RNA–Protein interactions for RNA: ENST00000485901.1

HLA-DOA-204, Transcript of major histocompatibility complex, class II, DO alpha, humanhuman

Gene HLA-DOA, Length 596 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOA-204ENST00000485901 HIST1H1AQ02539 215 aaPredicted RBP8.68□□□□□ -1.02
HLA-DOA-204ENST00000485901 AMTNQ6UX39 209 aa8.68□□□□□ -1.02
HLA-DOA-204ENST00000485901 HSD17B11Q8NBQ5 300 aa8.68□□□□□ -1.02
HLA-DOA-204ENST00000485901 OR10J6PQ8NGY7 276 aa8.68□□□□□ -1.02
HLA-DOA-204ENST00000485901 BLNKQ8WV28 456 aa8.68□□□□□ -1.02
HLA-DOA-204ENST00000485901 RNF141Q8WVD5 230 aa8.68□□□□□ -1.02
HLA-DOA-204ENST00000485901 PRELID1Q9Y255 219 aa8.68□□□□□ -1.02
HLA-DOA-204ENST00000485901 SMIM9A6NGZ8 99 aa8.67□□□□□ -1.02
HLA-DOA-204ENST00000485901 G3V3Q6 166 aa8.67□□□□□ -1.02
HLA-DOA-204ENST00000485901 TAAR5O14804 337 aa8.67□□□□□ -1.02
HLA-DOA-204ENST00000485901 NDUFB4O95168 129 aa8.67□□□□□ -1.02
HLA-DOA-204ENST00000485901 MBP02144 154 aa8.67□□□□□ -1.02
HLA-DOA-204ENST00000485901 SERF2P84101 59 aa8.67□□□□□ -1.02
HLA-DOA-204ENST00000485901 PMS2P11Q13670 270 aa8.67□□□□□ -1.02
HLA-DOA-204ENST00000485901 ZNF705AQ6ZN79 300 aaPredicted RBP8.67□□□□□ -1.02
HLA-DOA-204ENST00000485901 OR10G4Q8NGN3 311 aa8.67□□□□□ -1.02
HLA-DOA-204ENST00000485901 OR10G9Q8NGN4 311 aa8.67□□□□□ -1.02
HLA-DOA-204ENST00000485901 OR10G7Q8NGN6 311 aa8.67□□□□□ -1.02
HLA-DOA-204ENST00000485901 GNPNAT1Q96EK6 184 aaPredicted RBP8.67□□□□□ -1.02
HLA-DOA-204ENST00000485901 MRPL53Q96EL3 112 aaKnown RBP8.67□□□□□ -1.02
HLA-DOA-204ENST00000485901 PSMG3Q9BT73 122 aaPredicted RBP8.67□□□□□ -1.02
HLA-DOA-204ENST00000485901 C11orf68Q9H3H3 251 aaKnown RBP8.67□□□□□ -1.02
HLA-DOA-204ENST00000485901 AAMDCQ9H7C9 122 aa8.67□□□□□ -1.02
HLA-DOA-204ENST00000485901 GOLT1BQ9Y3E0 138 aa8.67□□□□□ -1.02
HLA-DOA-204ENST00000485901 RFNGQ9Y644 331 aa8.67□□□□□ -1.02
HLA-DOA-204ENST00000485901 X6R8D5 127 aa8.67□□□□□ -1.02
HLA-DOA-204ENST00000485901 HECTD4Q9Y4D8 3996 aa8.66□□□□□ -1.02
HLA-DOA-204ENST00000485901 DEFB4AO15263 64 aa8.66□□□□□ -1.02
HLA-DOA-204ENST00000485901 ARPC5O15511 151 aa8.66□□□□□ -1.02
HLA-DOA-204ENST00000485901 OR7C2O60412 319 aa8.66□□□□□ -1.02
HLA-DOA-204ENST00000485901 OR10J4P0C629 311 aa8.66□□□□□ -1.02
HLA-DOA-204ENST00000485901 ATP6V0CP27449 155 aa8.66□□□□□ -1.02
HLA-DOA-204ENST00000485901 KHDC3LQ587J8 217 aa8.66□□□□□ -1.02
HLA-DOA-204ENST00000485901 Q8NAQ8 132 aa8.66□□□□□ -1.02
HLA-DOA-204ENST00000485901 OR2G3Q8NGZ4 309 aa8.66□□□□□ -1.02
HLA-DOA-204ENST00000485901 PHLDA1Q8WV24 401 aaPredicted RBP8.66□□□□□ -1.02
HLA-DOA-204ENST00000485901 FXYD5Q96DB9 178 aa8.66□□□□□ -1.02
HLA-DOA-204ENST00000485901 IGF2BP2-AS1Q96M15 143 aa8.66□□□□□ -1.02
HLA-DOA-204ENST00000485901 NEU1Q99519 415 aa8.66□□□□□ -1.02
HLA-DOA-204ENST00000485901 IGHV3OR16-12A0A075B7B8 117 aa8.65□□□□□ -1.02
HLA-DOA-204ENST00000485901 IGHV4-28A0A0C4DH34 117 aa8.65□□□□□ -1.02
HLA-DOA-204ENST00000485901 PRAC2D3DTV9 90 aa8.65□□□□□ -1.02
HLA-DOA-204ENST00000485901 SMLR1H3BR10 107 aa8.65□□□□□ -1.02
HLA-DOA-204ENST00000485901 BOLA2-SMG1P6H3BVE0 249 aa8.65□□□□□ -1.02
HLA-DOA-204ENST00000485901 RBMY1A1P0DJD3 496 aaKnown RBP8.65□□□□□ -1.02
HLA-DOA-204ENST00000485901 RBMY1CP0DJD4 496 aa8.65□□□□□ -1.02
HLA-DOA-204ENST00000485901 RBMY1FQ15415 496 aaKnown RBP8.65□□□□□ -1.02
HLA-DOA-204ENST00000485901 SPINK13Q1W4C9 94 aa8.65□□□□□ -1.02
HLA-DOA-204ENST00000485901 RPL7L1Q6DKI1 246 aaKnown RBP8.65□□□□□ -1.02
HLA-DOA-204ENST00000485901 PQLC2Q6ZP29 291 aa8.65□□□□□ -1.02
HLA-DOA-204ENST00000485901 LYPD1Q8N2G4 141 aa8.65□□□□□ -1.02
HLA-DOA-204ENST00000485901 C11orf45Q8TAV5 145 aa8.65□□□□□ -1.02
HLA-DOA-204ENST00000485901 DNAH6Q9C0G6 4158 aa8.65□□□□□ -1.03
HLA-DOA-204ENST00000485901 HMSDA8MTL9 139 aa8.64□□□□□ -1.03
HLA-DOA-204ENST00000485901 M0R2Z0 102 aa8.64□□□□□ -1.03
HLA-DOA-204ENST00000485901 INSP01308 110 aa8.64□□□□□ -1.03
HLA-DOA-204ENST00000485901 TSPOP30536 169 aa8.64□□□□□ -1.03
HLA-DOA-204ENST00000485901 CDKN1BP46527 198 aa8.64□□□□□ -1.03
HLA-DOA-204ENST00000485901 RAB2AP61019 212 aa8.64□□□□□ -1.03
HLA-DOA-204ENST00000485901 UBE2L3P68036 154 aaKnown RBP8.64□□□□□ -1.03
HLA-DOA-204ENST00000485901 ICAM4Q14773 271 aa8.64□□□□□ -1.03
HLA-DOA-204ENST00000485901 FAM122CQ6P4D5 195 aa8.64□□□□□ -1.03
HLA-DOA-204ENST00000485901 C1orf158Q8N1D5 194 aa8.64□□□□□ -1.03
HLA-DOA-204ENST00000485901 EXOC3-AS1Q8N2X6 119 aa8.64□□□□□ -1.03
HLA-DOA-204ENST00000485901 RPP25LQ8N5L8 163 aaKnown RBP8.64□□□□□ -1.03
HLA-DOA-204ENST00000485901 ZNF503Q96F45 646 aa8.64□□□□□ -1.03
HLA-DOA-204ENST00000485901 TMEM208Q9BTX3 173 aa8.64□□□□□ -1.03
HLA-DOA-204ENST00000485901 VPS13DQ5THJ4 4388 aa8.64□□□□□ -1.03
HLA-DOA-204ENST00000485901 TMEM189A5PLL7 270 aa8.63□□□□□ -1.03
HLA-DOA-204ENST00000485901 M0R3E3 92 aa8.63□□□□□ -1.03
HLA-DOA-204ENST00000485901 CRXO43186 299 aaPredicted RBP8.63□□□□□ -1.03
HLA-DOA-204ENST00000485901 HBE1P02100 147 aa8.63□□□□□ -1.03
HLA-DOA-204ENST00000485901 PRB4P10163 310 aaPredicted RBP8.63□□□□□ -1.03
HLA-DOA-204ENST00000485901 CSN1S1P47710 185 aa8.63□□□□□ -1.03
HLA-DOA-204ENST00000485901 CDC34P49427 236 aaPredicted RBP8.63□□□□□ -1.03
HLA-DOA-204ENST00000485901 RANP62826 216 aaKnown RBP8.63□□□□□ -1.03
HLA-DOA-204ENST00000485901 Q6ZNX1 250 aa8.63□□□□□ -1.03
HLA-DOA-204ENST00000485901 LINC00477Q96M19 166 aa8.63□□□□□ -1.03
HLA-DOA-204ENST00000485901 SH3BGRL3Q9H299 93 aa8.63□□□□□ -1.03
HLA-DOA-204ENST00000485901 MUC4Q99102 2169 aa8.62□□□□□ -1.03
HLA-DOA-204ENST00000485901 TRAV12-2A0A075B6T6 113 aa8.62□□□□□ -1.03
HLA-DOA-204ENST00000485901 A0A0D9SG52 128 aa8.62□□□□□ -1.03
HLA-DOA-204ENST00000485901 C11orf94C9JXX5 98 aa8.62□□□□□ -1.03
HLA-DOA-204ENST00000485901 NPIPB6E9PJ23 425 aa8.62□□□□□ -1.03
HLA-DOA-204ENST00000485901 ZNF345Q14585 488 aa8.62□□□□□ -1.03
HLA-DOA-204ENST00000485901 RRN3P1Q2M238 152 aa8.62□□□□□ -1.03
HLA-DOA-204ENST00000485901 LINC00336Q6ZUF6 198 aa8.62□□□□□ -1.03
HLA-DOA-204ENST00000485901 TMEM256Q8N2U0 113 aa8.62□□□□□ -1.03
HLA-DOA-204ENST00000485901 KCNRGQ8N5I3 272 aa8.62□□□□□ -1.03
HLA-DOA-204ENST00000485901 OR11H4Q8NGC9 324 aa8.62□□□□□ -1.03
HLA-DOA-204ENST00000485901 PHYHIPLQ96FC7 376 aa8.62□□□□□ -1.03
HLA-DOA-204ENST00000485901 ODF3Q96PU9 254 aa8.62□□□□□ -1.03
HLA-DOA-204ENST00000485901 ARPC5LQ9BPX5 153 aa8.62□□□□□ -1.03
HLA-DOA-204ENST00000485901 ACTR3CQ9C0K3 210 aaPredicted RBP8.62□□□□□ -1.03
HLA-DOA-204ENST00000485901 Q9H3A6 140 aa8.62□□□□□ -1.03
HLA-DOA-204ENST00000485901 CYTL1Q9NRR1 136 aa8.62□□□□□ -1.03
HLA-DOA-204ENST00000485901 HMGB3O15347 200 aaKnown RBP8.61□□□□□ -1.03
HLA-DOA-204ENST00000485901 EIF3GO75821 320 aaKnown RBP eCLIP8.61□□□□□ -1.03
HLA-DOA-204ENST00000485901 STAG3L2P0CL84 134 aa8.61□□□□□ -1.03
HLA-DOA-204ENST00000485901 STAG3L3P0CL85 134 aa8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms