486711 HRCT1Q6UXD1 115 aa1.03□□□□□ -2.24
SMC4-218ENST00000486711 TOMM20LQ6UXN7 152 aa1.03□□□□□ -2.24
SMC4-218ENST00000486711 SBSPONQ8IVN8 264 aa1.03□□□□□ -2.24
SMC4-218ENST00000486711 OR9Q1Q8NGQ5 310 aa1.03□□□□□ -2.24
SMC4-218ENST00000486711 ERBINQ96RT1 1412 aa1.03□□□□□ -2.24
SMC4-218ENST00000486711 GOLGA3Q08378 1498 aa1.03□□□□□ -2.24
SMC4-218ENST00000486711 BAZ1AQ9NRL2 1556 aaPredicted RBP1.03□□□□□ -2.24
SMC4-218ENST00000486711 ZCCHC11Q5TAX3 1644 aaKnown RBP1.03□□□□□ -2.24
SMC4-218ENST00000486711 SNRNP200O75643 2136 aaKnown RBP1.03□□□□□ -2.25
SMC4-218ENST00000486711 TRBV27A0A0K0K1C4 114 aa1.02□□□□□ -2.25
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms