RNA–Protein interactions for RNA: ENST00000483763.5

CDC42SE1-204, Transcript of CDC42 small effector 1, humanhuman

TSL 1 (best)

Gene CDC42SE1, Length 2,379 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-204ENST00000483763 HIST1H2BBP33778 126 aa6.82□□□□□ -1.32
CDC42SE1-204ENST00000483763 CNN1P51911 297 aaKnown RBP6.82□□□□□ -1.32
CDC42SE1-204ENST00000483763 NDUFA6P56556 154 aa6.82□□□□□ -1.32
CDC42SE1-204ENST00000483763 HIST1H2BDP58876 126 aa6.82□□□□□ -1.32
CDC42SE1-204ENST00000483763 HIST1H2BCP62807 126 aa6.82□□□□□ -1.32
CDC42SE1-204ENST00000483763 FOXL1Q12952 345 aa6.82□□□□□ -1.32
CDC42SE1-204ENST00000483763 HIST2H2BEQ16778 126 aa6.82□□□□□ -1.32
CDC42SE1-204ENST00000483763 TMEM183BQ1AE95 376 aa6.82□□□□□ -1.32
CDC42SE1-204ENST00000483763 HIST2H2BFQ5QNW6 126 aaPredicted RBP6.82□□□□□ -1.32
CDC42SE1-204ENST00000483763 C10orf99Q6UWK7 81 aa6.82□□□□□ -1.32
CDC42SE1-204ENST00000483763 LINC00322Q6ZN03 302 aaPredicted RBP6.82□□□□□ -1.32
CDC42SE1-204ENST00000483763 BAGE2Q86Y30 109 aa6.82□□□□□ -1.32
CDC42SE1-204ENST00000483763 C5orf17Q8NAS9 161 aa6.82□□□□□ -1.32
CDC42SE1-204ENST00000483763 RNASE8Q8TDE3 154 aaKnown RBP6.82□□□□□ -1.32
CDC42SE1-204ENST00000483763 FRZBQ92765 325 aa6.82□□□□□ -1.32
CDC42SE1-204ENST00000483763 HIST1H2BHQ93079 126 aa6.82□□□□□ -1.32
CDC42SE1-204ENST00000483763 HIST1H2BNQ99877 126 aa6.82□□□□□ -1.32
CDC42SE1-204ENST00000483763 HIST1H2BMQ99879 126 aa6.82□□□□□ -1.32
CDC42SE1-204ENST00000483763 FOXC2Q99958 501 aa6.82□□□□□ -1.32
CDC42SE1-204ENST00000483763 PITPNC1Q9UKF7 332 aa6.82□□□□□ -1.32
CDC42SE1-204ENST00000483763 IGHV3-49A0A0A0MS15 119 aa6.82□□□□□ -1.32
CDC42SE1-204ENST00000483763 TRBV7-1A0A0A6YYK4 115 aa6.82□□□□□ -1.32
CDC42SE1-204ENST00000483763 IGHV3-66A0A0C4DH42 116 aa6.82□□□□□ -1.32
CDC42SE1-204ENST00000483763 TGOLN2O43493 480 aa6.82□□□□□ -1.32
CDC42SE1-204ENST00000483763 ZNF207O43670 478 aaKnown RBP6.82□□□□□ -1.32
CDC42SE1-204ENST00000483763 SRP14P37108 136 aaKnown RBP6.82□□□□□ -1.32
CDC42SE1-204ENST00000483763 TPPP2P59282 170 aa6.82□□□□□ -1.32
CDC42SE1-204ENST00000483763 ATP5G2Q06055 141 aa6.82□□□□□ -1.32
CDC42SE1-204ENST00000483763 IGFL4Q6B9Z1 124 aa6.82□□□□□ -1.32
CDC42SE1-204ENST00000483763 OR4F17Q8NGA8 305 aa6.82□□□□□ -1.32
CDC42SE1-204ENST00000483763 EEF1AKMT3Q96AZ1 226 aa6.82□□□□□ -1.32
CDC42SE1-204ENST00000483763 ZNF479Q96JC4 524 aa6.82□□□□□ -1.32
CDC42SE1-204ENST00000483763 MLST8Q9BVC4 326 aa6.82□□□□□ -1.32
CDC42SE1-204ENST00000483763 PPP1R2P9O14990 202 aa6.81□□□□□ -1.32
CDC42SE1-204ENST00000483763 IGHV3-11P01762 117 aa6.81□□□□□ -1.32
CDC42SE1-204ENST00000483763 CFHR3Q02985 330 aa6.81□□□□□ -1.32
CDC42SE1-204ENST00000483763 IL17RELQ6ZVW7 336 aa6.81□□□□□ -1.32
CDC42SE1-204ENST00000483763 CSTL1Q9H114 145 aa6.81□□□□□ -1.32
CDC42SE1-204ENST00000483763 OTORQ9NRC9 128 aa6.81□□□□□ -1.32
CDC42SE1-204ENST00000483763 RABAC1Q9UI14 185 aa6.81□□□□□ -1.32
CDC42SE1-204ENST00000483763 ZNF785A8K8V0 405 aa6.81□□□□□ -1.32
CDC42SE1-204ENST00000483763 A8MWP6 167 aa6.81□□□□□ -1.32
CDC42SE1-204ENST00000483763 BUB3O43684 328 aa6.81□□□□□ -1.32
CDC42SE1-204ENST00000483763 IGLV1-40P01703 118 aa6.81□□□□□ -1.32
CDC42SE1-204ENST00000483763 TRGC1P0CF51 173 aa6.81□□□□□ -1.32
CDC42SE1-204ENST00000483763 UNQ9165/PRO28630Q6UXU0 137 aa6.81□□□□□ -1.32
CDC42SE1-204ENST00000483763 GOLT1AQ6ZVE7 132 aa6.81□□□□□ -1.32
CDC42SE1-204ENST00000483763 OR8I2Q8N0Y5 310 aa6.81□□□□□ -1.32
CDC42SE1-204ENST00000483763 DUX5Q96PT3 197 aa6.81□□□□□ -1.32
CDC42SE1-204ENST00000483763 IMMP2LQ96T52 175 aa6.81□□□□□ -1.32
CDC42SE1-204ENST00000483763 NDUFAF3Q9BU61 184 aa6.81□□□□□ -1.32
CDC42SE1-204ENST00000483763 SRD5A3Q9H8P0 318 aa6.81□□□□□ -1.32
CDC42SE1-204ENST00000483763 FAM223BA6NKX1 122 aa6.8□□□□□ -1.32
CDC42SE1-204ENST00000483763 BMPR1BO00238 502 aa6.8□□□□□ -1.32
CDC42SE1-204ENST00000483763 LTAP01374 205 aa6.8□□□□□ -1.32
CDC42SE1-204ENST00000483763 IGHG4P01861 327 aa6.8□□□□□ -1.32
CDC42SE1-204ENST00000483763 PPBPP02775 128 aa6.8□□□□□ -1.32
CDC42SE1-204ENST00000483763 S100A7P31151 101 aa6.8□□□□□ -1.32
CDC42SE1-204ENST00000483763 SLC35B1P78383 322 aa6.8□□□□□ -1.32
CDC42SE1-204ENST00000483763 IBA57Q5T440 356 aaKnown RBP6.8□□□□□ -1.32
CDC42SE1-204ENST00000483763 GFI1BQ5VTD9 330 aa6.8□□□□□ -1.32
CDC42SE1-204ENST00000483763 PRR27Q6MZM9 219 aa6.8□□□□□ -1.32
CDC42SE1-204ENST00000483763 Q6YL49 198 aa6.8□□□□□ -1.32
CDC42SE1-204ENST00000483763 FAM223AQ8IWN6 122 aa6.8□□□□□ -1.32
CDC42SE1-204ENST00000483763 GPR82Q96P67 336 aa6.8□□□□□ -1.32
CDC42SE1-204ENST00000483763 PRO1933Q9H354 126 aa6.8□□□□□ -1.32
CDC42SE1-204ENST00000483763 IL36BQ9NZH7 164 aa6.8□□□□□ -1.32
CDC42SE1-204ENST00000483763 CBY3A6NI87 242 aa6.8□□□□□ -1.32
CDC42SE1-204ENST00000483763 HOXA3O43365 443 aaPredicted RBP6.8□□□□□ -1.32
CDC42SE1-204ENST00000483763 TYMSP04818 313 aa6.8□□□□□ -1.32
CDC42SE1-204ENST00000483763 HLA-DMBP28068 263 aa6.8□□□□□ -1.32
CDC42SE1-204ENST00000483763 TCL1AP56279 114 aa6.8□□□□□ -1.32
CDC42SE1-204ENST00000483763 UBE2G1P62253 170 aa6.8□□□□□ -1.32
CDC42SE1-204ENST00000483763 KCNIP4Q6PIL6 250 aa6.8□□□□□ -1.32
CDC42SE1-204ENST00000483763 C9orf139Q6ZV77 190 aa6.8□□□□□ -1.32
CDC42SE1-204ENST00000483763 CMTM2Q8TAZ6 248 aa6.8□□□□□ -1.32
CDC42SE1-204ENST00000483763 OSTCQ9NRP0 149 aa6.8□□□□□ -1.32
CDC42SE1-204ENST00000483763 SPINK4O60575 86 aa6.79□□□□□ -1.32
CDC42SE1-204ENST00000483763 LY6G6DO95868 133 aa6.79□□□□□ -1.32
CDC42SE1-204ENST00000483763 RPL7P18124 248 aaKnown RBP6.79□□□□□ -1.32
CDC42SE1-204ENST00000483763 RAB9AP51151 201 aa6.79□□□□□ -1.32
CDC42SE1-204ENST00000483763 SRSF2Q01130 221 aaKnown RBP6.79□□□□□ -1.32
CDC42SE1-204ENST00000483763 SCGB2A2Q13296 93 aa6.79□□□□□ -1.32
CDC42SE1-204ENST00000483763 JOSD1Q15040 202 aaPredicted RBP6.79□□□□□ -1.32
CDC42SE1-204ENST00000483763 FBN1P35555 2871 aaKnown RBP6.79□□□□□ -1.32
CDC42SE1-204ENST00000483763 SCGB2A1O75556 95 aa6.79□□□□□ -1.32
CDC42SE1-204ENST00000483763 ARL3P36405 182 aa6.79□□□□□ -1.32
CDC42SE1-204ENST00000483763 SHISA2Q6UWI4 295 aa6.79□□□□□ -1.32
CDC42SE1-204ENST00000483763 FMC1Q96HJ9 113 aa6.79□□□□□ -1.32
CDC42SE1-204ENST00000483763 SERTAD4Q9NUC0 356 aa6.79□□□□□ -1.32
CDC42SE1-204ENST00000483763 VPREB3Q9UKI3 123 aa6.79□□□□□ -1.32
CDC42SE1-204ENST00000483763 ZNF705GA8MUZ8 300 aaPredicted RBP6.78□□□□□ -1.32
CDC42SE1-204ENST00000483763 ZNF705FA8MVS1 300 aaPredicted RBP6.78□□□□□ -1.32
CDC42SE1-204ENST00000483763 DIRC3C9JPN6 131 aa6.78□□□□□ -1.32
CDC42SE1-204ENST00000483763 BRI3O95415 125 aa6.78□□□□□ -1.32
CDC42SE1-204ENST00000483763 PDE6HQ13956 83 aa6.78□□□□□ -1.32
CDC42SE1-204ENST00000483763 ACTL10Q5JWF8 245 aa6.78□□□□□ -1.32
CDC42SE1-204ENST00000483763 PRNTQ86SH4 94 aa6.78□□□□□ -1.32
CDC42SE1-204ENST00000483763 Q86TA4 180 aa6.78□□□□□ -1.32
CDC42SE1-204ENST00000483763 LYPD1Q8N2G4 141 aa6.78□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms