RNA–Protein interactions for RNA: ENST00000481739.1

RXRA-202, Transcript of retinoid X receptor alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RXRA, Length 1,846 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RXRA-202ENST00000481739 GBGT1Q8N5D6 347 aa12.18□□□□□ -0.46
RXRA-202ENST00000481739 SMR3AQ99954 134 aa12.18□□□□□ -0.46
RXRA-202ENST00000481739 SLC50A1Q9BRV3 221 aa12.18□□□□□ -0.46
RXRA-202ENST00000481739 PSG8Q9UQ74 426 aa12.18□□□□□ -0.46
RXRA-202ENST00000481739 HOXA3O43365 443 aaPredicted RBP12.17□□□□□ -0.46
RXRA-202ENST00000481739 TCL1AP56279 114 aa12.17□□□□□ -0.46
RXRA-202ENST00000481739 TPPP2P59282 170 aa12.17□□□□□ -0.46
RXRA-202ENST00000481739 DNLZQ5SXM8 178 aa12.17□□□□□ -0.46
RXRA-202ENST00000481739 SIGLECL1Q8N7X8 197 aa12.17□□□□□ -0.46
RXRA-202ENST00000481739 SGK494Q96LW2 274 aa12.17□□□□□ -0.46
RXRA-202ENST00000481739 HIST1H2BLQ99880 126 aa12.17□□□□□ -0.46
RXRA-202ENST00000481739 CLEC5AQ9NY25 188 aa12.17□□□□□ -0.46
RXRA-202ENST00000481739 TRAV8-1A0A0A6YYK1 113 aa12.16□□□□□ -0.46
RXRA-202ENST00000481739 S100A12P80511 92 aa12.16□□□□□ -0.46
RXRA-202ENST00000481739 TMEM136Q6ZRR5 245 aa12.16□□□□□ -0.46
RXRA-202ENST00000481739 COX8CQ7Z4L0 72 aa12.16□□□□□ -0.46
RXRA-202ENST00000481739 NUP35Q8NFH5 326 aa12.16□□□□□ -0.46
RXRA-202ENST00000481739 NEU1Q99519 415 aa12.16□□□□□ -0.46
RXRA-202ENST00000481739 BAHCC1Q9P281 2608 aa12.16□□□□□ -0.46
RXRA-202ENST00000481739 CLPSL1A2RUU4 121 aa12.16□□□□□ -0.46
RXRA-202ENST00000481739 HIGD1CA8MV81 97 aa12.16□□□□□ -0.46
RXRA-202ENST00000481739 NDUFA4O00483 81 aa12.16□□□□□ -0.46
RXRA-202ENST00000481739 CA1P00915 261 aaPredicted RBP12.16□□□□□ -0.46
RXRA-202ENST00000481739 CT45A10P0DMU9 189 aa12.16□□□□□ -0.46
RXRA-202ENST00000481739 FABP4P15090 132 aa12.16□□□□□ -0.46
RXRA-202ENST00000481739 ARL3P36405 182 aa12.16□□□□□ -0.46
RXRA-202ENST00000481739 SAPCD1Q5SSQ6 148 aa12.16□□□□□ -0.46
RXRA-202ENST00000481739 C16orf54Q6UWD8 224 aa12.16□□□□□ -0.46
RXRA-202ENST00000481739 OR10D4PQ8NGN7 298 aa12.16□□□□□ -0.46
RXRA-202ENST00000481739 TMEM18Q96B42 140 aa12.16□□□□□ -0.46
RXRA-202ENST00000481739 PACRGQ96M98 296 aaPredicted RBP12.16□□□□□ -0.46
RXRA-202ENST00000481739 VPREB3Q9UKI3 123 aa12.16□□□□□ -0.46
RXRA-202ENST00000481739 U3KQE9 123 aa12.16□□□□□ -0.46
RXRA-202ENST00000481739 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP12.15□□□□□ -0.46
RXRA-202ENST00000481739 TMEM89A2RUT3 159 aa12.15□□□□□ -0.46
RXRA-202ENST00000481739 IGLV1-40P01703 118 aa12.15□□□□□ -0.46
RXRA-202ENST00000481739 CRISP2P16562 243 aa12.15□□□□□ -0.46
RXRA-202ENST00000481739 BLCAPP62952 87 aa12.15□□□□□ -0.46
RXRA-202ENST00000481739 SMAD5-AS1Q9Y6J3 95 aa12.15□□□□□ -0.46
RXRA-202ENST00000481739 ZNF785A8K8V0 405 aa12.14□□□□□ -0.47
RXRA-202ENST00000481739 M0R3E3 92 aa12.14□□□□□ -0.47
RXRA-202ENST00000481739 LY6G6DO95868 133 aa12.14□□□□□ -0.47
RXRA-202ENST00000481739 Q0VG73 95 aa12.14□□□□□ -0.47
RXRA-202ENST00000481739 PDZD11Q5EBL8 140 aa12.14□□□□□ -0.47
RXRA-202ENST00000481739 MRPL53Q96EL3 112 aaKnown RBP12.14□□□□□ -0.47
RXRA-202ENST00000481739 DUX5Q96PT3 197 aa12.14□□□□□ -0.47
RXRA-202ENST00000481739 PRDM13Q9H4Q3 707 aa12.14□□□□□ -0.47
RXRA-202ENST00000481739 LINC00527Q9UJ94 153 aa12.14□□□□□ -0.47
RXRA-202ENST00000481739 ANK3Q12955 4377 aaKnown RBP12.14□□□□□ -0.47
RXRA-202ENST00000481739 IGHV3-35A0A0C4DH35 117 aa12.14□□□□□ -0.47
RXRA-202ENST00000481739 RBAKDNA6NC62 111 aa12.14□□□□□ -0.47
RXRA-202ENST00000481739 CFHR3Q02985 330 aa12.14□□□□□ -0.47
RXRA-202ENST00000481739 Q6AWC8 147 aa12.14□□□□□ -0.47
RXRA-202ENST00000481739 MRPL54Q6P161 138 aaKnown RBP12.14□□□□□ -0.47
RXRA-202ENST00000481739 RBPMS2Q6ZRY4 209 aaKnown RBP12.14□□□□□ -0.47
RXRA-202ENST00000481739 CHEK1O14757 476 aa12.13□□□□□ -0.47
RXRA-202ENST00000481739 AMBPP02760 352 aa12.13□□□□□ -0.47
RXRA-202ENST00000481739 FOXA3P55318 350 aaPredicted RBP12.13□□□□□ -0.47
RXRA-202ENST00000481739 RAB4BP61018 213 aa12.13□□□□□ -0.47
RXRA-202ENST00000481739 OR10J3Q5JRS4 329 aa12.13□□□□□ -0.47
RXRA-202ENST00000481739 LINC00322Q6ZN03 302 aaPredicted RBP12.13□□□□□ -0.47
RXRA-202ENST00000481739 A0A1B0GXF2 115 aa12.12□□□□□ -0.47
RXRA-202ENST00000481739 PF4V1P10720 104 aa12.12□□□□□ -0.47
RXRA-202ENST00000481739 ESDP10768 282 aa12.12□□□□□ -0.47
RXRA-202ENST00000481739 HBBP68871 147 aa12.12□□□□□ -0.47
RXRA-202ENST00000481739 SLC35B1P78383 322 aa12.12□□□□□ -0.47
RXRA-202ENST00000481739 ZC2HC1AQ96GY0 325 aa12.12□□□□□ -0.47
RXRA-202ENST00000481739 NOL4LQ96MY1 436 aaPredicted RBP12.12□□□□□ -0.47
RXRA-202ENST00000481739 NIT2Q9NQR4 276 aa12.12□□□□□ -0.47
RXRA-202ENST00000481739 SPINK4O60575 86 aa12.11□□□□□ -0.47
RXRA-202ENST00000481739 APCSP02743 223 aa12.11□□□□□ -0.47
RXRA-202ENST00000481739 Q6ZS46 218 aa12.11□□□□□ -0.47
RXRA-202ENST00000481739 OR2D3Q8NGH3 330 aa12.11□□□□□ -0.47
RXRA-202ENST00000481739 NDFIP1Q9BT67 221 aa12.11□□□□□ -0.47
RXRA-202ENST00000481739 A0A1W2PS18 150 aa12.11□□□□□ -0.47
RXRA-202ENST00000481739 IGHG4P01861 327 aa12.11□□□□□ -0.47
RXRA-202ENST00000481739 SCGB2A2Q13296 93 aa12.11□□□□□ -0.47
RXRA-202ENST00000481739 PYY3Q5JQD4 70 aa12.11□□□□□ -0.47
RXRA-202ENST00000481739 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa12.11□□□□□ -0.47
RXRA-202ENST00000481739 TMEM160Q9NX00 188 aa12.11□□□□□ -0.47
RXRA-202ENST00000481739 IGHV3OR16-8A0A075B7F1 116 aa12.1□□□□□ -0.47
RXRA-202ENST00000481739 A0A1B0GW15 77 aa12.1□□□□□ -0.47
RXRA-202ENST00000481739 LCN12Q6JVE5 192 aa12.1□□□□□ -0.47
RXRA-202ENST00000481739 Q71RC1 249 aaPredicted RBP12.1□□□□□ -0.47
RXRA-202ENST00000481739 SRD5A1P18405 259 aa12.09□□□□□ -0.47
RXRA-202ENST00000481739 PAFAH1B2P68402 229 aa12.09□□□□□ -0.47
RXRA-202ENST00000481739 FAM162BQ5T6X4 162 aa12.09□□□□□ -0.47
RXRA-202ENST00000481739 GTSF1Q8WW33 167 aa12.09□□□□□ -0.47
RXRA-202ENST00000481739 PRR25Q96S07 402 aa12.09□□□□□ -0.47
RXRA-202ENST00000481739 NPFFR1Q9GZQ6 430 aa12.09□□□□□ -0.47
RXRA-202ENST00000481739 HIVEP2P31629 2446 aa12.09□□□□□ -0.47
RXRA-202ENST00000481739 SETXQ7Z333 2677 aaKnown RBP12.09□□□□□ -0.47
RXRA-202ENST00000481739 FRMD6-AS1P0C7T7 363 aa12.09□□□□□ -0.47
RXRA-202ENST00000481739 BMI1P35226 326 aa12.09□□□□□ -0.47
RXRA-202ENST00000481739 BAGE3Q86Y29 109 aa12.09□□□□□ -0.47
RXRA-202ENST00000481739 TMEM86BQ8N661 226 aa12.09□□□□□ -0.47
RXRA-202ENST00000481739 OR4X2Q8NGF9 303 aa12.09□□□□□ -0.47
RXRA-202ENST00000481739 GLMPQ8WWB7 406 aa12.09□□□□□ -0.47
RXRA-202ENST00000481739 MTORP42345 2549 aa12.08□□□□□ -0.48
RXRA-202ENST00000481739 IGKV2-40A0A087WW87 121 aaPredicted RBP12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms