RNA–Protein interactions for RNA: ENST00000484799.1

SMC4-215, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 478 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-215ENST00000484799 TNRC6BQ9UPQ9 1833 aaKnown RBP1.28□□□□□ -2.2
SMC4-215ENST00000484799 RP1L1Q8IWN7 2480 aaPredicted RBP1.28□□□□□ -2.2
SMC4-215ENST00000484799 HELZ2Q9BYK8 2649 aaKnown RBP1.28□□□□□ -2.2
SMC4-215ENST00000484799 KRTAP26-1Q6PEX3 210 aa1.27□□□□□ -2.21
SMC4-215ENST00000484799 TEN1Q86WV5 123 aa1.27□□□□□ -2.21
SMC4-215ENST00000484799 OR10AG1Q8NH19 301 aa1.27□□□□□ -2.21
SMC4-215ENST00000484799 DIRC1Q969H9 104 aa1.27□□□□□ -2.21
SMC4-215ENST00000484799 LINC00052Q96N35 136 aa1.27□□□□□ -2.21
SMC4-215ENST00000484799 CDC42SE1Q9NRR8 79 aa1.27□□□□□ -2.21
SMC4-215ENST00000484799 PLXNA4Q9HCM2 1894 aa1.26□□□□□ -2.21
SMC4-215ENST00000484799 LAMB4A4D0S4 1761 aa1.26□□□□□ -2.21
SMC4-215ENST00000484799 RFX7Q2KHR2 1363 aa1.26□□□□□ -2.21
SMC4-215ENST00000484799 TRBV6-7A0A0A0MS04 114 aa1.26□□□□□ -2.21
SMC4-215ENST00000484799 TRBV6-4A0A1B0GX49 114 aa1.26□□□□□ -2.21
SMC4-215ENST00000484799 B4DSR2 109 aa1.26□□□□□ -2.21
SMC4-215ENST00000484799 J3KT08 172 aa1.26□□□□□ -2.21
SMC4-215ENST00000484799 NUPR1O60356 82 aa1.26□□□□□ -2.21
SMC4-215ENST00000484799 FREM3P0C091 2139 aa1.26□□□□□ -2.21
SMC4-215ENST00000484799 SCGB1A1P11684 91 aa1.26□□□□□ -2.21
SMC4-215ENST00000484799 FABP4P15090 132 aa1.26□□□□□ -2.21
SMC4-215ENST00000484799 COX7CP15954 63 aa1.26□□□□□ -2.21
SMC4-215ENST00000484799 RPL7P18124 248 aaKnown RBP1.26□□□□□ -2.21
SMC4-215ENST00000484799 GDF5OSQ5U4N7 250 aa1.26□□□□□ -2.21
SMC4-215ENST00000484799 Q6ZSA8 131 aa1.26□□□□□ -2.21
SMC4-215ENST00000484799 LINC00305Q7Z4B0 112 aa1.26□□□□□ -2.21
SMC4-215ENST00000484799 OR5H6Q8NGV6 325 aa1.26□□□□□ -2.21
SMC4-215ENST00000484799 BORCS5Q969J3 196 aa1.26□□□□□ -2.21
SMC4-215ENST00000484799 PRELID3AQ96N28 172 aa1.26□□□□□ -2.21
SMC4-215ENST00000484799 AIF1LQ9BQI0 150 aa1.26□□□□□ -2.21
SMC4-215ENST00000484799 TPRKBQ9Y3C4 175 aa1.26□□□□□ -2.21
SMC4-215ENST00000484799 KIAA1549Q9HCM3 1950 aa1.26□□□□□ -2.21
SMC4-215ENST00000484799 A2MP01023 1474 aa1.25□□□□□ -2.21
SMC4-215ENST00000484799 TCOF1Q13428 1488 aaKnown RBP1.25□□□□□ -2.21
SMC4-215ENST00000484799 IGLV3-32A0A0A0MS00 114 aa1.25□□□□□ -2.21
SMC4-215ENST00000484799 TRBV27A0A0K0K1C4 114 aa1.25□□□□□ -2.21
SMC4-215ENST00000484799 F8W1H4 67 aa1.25□□□□□ -2.21
SMC4-215ENST00000484799 CD2P06729 351 aa1.25□□□□□ -2.21
SMC4-215ENST00000484799 LSM3P62310 102 aaKnown RBP1.25□□□□□ -2.21
SMC4-215ENST00000484799 PSG9Q00887 426 aa1.25□□□□□ -2.21
SMC4-215ENST00000484799 VMA21Q3ZAQ7 101 aa1.25□□□□□ -2.21
SMC4-215ENST00000484799 HRCT1Q6UXD1 115 aa1.25□□□□□ -2.21
SMC4-215ENST00000484799 TMEM14EPQ6UXP3 125 aa1.25□□□□□ -2.21
SMC4-215ENST00000484799 CCL4L1Q8NHW4 92 aa1.25□□□□□ -2.21
SMC4-215ENST00000484799 OR4C12Q96R67 309 aa1.25□□□□□ -2.21
SMC4-215ENST00000484799 GGACTQ9BVM4 153 aa1.25□□□□□ -2.21
SMC4-215ENST00000484799 TAS2R7Q9NYW3 318 aa1.25□□□□□ -2.21
SMC4-215ENST00000484799 TRAPPC2LQ9UL33 140 aa1.25□□□□□ -2.21
SMC4-215ENST00000484799 HEATR1Q9H583 2144 aaKnown RBP1.25□□□□□ -2.21
SMC4-215ENST00000484799 CACNA1BQ00975 2339 aa1.24□□□□□ -2.21
SMC4-215ENST00000484799 ARAP1Q96P48 1450 aa1.24□□□□□ -2.21
SMC4-215ENST00000484799 POLEQ07864 2286 aa1.24□□□□□ -2.21
SMC4-215ENST00000484799 TRAV13-1A0A0B4J241 112 aa1.24□□□□□ -2.21
SMC4-215ENST00000484799 A0A1B0GX51 115 aa1.24□□□□□ -2.21
SMC4-215ENST00000484799 C5orf58C9J3I9 102 aa1.24□□□□□ -2.21
SMC4-215ENST00000484799 H3BRM9 83 aa1.24□□□□□ -2.21
SMC4-215ENST00000484799 SAA1P0DJI8 122 aaPredicted RBP1.24□□□□□ -2.21
SMC4-215ENST00000484799 LYNX1P0DP58 116 aa1.24□□□□□ -2.21
SMC4-215ENST00000484799 TPT1P13693 172 aaKnown RBP1.24□□□□□ -2.21
SMC4-215ENST00000484799 RPS3P23396 243 aaKnown RBP eCLIP1.24□□□□□ -2.21
SMC4-215ENST00000484799 GKN2Q86XP6 184 aa1.24□□□□□ -2.21
SMC4-215ENST00000484799 TMEM229BQ8NBD8 167 aa1.24□□□□□ -2.21
SMC4-215ENST00000484799 TMEM14CQ9P0S9 112 aa1.24□□□□□ -2.21
SMC4-215ENST00000484799 HSPB8Q9UJY1 196 aa1.24□□□□□ -2.21
SMC4-215ENST00000484799 TNRC6AQ8NDV7 1962 aaKnown RBP1.24□□□□□ -2.21
SMC4-215ENST00000484799 COL24A1Q17RW2 1714 aa1.23□□□□□ -2.21
SMC4-215ENST00000484799 BORCS7-ASMTA0A0B4J1R7 106 aa1.23□□□□□ -2.21
SMC4-215ENST00000484799 LOC107984640A0A0U1RRK4 108 aa1.23□□□□□ -2.21
SMC4-215ENST00000484799 H3BMG7 143 aa1.23□□□□□ -2.21
SMC4-215ENST00000484799 GTF2A1P52655 376 aaPredicted RBP1.23□□□□□ -2.21
SMC4-215ENST00000484799 MAXP61244 160 aa1.23□□□□□ -2.21
SMC4-215ENST00000484799 LINC00322Q6ZN03 302 aaPredicted RBP1.23□□□□□ -2.21
SMC4-215ENST00000484799 MORN4Q8NDC4 146 aa1.23□□□□□ -2.21
SMC4-215ENST00000484799 OR5AK2Q8NH90 309 aa1.23□□□□□ -2.21
SMC4-215ENST00000484799 Q8TAT8 98 aa1.23□□□□□ -2.21
SMC4-215ENST00000484799 CST11Q9H112 138 aa1.23□□□□□ -2.21
SMC4-215ENST00000484799 BATF3Q9NR55 127 aa1.23□□□□□ -2.21
SMC4-215ENST00000484799 ZFP30Q9Y2G7 519 aa1.23□□□□□ -2.21
SMC4-215ENST00000484799 DLC1Q96QB1 1528 aa1.23□□□□□ -2.21
SMC4-215ENST00000484799 CECR2Q9BXF3 1484 aa1.23□□□□□ -2.21
SMC4-215ENST00000484799 TECTAO75443 2155 aa1.23□□□□□ -2.21
SMC4-215ENST00000484799 TRAV36DV7A0A075B6V5 113 aa1.22□□□□□ -2.21
SMC4-215ENST00000484799 A0A096LPI6 279 aa1.22□□□□□ -2.21
SMC4-215ENST00000484799 DEGS1O15121 323 aa1.22□□□□□ -2.21
SMC4-215ENST00000484799 CCL25O15444 150 aa1.22□□□□□ -2.21
SMC4-215ENST00000484799 TRACP01848 142 aa1.22□□□□□ -2.21
SMC4-215ENST00000484799 ALX1Q15699 326 aa1.22□□□□□ -2.21
SMC4-215ENST00000484799 CCDC153Q494R4 210 aa1.22□□□□□ -2.21
SMC4-215ENST00000484799 HAGHLQ6PII5 290 aaPredicted RBP1.22□□□□□ -2.21
SMC4-215ENST00000484799 OR8I2Q8N0Y5 310 aa1.22□□□□□ -2.21
SMC4-215ENST00000484799 FAM19A2Q8N3H0 131 aa1.22□□□□□ -2.21
SMC4-215ENST00000484799 OR5A2Q8NGI9 324 aa1.22□□□□□ -2.21
SMC4-215ENST00000484799 NAT14Q8WUY8 206 aa1.22□□□□□ -2.21
SMC4-215ENST00000484799 PSMF1Q92530 271 aa1.22□□□□□ -2.21
SMC4-215ENST00000484799 TMEM138Q9NPI0 162 aa1.22□□□□□ -2.21
SMC4-215ENST00000484799 CBLN4Q9NTU7 201 aa1.22□□□□□ -2.21
SMC4-215ENST00000484799 OVOS2A0A0G2JMS6 1433 aa1.22□□□□□ -2.21
SMC4-215ENST00000484799 MCM3APO60318 1980 aa1.21□□□□□ -2.22
SMC4-215ENST00000484799 ALPK3Q96L96 1907 aa1.21□□□□□ -2.22
SMC4-215ENST00000484799 MGAMO43451 1857 aa1.21□□□□□ -2.22
SMC4-215ENST00000484799 FER1L6Q2WGJ9 1857 aa1.21□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms