RNA–Protein interactions for RNA: ENST00000480614.1

VEGFA-212, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 12,167 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-212ENST00000480614 SHISA3A0PJX4 238 aa7.81□□□□□ -1.16
VEGFA-212ENST00000480614 SH2D1AO60880 128 aa7.81□□□□□ -1.16
VEGFA-212ENST00000480614 TBX6O95947 436 aaPredicted RBP7.81□□□□□ -1.16
VEGFA-212ENST00000480614 SUMO4Q6EEV6 95 aa7.81□□□□□ -1.16
VEGFA-212ENST00000480614 A0A0U1RRA0 63 aa7.81□□□□□ -1.16
VEGFA-212ENST00000480614 SYS1-DBNDD2H3BUS1 97 aa7.81□□□□□ -1.16
VEGFA-212ENST00000480614 TMEM75Q8N9X5 138 aa7.81□□□□□ -1.16
VEGFA-212ENST00000480614 BOD1L2Q8IYS8 172 aa7.81□□□□□ -1.16
VEGFA-212ENST00000480614 USP24Q9UPU5 2620 aa7.81□□□□□ -1.16
VEGFA-212ENST00000480614 FAM231BA6NCW3 169 aa7.81□□□□□ -1.16
VEGFA-212ENST00000480614 TGFBR3LH3BV60 316 aa7.81□□□□□ -1.16
VEGFA-212ENST00000480614 H0YJW9 148 aa7.81□□□□□ -1.16
VEGFA-212ENST00000480614 SCRT1Q9BWW7 348 aa7.8□□□□□ -1.16
VEGFA-212ENST00000480614 WFDC1Q9HC57 220 aa7.8□□□□□ -1.16
VEGFA-212ENST00000480614 MMP23AO75900 390 aa7.8□□□□□ -1.16
VEGFA-212ENST00000480614 SIGLEC9Q9Y336 463 aa7.8□□□□□ -1.16
VEGFA-212ENST00000480614 COL4A5P29400 1685 aa7.8□□□□□ -1.16
VEGFA-212ENST00000480614 BUB1B-PAK6H3BSN5 160 aa7.8□□□□□ -1.16
VEGFA-212ENST00000480614 H3BUX3 64 aa7.8□□□□□ -1.16
VEGFA-212ENST00000480614 FCN3O75636 299 aa7.8□□□□□ -1.16
VEGFA-212ENST00000480614 C14orf178Q8N769 122 aaPredicted RBP7.8□□□□□ -1.16
VEGFA-212ENST00000480614 C3orf56Q8N813 242 aa7.8□□□□□ -1.16
VEGFA-212ENST00000480614 COX11Q9Y6N1 276 aa7.8□□□□□ -1.16
VEGFA-212ENST00000480614 A8MWP6 167 aa7.8□□□□□ -1.16
VEGFA-212ENST00000480614 LTBRP36941 435 aa7.8□□□□□ -1.16
VEGFA-212ENST00000480614 SOCS3O14543 225 aa7.8□□□□□ -1.16
VEGFA-212ENST00000480614 E9PQ18 207 aa7.8□□□□□ -1.16
VEGFA-212ENST00000480614 PPIFP30405 207 aaKnown RBP7.8□□□□□ -1.16
VEGFA-212ENST00000480614 KIR3DS1Q14943 382 aa7.8□□□□□ -1.16
VEGFA-212ENST00000480614 NTN3O00634 580 aaPredicted RBP7.79□□□□□ -1.16
VEGFA-212ENST00000480614 TMEM219Q86XT9 240 aa7.79□□□□□ -1.16
VEGFA-212ENST00000480614 NCR2O95944 276 aa7.79□□□□□ -1.16
VEGFA-212ENST00000480614 CD24P25063 80 aa7.79□□□□□ -1.16
VEGFA-212ENST00000480614 OCIAD2Q56VL3 154 aa7.79□□□□□ -1.16
VEGFA-212ENST00000480614 GGNQ86UU5 652 aa7.79□□□□□ -1.16
VEGFA-212ENST00000480614 ZNF319Q9P2F9 582 aa7.79□□□□□ -1.16
VEGFA-212ENST00000480614 TRBV25-1A0A075B6N4 114 aa7.79□□□□□ -1.16
VEGFA-212ENST00000480614 APOC4P55056 127 aa7.79□□□□□ -1.16
VEGFA-212ENST00000480614 GAGE12BA1L429 117 aa7.79□□□□□ -1.16
VEGFA-212ENST00000480614 LHFPL1Q86WI0 220 aa7.79□□□□□ -1.16
VEGFA-212ENST00000480614 SHANK2-AS3Q9BTD1 123 aa7.79□□□□□ -1.16
VEGFA-212ENST00000480614 GAGE2AQ6NT46 116 aa7.79□□□□□ -1.16
VEGFA-212ENST00000480614 Q86TA4 180 aa7.79□□□□□ -1.16
VEGFA-212ENST00000480614 ZNF561-AS1K7EIQ3 104 aa7.79□□□□□ -1.16
VEGFA-212ENST00000480614 ZNF492Q9P255 531 aa7.79□□□□□ -1.16
VEGFA-212ENST00000480614 ZNF474Q6S9Z5 364 aaPredicted RBP7.79□□□□□ -1.16
VEGFA-212ENST00000480614 TMEM126AQ9H061 195 aa7.78□□□□□ -1.16
VEGFA-212ENST00000480614 MCRIP2Q9BUT9 160 aaKnown RBP7.78□□□□□ -1.16
VEGFA-212ENST00000480614 LCNL1Q6ZST4 164 aa7.78□□□□□ -1.16
VEGFA-212ENST00000480614 IGHV3-73A0A0B4J1V6 119 aa7.78□□□□□ -1.16
VEGFA-212ENST00000480614 TRAV13-2A0A0B4J235 113 aa7.78□□□□□ -1.16
VEGFA-212ENST00000480614 UTF1Q5T230 341 aa7.78□□□□□ -1.16
VEGFA-212ENST00000480614 CD5LO43866 347 aa7.78□□□□□ -1.16
VEGFA-212ENST00000480614 FASNP49327 2511 aaKnown RBP7.78□□□□□ -1.16
VEGFA-212ENST00000480614 A0A0A6YYD4 124 aa7.78□□□□□ -1.16
VEGFA-212ENST00000480614 H0YIZ8 118 aa7.78□□□□□ -1.16
VEGFA-212ENST00000480614 GAFA1Q96PS6 74 aa7.78□□□□□ -1.16
VEGFA-212ENST00000480614 LIME1Q9H400 295 aa7.78□□□□□ -1.16
VEGFA-212ENST00000480614 POLQO75417 2590 aa7.78□□□□□ -1.16
VEGFA-212ENST00000480614 MLNRO43193 412 aa7.77□□□□□ -1.16
VEGFA-212ENST00000480614 PYY3Q5JQD4 70 aa7.77□□□□□ -1.16
VEGFA-212ENST00000480614 THAP8Q8NA92 274 aa7.77□□□□□ -1.16
VEGFA-212ENST00000480614 NDUFS6O75380 124 aaKnown RBP7.77□□□□□ -1.17
VEGFA-212ENST00000480614 ZC2HC1BQ5TFG8 222 aa7.77□□□□□ -1.17
VEGFA-212ENST00000480614 TMEM158Q8WZ71 300 aa7.77□□□□□ -1.17
VEGFA-212ENST00000480614 LYPD3O95274 346 aa7.77□□□□□ -1.17
VEGFA-212ENST00000480614 YPEL3P61236 119 aaPredicted RBP7.77□□□□□ -1.17
VEGFA-212ENST00000480614 ZNF329Q86UD4 541 aa7.77□□□□□ -1.17
VEGFA-212ENST00000480614 A6NNC1 897 aa7.77□□□□□ -1.17
VEGFA-212ENST00000480614 PPDPFLQ8WWR9 84 aa7.77□□□□□ -1.17
VEGFA-212ENST00000480614 PRTN3P24158 256 aa7.77□□□□□ -1.17
VEGFA-212ENST00000480614 SRSF3P84103 164 aaKnown RBP7.77□□□□□ -1.17
VEGFA-212ENST00000480614 DEFB121Q5J5C9 76 aa7.77□□□□□ -1.17
VEGFA-212ENST00000480614 UBL5Q9BZL1 73 aa7.77□□□□□ -1.17
VEGFA-212ENST00000480614 LTBP1Q14766 1721 aa7.77□□□□□ -1.17
VEGFA-212ENST00000480614 DAD1P61803 113 aa7.77□□□□□ -1.17
VEGFA-212ENST00000480614 FLVCR1-AS1Q8TAF5 88 aa7.77□□□□□ -1.17
VEGFA-212ENST00000480614 PRDM6Q9NQX0 595 aa7.77□□□□□ -1.17
VEGFA-212ENST00000480614 Q6P435 159 aa7.77□□□□□ -1.17
VEGFA-212ENST00000480614 TNRC6BQ9UPQ9 1833 aaKnown RBP7.77□□□□□ -1.17
VEGFA-212ENST00000480614 NABP1Q96AH0 204 aa7.77□□□□□ -1.17
VEGFA-212ENST00000480614 IGKV1D-8A0A087WSZ0 117 aa7.77□□□□□ -1.17
VEGFA-212ENST00000480614 UBE2WQ96B02 151 aa7.77□□□□□ -1.17
VEGFA-212ENST00000480614 TMEM243Q9BU79 118 aa7.77□□□□□ -1.17
VEGFA-212ENST00000480614 CHD8Q9HCK8 2581 aa7.76□□□□□ -1.17
VEGFA-212ENST00000480614 NPC2P61916 151 aa7.76□□□□□ -1.17
VEGFA-212ENST00000480614 FOXF2Q12947 444 aa7.76□□□□□ -1.17
VEGFA-212ENST00000480614 ZNF114Q8NC26 417 aa7.76□□□□□ -1.17
VEGFA-212ENST00000480614 RHPN1-AS1Q9BWJ2 59 aa7.76□□□□□ -1.17
VEGFA-212ENST00000480614 IGHV2-70P01814 119 aa7.76□□□□□ -1.17
VEGFA-212ENST00000480614 COL4A1P02462 1669 aa7.76□□□□□ -1.17
VEGFA-212ENST00000480614 F5H768 121 aa7.76□□□□□ -1.17
VEGFA-212ENST00000480614 I3L3M4 83 aa7.76□□□□□ -1.17
VEGFA-212ENST00000480614 SPINK8P0C7L1 97 aa7.76□□□□□ -1.17
VEGFA-212ENST00000480614 CRIM1Q9NZV1 1036 aa7.76□□□□□ -1.17
VEGFA-212ENST00000480614 FLG2Q5D862 2391 aaPredicted RBP7.76□□□□□ -1.17
VEGFA-212ENST00000480614 A0A087X0K7 114 aa7.76□□□□□ -1.17
VEGFA-212ENST00000480614 TRAV13-1A0A0B4J241 112 aa7.76□□□□□ -1.17
VEGFA-212ENST00000480614 LYL1P12980 280 aa7.76□□□□□ -1.17
VEGFA-212ENST00000480614 DSCR8Q96T75 97 aa7.76□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms